RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W TSC3Q3E790 80 aa2.44□□□□□ -2.02
BCD1YHR040W YLR236CA0A023PZG4 107 aa2.43□□□□□ -2.02
BCD1YHR040W PBI2P0CT04 75 aaKnown RBP2.43□□□□□ -2.02
BCD1YHR040W DSE2P38844 325 aa2.43□□□□□ -2.02
BCD1YHR040W BET1P22804 142 aa2.42□□□□□ -2.02
BCD1YHR040W IRC21Q04772 201 aa2.42□□□□□ -2.02
BCD1YHR040W YFL041W-AQ3E817 63 aa2.42□□□□□ -2.02
BCD1YHR040W YFR032C-BQ8TGU2 87 aa2.42□□□□□ -2.02
BCD1YHR040W YLR156WP0CE96 114 aa2.41□□□□□ -2.02
BCD1YHR040W YLR159WP0CE97 114 aa2.41□□□□□ -2.02
BCD1YHR040W YLR161WP0CE98 114 aa2.41□□□□□ -2.02
BCD1YHR040W YJR107C-AP0CT86 78 aa2.41□□□□□ -2.02
BCD1YHR040W UBC4P15731 148 aa2.41□□□□□ -2.02
BCD1YHR040W YAL064WP39711 94 aa2.41□□□□□ -2.02
BCD1YHR040W YFL065CP43539 102 aa2.41□□□□□ -2.02
BCD1YHR040W YPR203WQ08994 102 aa2.41□□□□□ -2.02
BCD1YHR040W EMC6Q12431 108 aa2.41□□□□□ -2.02
BCD1YHR040W YAR023CD6VPM8 179 aa2.4□□□□□ -2.03
BCD1YHR040W RAD6P06104 172 aa2.4□□□□□ -2.03
BCD1YHR040W KRE1P17260 313 aa2.4□□□□□ -2.03
BCD1YHR040W YHL042WP38729 150 aa2.4□□□□□ -2.03
BCD1YHR040W RSM19P53733 91 aaPredicted RBP2.4□□□□□ -2.03
BCD1YHR040W Q0032Q9ZZX7 96 aa2.4□□□□□ -2.03
BCD1YHR040W YER039C-AP0CD97 72 aa2.39□□□□□ -2.03
BCD1YHR040W YHR125WP38831 101 aa2.39□□□□□ -2.03
BCD1YHR040W SNA2P56508 79 aa2.39□□□□□ -2.03
BCD1YHR040W YDR381C-AQ3E6R5 114 aa2.39□□□□□ -2.03
BCD1YHR040W YLR412C-AQ3E742 68 aa2.39□□□□□ -2.03
BCD1YHR040W YLR361C-AQ3E795 98 aa2.39□□□□□ -2.03
BCD1YHR040W ECM12O13529 151 aa2.38□□□□□ -2.03
BCD1YHR040W FYV5P25585 152 aa2.38□□□□□ -2.03
BCD1YHR040W ATP18P81450 59 aa2.38□□□□□ -2.03
BCD1YHR040W YDR029WQ12111 104 aa2.38□□□□□ -2.03
BCD1YHR040W YNL042W-BQ3E7Z2 85 aa2.38□□□□□ -2.03
BCD1YHR040W YLL066W-BQ8TGJ7 56 aa2.38□□□□□ -2.03
BCD1YHR040W YEL045CP32616 141 aa2.37□□□□□ -2.03
BCD1YHR040W YSY6P38374 65 aa2.37□□□□□ -2.03
BCD1YHR040W TDA2P40045 126 aa2.37□□□□□ -2.03
BCD1YHR040W MPC3P53311 146 aa2.37□□□□□ -2.03
BCD1YHR040W YOR034C-AQ3E735 80 aa2.37□□□□□ -2.03
BCD1YHR040W YJL127C-BQ3E828 52 aa2.37□□□□□ -2.03
BCD1YHR040W COF1Q03048 143 aaKnown RBP2.36□□□□□ -2.03
BCD1YHR040W YOR304C-AO14468 76 aa2.35□□□□□ -2.03
BCD1YHR040W AUA1P32450 94 aa2.35□□□□□ -2.03
BCD1YHR040W YRA2P36036 203 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
BCD1YHR040W YOL014WQ08110 124 aa2.35□□□□□ -2.03
BCD1YHR040W YOR268CQ08734 132 aa2.35□□□□□ -2.03
BCD1YHR040W YBR230W-AQ3E762 66 aa2.35□□□□□ -2.03
BCD1YHR040W YLR307C-AQ3E825 87 aa2.35□□□□□ -2.03
BCD1YHR040W YML100W-AQ8TGT0 57 aa2.35□□□□□ -2.03
BCD1YHR040W GAT4P40569 121 aa2.34□□□□□ -2.03
BCD1YHR040W YGL193CP53097 103 aa2.34□□□□□ -2.03
BCD1YHR040W YGR039WP53225 103 aa2.34□□□□□ -2.03
BCD1YHR040W RRT15Q3E811 62 aa2.34□□□□□ -2.03
BCD1YHR040W YFR009W-AP0C5M9 85 aa2.33□□□□□ -2.04
BCD1YHR040W GIS2P53849 153 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
BCD1YHR040W DDR2P89113 61 aa2.33□□□□□ -2.04
BCD1YHR040W YLR285C-AQ3E771 56 aa2.33□□□□□ -2.04
BCD1YHR040W YPL038W-AQ3E7B4 63 aa2.33□□□□□ -2.04
BCD1YHR040W RPL36BO14455 100 aaKnown RBP2.32□□□□□ -2.04
BCD1YHR040W YDR034C-AP0C289 58 aa2.32□□□□□ -2.04
BCD1YHR040W YCR050CP25630 102 aa2.32□□□□□ -2.04
BCD1YHR040W COX23P38824 151 aa2.32□□□□□ -2.04
BCD1YHR040W RPL38P49167 78 aaKnown RBP2.32□□□□□ -2.04
BCD1YHR040W YOR072WQ08486 104 aa2.32□□□□□ -2.04
BCD1YHR040W ATP20Q12233 115 aa2.32□□□□□ -2.04
BCD1YHR040W YHR032W-AP0C5N6 59 aa2.31□□□□□ -2.04
BCD1YHR040W TOM6P33448 61 aa2.31□□□□□ -2.04
BCD1YHR040W ICS3P47034 131 aa2.31□□□□□ -2.04
BCD1YHR040W RSM18P40033 138 aa2.3□□□□□ -2.04
BCD1YHR040W YOR314WQ12506 109 aa2.3□□□□□ -2.04
BCD1YHR040W YDR119W-AQ2V2P9 66 aa2.3□□□□□ -2.04
BCD1YHR040W YGR121W-AQ3E816 71 aa2.3□□□□□ -2.04
BCD1YHR040W YHR213W-BQ8TGK1 99 aa2.3□□□□□ -2.04
BCD1YHR040W YHL018WP38744 120 aaPredicted RBP2.29□□□□□ -2.04
BCD1YHR040W SPG1P50088 95 aa2.29□□□□□ -2.04
BCD1YHR040W BSC4P53841 131 aa2.29□□□□□ -2.04
BCD1YHR040W LCL1Q02786 101 aa2.29□□□□□ -2.04
BCD1YHR040W YJL133C-AQ3E7A3 74 aa2.29□□□□□ -2.04
BCD1YHR040W YHR007C-AQ07074 71 aa2.28□□□□□ -2.04
BCD1YHR040W YIR021W-AQ3E739 70 aa2.28□□□□□ -2.04
BCD1YHR040W YLR157W-DP0CE99 70 aa2.26□□□□□ -2.05
BCD1YHR040W EDC1P53080 175 aaPredicted RBP2.26□□□□□ -2.05
BCD1YHR040W YLR162WQ06235 118 aa2.26□□□□□ -2.05
BCD1YHR040W YER187WP40102 141 aa2.25□□□□□ -2.05
BCD1YHR040W SBH1P52870 82 aa2.25□□□□□ -2.05
BCD1YHR040W YPR195CQ06594 109 aa2.25□□□□□ -2.05
BCD1YHR040W FYV12Q08559 129 aa2.25□□□□□ -2.05
BCD1YHR040W YDR182W-AQ3E796 67 aa2.25□□□□□ -2.05
BCD1YHR040W MIC10Q96VH5 97 aa2.25□□□□□ -2.05
BCD1YHR040W AIM4P38305 123 aaPredicted RBP2.24□□□□□ -2.05
BCD1YHR040W YOL097W-AQ3E7Y9 61 aa2.24□□□□□ -2.05
BCD1YHR040W YNL277W-AQ3E7Z0 62 aa2.24□□□□□ -2.05
BCD1YHR040W RPL36AP05745 100 aaPredicted RBP2.23□□□□□ -2.05
BCD1YHR040W DDR48P18899 430 aaKnown RBP2.22□□□□□ -2.05
BCD1YHR040W YAR064WP39563 99 aa2.22□□□□□ -2.05
BCD1YHR040W LIP1Q03579 150 aa2.22□□□□□ -2.05
BCD1YHR040W YOR381W-AQ3E804 55 aa2.22□□□□□ -2.05
BCD1YHR040W YIL102CP40488 101 aa2.21□□□□□ -2.06
BCD1YHR040W LCL2Q08045 131 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms