RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W YPL257WQ08974 193 aa2.96□□□□□ -1.94
VPS29YHR012W SLO1Q3E784 85 aa2.96□□□□□ -1.94
VPS29YHR012W YNL042W-BQ3E7Z2 85 aa2.96□□□□□ -1.94
VPS29YHR012W ATX1P38636 73 aa2.95□□□□□ -1.94
VPS29YHR012W DSE2P38844 325 aa2.95□□□□□ -1.94
VPS29YHR012W OST2P46964 130 aa2.95□□□□□ -1.94
VPS29YHR012W RPA12P32529 125 aaKnown RBP2.94□□□□□ -1.94
VPS29YHR012W IRC21Q04772 201 aa2.94□□□□□ -1.94
VPS29YHR012W YOR034C-AQ3E735 80 aa2.94□□□□□ -1.94
VPS29YHR012W KRE1P17260 313 aa2.93□□□□□ -1.94
VPS29YHR012W YLR236CA0A023PZG4 107 aa2.92□□□□□ -1.94
VPS29YHR012W INO4P13902 151 aa2.92□□□□□ -1.94
VPS29YHR012W ICY1Q04329 127 aa2.92□□□□□ -1.94
VPS29YHR012W YCR085WP25650 117 aa2.91□□□□□ -1.94
VPS29YHR012W MSA2P36157 363 aa2.91□□□□□ -1.94
VPS29YHR012W YHL018WP38744 120 aaPredicted RBP2.91□□□□□ -1.94
VPS29YHR012W YIL002W-AQ3E7Z5 69 aa2.91□□□□□ -1.94
VPS29YHR012W YJL127C-BQ3E828 52 aa2.91□□□□□ -1.94
VPS29YHR012W FYV5P25585 152 aa2.9□□□□□ -1.95
VPS29YHR012W YAL063C-AQ3E791 96 aa2.9□□□□□ -1.95
VPS29YHR012W MPC3P53311 146 aa2.89□□□□□ -1.95
VPS29YHR012W BSC4P53841 131 aa2.89□□□□□ -1.95
VPS29YHR012W YBR230W-AQ3E762 66 aa2.89□□□□□ -1.95
VPS29YHR012W PBI2P0CT04 75 aaKnown RBP2.88□□□□□ -1.95
VPS29YHR012W YJR107C-AP0CT86 78 aa2.88□□□□□ -1.95
VPS29YHR012W ISD11Q6Q560 94 aa2.88□□□□□ -1.95
VPS29YHR012W HOT13P36078 116 aa2.87□□□□□ -1.95
VPS29YHR012W SFT1P43682 97 aa2.87□□□□□ -1.95
VPS29YHR012W SKI6P46948 246 aaPredicted RBP2.87□□□□□ -1.95
VPS29YHR012W YDR381C-AQ3E6R5 114 aa2.87□□□□□ -1.95
VPS29YHR012W YFL065CP43539 102 aa2.86□□□□□ -1.95
VPS29YHR012W YHR007C-AQ07074 71 aa2.86□□□□□ -1.95
VPS29YHR012W YOR072WQ08486 104 aa2.86□□□□□ -1.95
VPS29YHR012W YPR203WQ08994 102 aa2.86□□□□□ -1.95
VPS29YHR012W BET1P22804 142 aa2.85□□□□□ -1.95
VPS29YHR012W ATP18P81450 59 aa2.85□□□□□ -1.95
VPS29YHR012W TSC3Q3E790 80 aa2.85□□□□□ -1.95
VPS29YHR012W YHR139C-AO13536 103 aa2.84□□□□□ -1.95
VPS29YHR012W RPL36BO14455 100 aaKnown RBP2.84□□□□□ -1.95
VPS29YHR012W COX7P10174 60 aa2.84□□□□□ -1.95
VPS29YHR012W YHL005CP38752 130 aa2.84□□□□□ -1.95
VPS29YHR012W YFL041W-AQ3E817 63 aa2.84□□□□□ -1.95
VPS29YHR012W YBR027CP38220 110 aa2.83□□□□□ -1.96
VPS29YHR012W RAD6P06104 172 aa2.82□□□□□ -1.96
VPS29YHR012W YFR009W-AP0C5M9 85 aa2.82□□□□□ -1.96
VPS29YHR012W YAR1P46683 200 aa2.82□□□□□ -1.96
VPS29YHR012W EMC6Q12431 108 aa2.82□□□□□ -1.96
VPS29YHR012W RSM19P53733 91 aaPredicted RBP2.81□□□□□ -1.96
VPS29YHR012W YHL042WP38729 150 aa2.8□□□□□ -1.96
VPS29YHR012W RPL37BP51402 88 aaKnown RBP2.8□□□□□ -1.96
VPS29YHR012W EDC1P53080 175 aaPredicted RBP2.8□□□□□ -1.96
VPS29YHR012W ICS3P47034 131 aa2.79□□□□□ -1.96
VPS29YHR012W YNL184CP53876 108 aa2.79□□□□□ -1.96
VPS29YHR012W YNL122CP53921 115 aaPredicted RBP2.79□□□□□ -1.96
VPS29YHR012W YMR230W-AQ3E7B5 62 aa2.79□□□□□ -1.96
VPS29YHR012W YLR157W-DP0CE99 70 aa2.78□□□□□ -1.96
VPS29YHR012W TDA2P40045 126 aa2.78□□□□□ -1.96
VPS29YHR012W RPL38P49167 78 aaKnown RBP2.78□□□□□ -1.96
VPS29YHR012W SHH4Q06236 168 aa2.78□□□□□ -1.96
VPS29YHR012W YLR285C-AQ3E771 56 aa2.78□□□□□ -1.96
VPS29YHR012W YSY6P38374 65 aa2.77□□□□□ -1.97
VPS29YHR012W COF1Q03048 143 aaKnown RBP2.77□□□□□ -1.97
VPS29YHR012W YHR213W-BQ8TGK1 99 aa2.77□□□□□ -1.97
VPS29YHR012W YCR043CP25361 127 aa2.76□□□□□ -1.97
VPS29YHR012W COX23P38824 151 aa2.76□□□□□ -1.97
VPS29YHR012W RSM18P40033 138 aa2.76□□□□□ -1.97
VPS29YHR012W YGR039WP53225 103 aa2.76□□□□□ -1.97
VPS29YHR012W YDR119W-AQ2V2P9 66 aa2.76□□□□□ -1.97
VPS29YHR012W YOL097W-AQ3E7Y9 61 aa2.76□□□□□ -1.97
VPS29YHR012W ATP20Q12233 115 aa2.75□□□□□ -1.97
VPS29YHR012W YJL133C-AQ3E7A3 74 aa2.75□□□□□ -1.97
VPS29YHR012W TDA8Q6B2U8 126 aa2.75□□□□□ -1.97
VPS29YHR012W YOL014WQ08110 124 aa2.74□□□□□ -1.97
VPS29YHR012W YEL045CP32616 141 aa2.73□□□□□ -1.97
VPS29YHR012W ECM19Q06011 112 aa2.73□□□□□ -1.97
VPS29YHR012W YPL038W-AQ3E7B4 63 aa2.73□□□□□ -1.97
VPS29YHR012W YLR162WQ06235 118 aa2.72□□□□□ -1.97
VPS29YHR012W YKL183C-AQ3E765 70 aa2.72□□□□□ -1.97
VPS29YHR012W MIC10Q96VH5 97 aa2.72□□□□□ -1.97
VPS29YHR012W YCR050CP25630 102 aa2.71□□□□□ -1.98
VPS29YHR012W FYV12Q08559 129 aa2.7□□□□□ -1.98
VPS29YHR012W YOR304C-AO14468 76 aa2.69□□□□□ -1.98
VPS29YHR012W Q0017Q9ZZX8 53 aa2.69□□□□□ -1.98
VPS29YHR012W TOM6P33448 61 aa2.68□□□□□ -1.98
VPS29YHR012W YOR314WQ12506 109 aa2.68□□□□□ -1.98
VPS29YHR012W YDR246W-AQ3E763 66 aa2.67□□□□□ -1.98
VPS29YHR012W YER187WP40102 141 aa2.66□□□□□ -1.98
VPS29YHR012W NOP10Q6Q547 58 aaPredicted RBP2.66□□□□□ -1.98
VPS29YHR012W AIM4P38305 123 aaPredicted RBP2.65□□□□□ -1.99
VPS29YHR012W YAR064WP39563 99 aa2.64□□□□□ -1.99
VPS29YHR012W YPL080CQ02826 108 aa2.63□□□□□ -1.99
VPS29YHR012W RPL36AP05745 100 aaPredicted RBP2.62□□□□□ -1.99
VPS29YHR012W YIL102CP40488 101 aa2.62□□□□□ -1.99
VPS29YHR012W YOL013W-AP0C272 63 aaPredicted RBP2.61□□□□□ -1.99
VPS29YHR012W LIP1Q03579 150 aa2.61□□□□□ -1.99
VPS29YHR012W YDR182W-AQ3E796 67 aa2.61□□□□□ -1.99
VPS29YHR012W YOL166W-AQ8TGJ1 51 aa2.61□□□□□ -1.99
VPS29YHR012W YIR021W-AQ3E739 70 aa2.6□□□□□ -1.99
VPS29YHR012W YHR073W-AP0C5N7 58 aa2.59□□□□□ -1.99
VPS29YHR012W YPR153WQ06537 140 aa2.59□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms