RNA–Protein interactions for RNA: YGL003C

CDH1, Transcript of Activator of anaphase-promoting complex/cyclosome (APC/C), yeastyeast

Gene CDH1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDH1YGL003C YLR236CA0A023PZG4 107 aa2.25□□□□□ -2.05
CDH1YGL003C YJR107C-AP0CT86 78 aa2.25□□□□□ -2.05
CDH1YGL003C RPL33BP41056 107 aaKnown RBP2.25□□□□□ -2.05
CDH1YGL003C YDR114CQ04597 100 aa2.25□□□□□ -2.05
CDH1YGL003C YKL065W-AQ2V2P2 73 aa2.25□□□□□ -2.05
CDH1YGL003C RPS27AP35997 82 aaKnown RBP2.24□□□□□ -2.05
CDH1YGL003C RPS27BP38711 82 aa2.24□□□□□ -2.05
CDH1YGL003C COX23P38824 151 aa2.24□□□□□ -2.05
CDH1YGL003C RPL38P49167 78 aaKnown RBP2.24□□□□□ -2.05
CDH1YGL003C NOP10Q6Q547 58 aaPredicted RBP2.24□□□□□ -2.05
CDH1YGL003C SED1Q01589 338 aa2.23□□□□□ -2.05
CDH1YGL003C YMR122CQ03879 124 aa2.23□□□□□ -2.05
CDH1YGL003C YGR035W-AQ45U48 73 aa2.23□□□□□ -2.05
CDH1YGL003C YOL085CQ99345 113 aa2.23□□□□□ -2.05
CDH1YGL003C FAB1P34756 2278 aa2.23□□□□□ -2.05
CDH1YGL003C YJR146WP47174 117 aa2.22□□□□□ -2.05
CDH1YGL003C SNA2P56508 79 aa2.22□□□□□ -2.05
CDH1YGL003C ATP18P81450 59 aa2.22□□□□□ -2.05
CDH1YGL003C YCR095W-AQ3E787 52 aa2.22□□□□□ -2.05
CDH1YGL003C YDR182W-AQ3E796 67 aa2.22□□□□□ -2.05
CDH1YGL003C QCR8P08525 94 aa2.22□□□□□ -2.05
CDH1YGL003C YER188C-AP0C0V2 99 aa2.22□□□□□ -2.05
CDH1YGL003C RPS30AP0CX33 63 aaKnown RBP2.22□□□□□ -2.05
CDH1YGL003C RPS30BP0CX34 63 aaKnown RBP2.22□□□□□ -2.05
CDH1YGL003C YEL014CP39999 101 aa2.21□□□□□ -2.06
CDH1YGL003C YJL027CP47063 138 aaPredicted RBP2.21□□□□□ -2.06
CDH1YGL003C POR2P40478 281 aa2.2□□□□□ -2.06
CDH1YGL003C SPC1P46965 94 aa2.2□□□□□ -2.06
CDH1YGL003C YPR195CQ06594 109 aa2.2□□□□□ -2.06
CDH1YGL003C YOL166W-AQ8TGJ1 51 aa2.2□□□□□ -2.06
CDH1YGL003C COX8P04039 78 aa2.2□□□□□ -2.06
CDH1YGL003C YCL048W-AQ2V2Q2 79 aa2.2□□□□□ -2.06
CDH1YGL003C YFR009W-AP0C5M9 85 aa2.19□□□□□ -2.06
CDH1YGL003C YBR027CP38220 110 aa2.19□□□□□ -2.06
CDH1YGL003C YHL037CP38733 133 aa2.19□□□□□ -2.06
CDH1YGL003C YEL008WP40001 126 aa2.19□□□□□ -2.06
CDH1YGL003C YIL102CP40488 101 aa2.19□□□□□ -2.06
CDH1YGL003C CMC4Q3E7A9 73 aa2.19□□□□□ -2.06
CDH1YGL003C YBR200W-AQ3E755 54 aa2.18□□□□□ -2.06
CDH1YGL003C YOR032W-AQ8TGS1 66 aa2.18□□□□□ -2.06
CDH1YGL003C MRPL38P35996 138 aaPredicted RBP2.17□□□□□ -2.06
CDH1YGL003C YER084WP40057 128 aa2.17□□□□□ -2.06
CDH1YGL003C YGR025WP53216 100 aa2.17□□□□□ -2.06
CDH1YGL003C MRX7P53869 86 aa2.17□□□□□ -2.06
CDH1YGL003C YDR524C-BQ3E6R4 66 aa2.17□□□□□ -2.06
CDH1YGL003C YLL006W-AQ3E814 58 aa2.17□□□□□ -2.06
CDH1YGL003C SIP18P50263 79 aa2.17□□□□□ -2.06
CDH1YGL003C BSC4P53841 131 aa2.16□□□□□ -2.06
CDH1YGL003C YIL086CP40503 102 aa2.15□□□□□ -2.07
CDH1YGL003C YDR010CQ12426 110 aa2.15□□□□□ -2.07
CDH1YGL003C YIL156W-BQ2V2P4 73 aa2.15□□□□□ -2.07
CDH1YGL003C YMR105W-AQ8TGS8 64 aa2.15□□□□□ -2.07
CDH1YGL003C YPR010C-AA5Z2X5 72 aa2.14□□□□□ -2.07
CDH1YGL003C RPL39P04650 51 aa2.14□□□□□ -2.07
CDH1YGL003C FPR1P20081 114 aaKnown RBP2.14□□□□□ -2.07
CDH1YGL003C YIL046W-AQ3E7Z4 54 aa2.14□□□□□ -2.07
CDH1YGL003C HUB1Q6Q546 73 aa2.14□□□□□ -2.07
CDH1YGL003C RPS11AP0CX47 156 aaKnown RBP2.13□□□□□ -2.07
CDH1YGL003C RPS11BP0CX48 156 aaKnown RBP2.13□□□□□ -2.07
CDH1YGL003C VAM10Q08474 114 aa2.13□□□□□ -2.07
CDH1YGL003C YMR122W-AQ3E842 84 aa2.13□□□□□ -2.07
CDH1YGL003C YGL014C-AP0C5N1 53 aa2.12□□□□□ -2.07
CDH1YGL003C YBR219CP38317 127 aa2.12□□□□□ -2.07
CDH1YGL003C YJL144WP47009 104 aa2.12□□□□□ -2.07
CDH1YGL003C YNL042W-BQ3E7Z2 85 aa2.12□□□□□ -2.07
CDH1YGL003C YLR157W-DP0CE99 70 aa2.11□□□□□ -2.07
CDH1YGL003C YHR007C-AQ07074 71 aa2.11□□□□□ -2.07
CDH1YGL003C CCW12Q12127 133 aa2.11□□□□□ -2.07
CDH1YGL003C HFA1P32874 2273 aa2.11□□□□□ -2.07
CDH1YGL003C AQY2P0CD90 149 aa2.11□□□□□ -2.07
CDH1YGL003C PMP3P87284 55 aa2.11□□□□□ -2.07
CDH1YGL003C SDH6Q3E785 79 aa2.11□□□□□ -2.07
CDH1YGL003C YOR011W-AQ3E807 68 aa2.11□□□□□ -2.07
CDH1YGL003C YHR213W-BQ8TGK1 99 aa2.11□□□□□ -2.07
CDH1YGL003C RPL33AP05744 107 aaKnown RBP2.1□□□□□ -2.07
CDH1YGL003C YGL041C-BQ3E750 60 aa2.1□□□□□ -2.07
CDH1YGL003C YMR001C-AQ8TGS9 76 aa2.1□□□□□ -2.07
CDH1YGL003C GIS2P53849 153 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
CDH1YGL003C YJL133C-AQ3E7A3 74 aa2.09□□□□□ -2.07
CDH1YGL003C YOL013W-AP0C272 63 aaPredicted RBP2.08□□□□□ -2.08
CDH1YGL003C ATP17Q06405 101 aa2.08□□□□□ -2.08
CDH1YGL003C RPL29P05747 59 aaPredicted RBP2.08□□□□□ -2.08
CDH1YGL003C YNL146C-AQ3E7Z1 64 aa2.08□□□□□ -2.08
CDH1YGL003C URA2P07259 2214 aaKnown RBP2.08□□□□□ -2.08
CDH1YGL003C YCR001WP25347 104 aa2.07□□□□□ -2.08
CDH1YGL003C MVB12P42939 101 aa2.07□□□□□ -2.08
CDH1YGL003C LCL2Q08045 131 aa2.07□□□□□ -2.08
CDH1YGL003C YBR230W-AQ3E762 66 aa2.05□□□□□ -2.08
CDH1YGL003C YJL127C-BQ3E828 52 aa2.05□□□□□ -2.08
CDH1YGL003C YNL122CP53921 115 aaPredicted RBP2.05□□□□□ -2.08
CDH1YGL003C YDR210WQ03482 75 aa2.05□□□□□ -2.08
CDH1YGL003C TAR1Q8TGM6 124 aa2.05□□□□□ -2.08
CDH1YGL003C IRA2P19158 3079 aa2.04□□□□□ -2.08
CDH1YGL003C YBL039W-BP0C268 59 aa2.03□□□□□ -2.08
CDH1YGL003C AUA1P32450 94 aa2.03□□□□□ -2.08
CDH1YGL003C SGF11Q03067 99 aa2.03□□□□□ -2.08
CDH1YGL003C YGR240C-AQ3E786 66 aa2.03□□□□□ -2.08
CDH1YGL003C Q0032Q9ZZX7 96 aa2.03□□□□□ -2.08
CDH1YGL003C YAR064WP39563 99 aa2.03□□□□□ -2.09
CDH1YGL003C DDR2P89113 61 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms