RNA–Protein interactions for RNA: YGR198W

YPP1, Transcript of Cargo-transport protein involved in endocytosis, yeastyeast

Gene YPP1, Length 2,454 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPP1YGR198W RSM19P53733 91 aaPredicted RBP0.89□□□□□ -2.27
YPP1YGR198W YMR103CQ04436 120 aa0.89□□□□□ -2.27
YPP1YGR198W PAU23Q07987 124 aa0.89□□□□□ -2.27
YPP1YGR198W YLR162WQ06235 118 aa0.88□□□□□ -2.27
YPP1YGR198W YDL022C-AP0C5L6 82 aa0.88□□□□□ -2.27
YPP1YGR198W GSP2P32836 220 aaKnown RBP0.87□□□□□ -2.27
YPP1YGR198W ATP14Q12349 124 aa0.87□□□□□ -2.27
YPP1YGR198W YJL133C-AQ3E7A3 74 aa0.87□□□□□ -2.27
YPP1YGR198W JAC1P53193 184 aa0.87□□□□□ -2.27
YPP1YGR198W YPL261CQ08976 102 aa0.86□□□□□ -2.27
YPP1YGR198W MIC10Q96VH5 97 aa0.86□□□□□ -2.27
YPP1YGR198W YOR316C-AQ3E806 69 aa0.86□□□□□ -2.27
YPP1YGR198W AIM4P38305 123 aaPredicted RBP0.85□□□□□ -2.27
YPP1YGR198W POP3P53833 195 aaPredicted RBP0.84□□□□□ -2.27
YPP1YGR198W YLR361C-AQ3E795 98 aa0.84□□□□□ -2.27
YPP1YGR198W UBC12P52491 188 aa0.84□□□□□ -2.28
YPP1YGR198W ECM19Q06011 112 aa0.84□□□□□ -2.28
YPP1YGR198W IGO2Q9P305 131 aa0.84□□□□□ -2.28
YPP1YGR198W VMA9Q3E7B6 73 aa0.83□□□□□ -2.28
YPP1YGR198W FYV4P38783 130 aaPredicted RBP0.82□□□□□ -2.28
YPP1YGR198W UIP3P39547 235 aa0.82□□□□□ -2.28
YPP1YGR198W SNN1P48232 102 aa0.82□□□□□ -2.28
YPP1YGR198W CYT2Q00873 224 aa0.82□□□□□ -2.28
YPP1YGR198W YHR130CP38834 111 aa0.79□□□□□ -2.28
YPP1YGR198W YNR077CP53758 84 aa0.79□□□□□ -2.28
YPP1YGR198W YHR213W-BQ8TGK1 99 aa0.78□□□□□ -2.28
YPP1YGR198W YOR034C-AQ3E735 80 aa0.78□□□□□ -2.28
YPP1YGR198W TSC3Q3E790 80 aa0.77□□□□□ -2.29
YPP1YGR198W RPL36AP05745 100 aaPredicted RBP0.77□□□□□ -2.29
YPP1YGR198W YKL044WP36092 106 aa0.76□□□□□ -2.29
YPP1YGR198W YLR050CQ12155 161 aaKnown RBP0.76□□□□□ -2.29
YPP1YGR198W SEC11P15367 167 aa0.76□□□□□ -2.29
YPP1YGR198W YBL044WP38194 122 aa0.76□□□□□ -2.29
YPP1YGR198W ICS3P47034 131 aa0.76□□□□□ -2.29
YPP1YGR198W HHO1P53551 258 aa0.76□□□□□ -2.29
YPP1YGR198W YBL008W-AQ3E821 79 aa0.75□□□□□ -2.29
YPP1YGR198W MID2P36027 376 aa0.74□□□□□ -2.29
YPP1YGR198W SRB6P32570 121 aa0.74□□□□□ -2.29
YPP1YGR198W COX23P38824 151 aa0.74□□□□□ -2.29
YPP1YGR198W SKI6P46948 246 aaPredicted RBP0.74□□□□□ -2.29
YPP1YGR198W YPL080CQ02826 108 aa0.74□□□□□ -2.29
YPP1YGR198W LIP1Q03579 150 aa0.74□□□□□ -2.29
YPP1YGR198W VMA21P41806 77 aa0.72□□□□□ -2.29
YPP1YGR198W YFR009W-AP0C5M9 85 aa0.72□□□□□ -2.29
YPP1YGR198W HHF1P02309 103 aaKnown RBP0.71□□□□□ -2.3
YPP1YGR198W YHL042WP38729 150 aa0.71□□□□□ -2.3
YPP1YGR198W YFR057WP43625 151 aa0.71□□□□□ -2.3
YPP1YGR198W ATP18P81450 59 aa0.71□□□□□ -2.3
YPP1YGR198W YAR064WP39563 99 aa0.7□□□□□ -2.3
YPP1YGR198W NSE4P43124 402 aa0.7□□□□□ -2.3
YPP1YGR198W HUR1P45820 110 aa0.7□□□□□ -2.3
YPP1YGR198W COA6Q3E846 104 aa0.7□□□□□ -2.3
YPP1YGR198W ATG8P38182 117 aaRIP-Chip data0.69□□□□□ -2.3not detected
YPP1YGR198W ISD11Q6Q560 94 aa0.69□□□□□ -2.3
YPP1YGR198W TDA2P40045 126 aa0.69□□□□□ -2.3
YPP1YGR198W YOR304C-AO14468 76 aa0.68□□□□□ -2.3
YPP1YGR198W YJR107C-AP0CT86 78 aa0.68□□□□□ -2.3
YPP1YGR198W TIM11P81449 96 aaPredicted RBP0.68□□□□□ -2.3
YPP1YGR198W MRPL44P19956 98 aa0.67□□□□□ -2.3
YPP1YGR198W POP7P38291 140 aa0.66□□□□□ -2.3
YPP1YGR198W YIL156W-BQ2V2P4 73 aa0.66□□□□□ -2.3
YPP1YGR198W CNL1Q06333 122 aa0.65□□□□□ -2.3
YPP1YGR198W RPS30AP0CX33 63 aaKnown RBP0.65□□□□□ -2.31
YPP1YGR198W RPS30BP0CX34 63 aaKnown RBP0.65□□□□□ -2.31
YPP1YGR198W YCR050CP25630 102 aa0.65□□□□□ -2.31
YPP1YGR198W YOL014WQ08110 124 aa0.65□□□□□ -2.31
YPP1YGR198W FMP16Q12497 93 aa0.65□□□□□ -2.31
YPP1YGR198W COX8P04039 78 aa0.64□□□□□ -2.31
YPP1YGR198W YGR146C-AQ8TGT9 53 aa0.64□□□□□ -2.31
YPP1YGR198W TMA7Q3E764 64 aaKnown RBP0.63□□□□□ -2.31
YPP1YGR198W MSL1P40567 111 aaPredicted RBP0.62□□□□□ -2.31
YPP1YGR198W OLI1P61829 76 aa0.62□□□□□ -2.31
YPP1YGR198W CUE4Q04201 117 aaPredicted RBP0.62□□□□□ -2.31
YPP1YGR198W YLR296WQ05898 108 aa0.61□□□□□ -2.31
YPP1YGR198W GTT1P40582 234 aa0.59□□□□□ -2.32
YPP1YGR198W YIL102CP40488 101 aa0.58□□□□□ -2.32
YPP1YGR198W YKL065W-AQ2V2P2 73 aa0.58□□□□□ -2.32
YPP1YGR198W ELC1Q03071 99 aa0.58□□□□□ -2.32
YPP1YGR198W ZEO1Q08245 113 aa0.58□□□□□ -2.32
YPP1YGR198W YDR381C-AQ3E6R5 114 aa0.58□□□□□ -2.32
YPP1YGR198W LSM6Q06406 86 aaKnown RBP0.57□□□□□ -2.32
YPP1YGR198W RAD6P06104 172 aa0.56□□□□□ -2.32
YPP1YGR198W RPA12P32529 125 aaKnown RBP0.56□□□□□ -2.32
YPP1YGR198W YER181CP40097 107 aa0.55□□□□□ -2.32
YPP1YGR198W INO4P13902 151 aa0.54□□□□□ -2.32
YPP1YGR198W ATP20Q12233 115 aa0.54□□□□□ -2.32
YPP1YGR198W CGR1P53188 120 aa0.54□□□□□ -2.32
YPP1YGR198W YGR039WP53225 103 aa0.53□□□□□ -2.32
YPP1YGR198W YML108WQ03759 105 aa0.53□□□□□ -2.32
YPP1YGR198W RPL38P49167 78 aaKnown RBP0.53□□□□□ -2.33
YPP1YGR198W MRX7P53869 86 aa0.52□□□□□ -2.33
YPP1YGR198W EMC6Q12431 108 aa0.52□□□□□ -2.33
YPP1YGR198W YOR394C-AQ8TGJ0 55 aa0.52□□□□□ -2.33
YPP1YGR198W NAT5Q08689 176 aa0.51□□□□□ -2.33
YPP1YGR198W YOR072W-BQ3E832 53 aa0.5□□□□□ -2.33
YPP1YGR198W PAI3P01094 68 aa0.5□□□□□ -2.33
YPP1YGR198W GLC8P41818 229 aa0.49□□□□□ -2.33
YPP1YGR198W YHR125WP38831 101 aa0.47□□□□□ -2.33
YPP1YGR198W YOL013W-AP0C272 63 aaPredicted RBP0.47□□□□□ -2.33
YPP1YGR198W SSS1P35179 80 aa0.47□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 32.5 ms