RNA–Protein interactions for RNA: YER168C

CCA1, Transcript of ATP (CTP):tRNA-specific tRNA nucleotidyltransferase, yeastyeast

Gene CCA1, Length 1,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCA1YER168C SHH4Q06236 168 aa7.31□□□□□ -1.24
CCA1YER168C YJL127C-BQ3E828 52 aa7.31□□□□□ -1.24
CCA1YER168C SNA2P56508 79 aa7.3□□□□□ -1.24
CCA1YER168C Q0032Q9ZZX7 96 aa7.3□□□□□ -1.24
CCA1YER168C RSM19P53733 91 aaPredicted RBP7.29□□□□□ -1.24
CCA1YER168C YLR285C-AQ3E771 56 aa7.28□□□□□ -1.24
CCA1YER168C YOR304C-AO14468 76 aa7.27□□□□□ -1.25
CCA1YER168C YSY6P38374 65 aa7.27□□□□□ -1.25
CCA1YER168C YPL038W-AQ3E7B4 63 aa7.27□□□□□ -1.25
CCA1YER168C YNL042W-BQ3E7Z2 85 aa7.27□□□□□ -1.25
CCA1YER168C YHL018WP38744 120 aaPredicted RBP7.26□□□□□ -1.25
CCA1YER168C SFT1P43682 97 aa7.24□□□□□ -1.25
CCA1YER168C RPL38P49167 78 aaKnown RBP7.24□□□□□ -1.25
CCA1YER168C RPL11AP0C0W9 174 aaKnown RBP7.23□□□□□ -1.25
CCA1YER168C YLR156WP0CE96 114 aa7.23□□□□□ -1.25
CCA1YER168C YLR159WP0CE97 114 aa7.23□□□□□ -1.25
CCA1YER168C YLR161WP0CE98 114 aa7.23□□□□□ -1.25
CCA1YER168C RPL11BQ3E757 174 aaPredicted RBP7.23□□□□□ -1.25
CCA1YER168C BET1P22804 142 aa7.23□□□□□ -1.25
CCA1YER168C YDR029WQ12111 104 aa7.22□□□□□ -1.25
CCA1YER168C TDA2P40045 126 aa7.21□□□□□ -1.26
CCA1YER168C ICS3P47034 131 aa7.21□□□□□ -1.26
CCA1YER168C YGL041C-BQ3E750 60 aa7.21□□□□□ -1.26
CCA1YER168C ECM12O13529 151 aa7.19□□□□□ -1.26
CCA1YER168C PEX22P39718 180 aa7.19□□□□□ -1.26
CCA1YER168C RSM18P40033 138 aa7.19□□□□□ -1.26
CCA1YER168C YPL080CQ02826 108 aa7.19□□□□□ -1.26
CCA1YER168C YGL193CP53097 103 aa7.17□□□□□ -1.26
CCA1YER168C YOL014WQ08110 124 aa7.16□□□□□ -1.26
CCA1YER168C YHR213W-BQ8TGK1 99 aa7.16□□□□□ -1.26
CCA1YER168C SPT4P32914 102 aaPredicted RBP7.16□□□□□ -1.26
CCA1YER168C COX23P38824 151 aa7.16□□□□□ -1.26
CCA1YER168C EDC2P40023 145 aaPredicted RBP7.14□□□□□ -1.27
CCA1YER168C ATP20Q12233 115 aa7.14□□□□□ -1.27
CCA1YER168C TOM6P33448 61 aa7.13□□□□□ -1.27
CCA1YER168C DDR2P89113 61 aa7.13□□□□□ -1.27
CCA1YER168C RPL36BO14455 100 aaKnown RBP7.12□□□□□ -1.27
CCA1YER168C GIS2P53849 153 aaKnown RBP RIP-Chip data7.12□□□□□ -1.27not detected
CCA1YER168C YHR007C-AQ07074 71 aa7.12□□□□□ -1.27
CCA1YER168C YJL133C-AQ3E7A3 74 aa7.12□□□□□ -1.27
CCA1YER168C BSC4P53841 131 aa7.11□□□□□ -1.27
CCA1YER168C YPR195CQ06594 109 aa7.11□□□□□ -1.27
CCA1YER168C YDR246W-AQ3E763 66 aa7.11□□□□□ -1.27
CCA1YER168C YIR021W-AQ3E739 70 aa7.09□□□□□ -1.27
CCA1YER168C YKL183C-AQ3E765 70 aa7.09□□□□□ -1.27
CCA1YER168C YOR072WQ08486 104 aa7.09□□□□□ -1.28
CCA1YER168C MRP10O75012 95 aa7.08□□□□□ -1.28
CCA1YER168C YDR034C-AP0C289 58 aa7.08□□□□□ -1.28
CCA1YER168C TDA8Q6B2U8 126 aa7.08□□□□□ -1.28
CCA1YER168C YER039C-AP0CD97 72 aa7.07□□□□□ -1.28
CCA1YER168C YER187WP40102 141 aa7.07□□□□□ -1.28
CCA1YER168C ECM19Q06011 112 aa7.06□□□□□ -1.28
CCA1YER168C YCR050CP25630 102 aa7.01□□□□□ -1.29
CCA1YER168C YEL045CP32616 141 aa7.01□□□□□ -1.29
CCA1YER168C YKL069WP36088 180 aa7.01□□□□□ -1.29
CCA1YER168C YOR314WQ12506 109 aa7.01□□□□□ -1.29
CCA1YER168C NOP10Q6Q547 58 aaPredicted RBP7.01□□□□□ -1.29
CCA1YER168C YLR415CO13578 112 aa7.01□□□□□ -1.29
CCA1YER168C AIM4P38305 123 aaPredicted RBP7.01□□□□□ -1.29
CCA1YER168C YLR162WQ06235 118 aa7□□□□□ -1.29
CCA1YER168C YMR230W-AQ3E7B5 62 aa6.99□□□□□ -1.29
CCA1YER168C MIC10Q96VH5 97 aa6.99□□□□□ -1.29
CCA1YER168C YJL197C-AP0C5P0 93 aa6.95□□□□□ -1.3
CCA1YER168C YGR121W-AQ3E816 71 aa6.94□□□□□ -1.3
CCA1YER168C YOL166W-AQ8TGJ1 51 aa6.9□□□□□ -1.3
CCA1YER168C HOT13P36078 116 aa6.9□□□□□ -1.31
CCA1YER168C YBR182C-AQ8TGU6 64 aa6.89□□□□□ -1.31
CCA1YER168C YDR182W-AQ3E796 67 aa6.88□□□□□ -1.31
CCA1YER168C YBR027CP38220 110 aa6.87□□□□□ -1.31
CCA1YER168C SPG1P50088 95 aa6.87□□□□□ -1.31
CCA1YER168C RPL36AP05745 100 aaPredicted RBP6.87□□□□□ -1.31
CCA1YER168C LCL2Q08045 131 aa6.87□□□□□ -1.31
CCA1YER168C YIL102CP40488 101 aa6.86□□□□□ -1.31
CCA1YER168C LIP1Q03579 150 aa6.86□□□□□ -1.31
CCA1YER168C YLR361C-AQ3E795 98 aa6.85□□□□□ -1.31
CCA1YER168C YAR064WP39563 99 aa6.83□□□□□ -1.32
CCA1YER168C YJR085CP47131 105 aaKnown RBP6.83□□□□□ -1.32
CCA1YER168C YCR043CP25361 127 aa6.81□□□□□ -1.32
CCA1YER168C YOL013W-AP0C272 63 aaPredicted RBP6.8□□□□□ -1.32
CCA1YER168C LCL1Q02786 101 aa6.79□□□□□ -1.32
CCA1YER168C YHL005CP38752 130 aa6.76□□□□□ -1.33
CCA1YER168C YOL097W-AQ3E7Y9 61 aa6.76□□□□□ -1.33
CCA1YER168C YLR157W-DP0CE99 70 aa6.76□□□□□ -1.33
CCA1YER168C MMS2P53152 137 aa6.75□□□□□ -1.33
CCA1YER168C RPS30AP0CX33 63 aaKnown RBP6.74□□□□□ -1.33
CCA1YER168C RPS30BP0CX34 63 aaKnown RBP6.74□□□□□ -1.33
CCA1YER168C YOR268CQ08734 132 aa6.72□□□□□ -1.33
CCA1YER168C YDL012CQ12489 107 aa6.72□□□□□ -1.33
CCA1YER168C YPR153WQ06537 140 aa6.71□□□□□ -1.34
CCA1YER168C SBH1P52870 82 aa6.68□□□□□ -1.34
CCA1YER168C SAP30P38429 201 aa6.66□□□□□ -1.34
CCA1YER168C YHR125WP38831 101 aa6.63□□□□□ -1.35
CCA1YER168C YGL149WP53116 101 aa6.63□□□□□ -1.35
CCA1YER168C DDR48P18899 430 aaKnown RBP6.61□□□□□ -1.35
CCA1YER168C KSH1Q8TGJ3 72 aa6.59□□□□□ -1.35
CCA1YER168C YHR073W-AP0C5N7 58 aa6.55□□□□□ -1.36
CCA1YER168C SDH6Q3E785 79 aa6.55□□□□□ -1.36
CCA1YER168C YOR381W-AQ3E804 55 aa6.54□□□□□ -1.36
CCA1YER168C HHF1P02309 103 aaKnown RBP6.54□□□□□ -1.36
CCA1YER168C YDR010CQ12426 110 aa6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms