RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHC1	YER096W	YNL184C	P53876	108 aa		5.07	□□□□□ -1.6
SHC1	YER096W	YIR021W-A	Q3E739	70 aa		5.07	□□□□□ -1.6
SHC1	YER096W	OST2	P46964	130 aa		5.07	□□□□□ -1.6
SHC1	YER096W	DDR2	P89113	61 aa		5.06	□□□□□ -1.6
SHC1	YER096W	SPT4	P32914	102 aa	Predicted RBP	5.05	□□□□□ -1.6
SHC1	YER096W	BSC4	P53841	131 aa		5.05	□□□□□ -1.6
SHC1	YER096W	LCL1	Q02786	101 aa		5.05	□□□□□ -1.6
SHC1	YER096W	YLR361C-A	Q3E795	98 aa		5.05	□□□□□ -1.6
SHC1	YER096W	MMS2	P53152	137 aa		5.04	□□□□□ -1.6
SHC1	YER096W	ATP18	P81450	59 aa		5.04	□□□□□ -1.6
SHC1	YER096W	YHR007C-A	Q07074	71 aa		5.03	□□□□□ -1.6
SHC1	YER096W	YFR009W-A	P0C5M9	85 aa		5.02	□□□□□ -1.61
SHC1	YER096W	BET1	P22804	142 aa		5.02	□□□□□ -1.61
SHC1	YER096W	YMR230W-A	Q3E7B5	62 aa		5.02	□□□□□ -1.61
SHC1	YER096W	YER039C-A	P0CD97	72 aa		5.02	□□□□□ -1.61
SHC1	YER096W	YDR381C-A	Q3E6R5	114 aa		5.02	□□□□□ -1.61
SHC1	YER096W	EDC1	P53080	175 aa	Predicted RBP	5.01	□□□□□ -1.61
SHC1	YER096W	PBI2	P0CT04	75 aa	Known RBP	5	□□□□□ -1.61
SHC1	YER096W	INO4	P13902	151 aa		5	□□□□□ -1.61
SHC1	YER096W	ATX1	P38636	73 aa		5	□□□□□ -1.61
SHC1	YER096W	YOR072W	Q08486	104 aa		4.99	□□□□□ -1.61
SHC1	YER096W	DDR48	P18899	430 aa	Known RBP	4.98	□□□□□ -1.61
SHC1	YER096W	EDC2	P40023	145 aa	Predicted RBP	4.98	□□□□□ -1.61
SHC1	YER096W	RPL36B	O14455	100 aa	Known RBP	4.97	□□□□□ -1.61
SHC1	YER096W	SFT1	P43682	97 aa		4.97	□□□□□ -1.61
SHC1	YER096W	TSC3	Q3E790	80 aa		4.97	□□□□□ -1.61
SHC1	YER096W	YGR121W-A	Q3E816	71 aa		4.96	□□□□□ -1.62
SHC1	YER096W	SKI6	P46948	246 aa	Predicted RBP	4.95	□□□□□ -1.62
SHC1	YER096W	RSM18	P40033	138 aa		4.94	□□□□□ -1.62
SHC1	YER096W	YBL112C	Q3E7Y4	105 aa		4.94	□□□□□ -1.62
SHC1	YER096W	YHR139C-A	O13536	103 aa		4.93	□□□□□ -1.62
SHC1	YER096W	YCR085W	P25650	117 aa		4.93	□□□□□ -1.62
SHC1	YER096W	ICS3	P47034	131 aa		4.93	□□□□□ -1.62
SHC1	YER096W	ISD11	Q6Q560	94 aa		4.93	□□□□□ -1.62
SHC1	YER096W	RPS28B	P0C0X0	67 aa	Known RBP	4.92	□□□□□ -1.62
SHC1	YER096W	YJR085C	P47131	105 aa	Known RBP	4.92	□□□□□ -1.62
SHC1	YER096W	SPG1	P50088	95 aa		4.92	□□□□□ -1.62
SHC1	YER096W	YAL063C-A	Q3E791	96 aa		4.92	□□□□□ -1.62
SHC1	YER096W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.92	□□□□□ -1.62
SHC1	YER096W	YHR213W-B	Q8TGK1	99 aa		4.92	□□□□□ -1.62
SHC1	YER096W	KRE1	P17260	313 aa		4.92	□□□□□ -1.62
SHC1	YER096W	YBR027C	P38220	110 aa		4.92	□□□□□ -1.62
SHC1	YER096W	YOL014W	Q08110	124 aa		4.92	□□□□□ -1.62
SHC1	YER096W	TDA8	Q6B2U8	126 aa		4.92	□□□□□ -1.62
SHC1	YER096W	YBR121C-A	P0C5L4	52 aa		4.91	□□□□□ -1.62
SHC1	YER096W	SHH4	Q06236	168 aa		4.91	□□□□□ -1.62
SHC1	YER096W	YOR268C	Q08734	132 aa		4.91	□□□□□ -1.62
SHC1	YER096W	RAD6	P06104	172 aa		4.9	□□□□□ -1.63
SHC1	YER096W	YJL197C-A	P0C5P0	93 aa		4.9	□□□□□ -1.63
SHC1	YER096W	RSM19	P53733	91 aa	Predicted RBP	4.89	□□□□□ -1.63
SHC1	YER096W	YJL133C-A	Q3E7A3	74 aa		4.89	□□□□□ -1.63
SHC1	YER096W	COX23	P38824	151 aa		4.88	□□□□□ -1.63
SHC1	YER096W	RPL38	P49167	78 aa	Known RBP	4.88	□□□□□ -1.63
SHC1	YER096W	YGL149W	P53116	101 aa		4.88	□□□□□ -1.63
SHC1	YER096W	YER175W-A	Q8TGU4	54 aa		4.88	□□□□□ -1.63
SHC1	YER096W	YFL065C	P43539	102 aa		4.87	□□□□□ -1.63
SHC1	YER096W	ECM19	Q06011	112 aa		4.87	□□□□□ -1.63
SHC1	YER096W	YPR203W	Q08994	102 aa		4.87	□□□□□ -1.63
SHC1	YER096W	YFL067W	P43537	175 aa		4.87	□□□□□ -1.63
SHC1	YER096W	YLR162W	Q06235	118 aa		4.85	□□□□□ -1.63
SHC1	YER096W	YFL041W-A	Q3E817	63 aa		4.85	□□□□□ -1.63
SHC1	YER096W	MIC10	Q96VH5	97 aa		4.85	□□□□□ -1.63
SHC1	YER096W	YEL045C	P32616	141 aa		4.84	□□□□□ -1.63
SHC1	YER096W	TDA2	P40045	126 aa		4.83	□□□□□ -1.64
SHC1	YER096W	COF1	Q03048	143 aa	Known RBP	4.81	□□□□□ -1.64
SHC1	YER096W	YDR010C	Q12426	110 aa		4.81	□□□□□ -1.64
SHC1	YER096W	EMC6	Q12431	108 aa		4.81	□□□□□ -1.64
SHC1	YER096W	YLR285C-A	Q3E771	56 aa		4.79	□□□□□ -1.64
SHC1	YER096W	ATP20	Q12233	115 aa		4.78	□□□□□ -1.64
SHC1	YER096W	HOT13	P36078	116 aa		4.77	□□□□□ -1.65
SHC1	YER096W	YHL042W	P38729	150 aa		4.76	□□□□□ -1.65
SHC1	YER096W	YSY6	P38374	65 aa		4.75	□□□□□ -1.65
SHC1	YER096W	SBH1	P52870	82 aa		4.75	□□□□□ -1.65
SHC1	YER096W	YGR039W	P53225	103 aa		4.75	□□□□□ -1.65
SHC1	YER096W	KTI11	Q3E840	82 aa		4.74	□□□□□ -1.65
SHC1	YER096W	YCR043C	P25361	127 aa		4.73	□□□□□ -1.65
SHC1	YER096W	YOL097W-A	Q3E7Y9	61 aa		4.73	□□□□□ -1.65
SHC1	YER096W	YLR157W-D	P0CE99	70 aa		4.72	□□□□□ -1.65
SHC1	YER096W	YDR119W-A	Q2V2P9	66 aa		4.72	□□□□□ -1.65
SHC1	YER096W	YCR050C	P25630	102 aa		4.72	□□□□□ -1.65
SHC1	YER096W	YHL018W	P38744	120 aa	Predicted RBP	4.71	□□□□□ -1.66
SHC1	YER096W	KSH1	Q8TGJ3	72 aa		4.7	□□□□□ -1.66
SHC1	YER096W	YDL012C	Q12489	107 aa		4.68	□□□□□ -1.66
SHC1	YER096W	YLR412C-A	Q3E742	68 aa		4.68	□□□□□ -1.66
SHC1	YER096W	YKL183C-A	Q3E765	70 aa		4.67	□□□□□ -1.66
SHC1	YER096W	YAR064W	P39563	99 aa		4.67	□□□□□ -1.66
SHC1	YER096W	YHL005C	P38752	130 aa		4.66	□□□□□ -1.66
SHC1	YER096W	YDR246W-A	Q3E763	66 aa		4.65	□□□□□ -1.67
SHC1	YER096W	TOM6	P33448	61 aa		4.64	□□□□□ -1.67
SHC1	YER096W	RPL36A	P05745	100 aa	Predicted RBP	4.63	□□□□□ -1.67
SHC1	YER096W	YPL038W-A	Q3E7B4	63 aa		4.62	□□□□□ -1.67
SHC1	YER096W	YGR164W	P53291	111 aa		4.62	□□□□□ -1.67
SHC1	YER096W	YNL277W-A	Q3E7Z0	62 aa		4.61	□□□□□ -1.67
SHC1	YER096W	NOP10	Q6Q547	58 aa	Predicted RBP	4.61	□□□□□ -1.67
SHC1	YER096W	YPR153W	Q06537	140 aa		4.58	□□□□□ -1.68
SHC1	YER096W	YOR314W	Q12506	109 aa		4.58	□□□□□ -1.68
SHC1	YER096W	YHR073W-A	P0C5N7	58 aa		4.56	□□□□□ -1.68
SHC1	YER096W	YIL102C	P40488	101 aa		4.56	□□□□□ -1.68
SHC1	YER096W	YOL013W-A	P0C272	63 aa	Predicted RBP	4.55	□□□□□ -1.68
SHC1	YER096W	LIP1	Q03579	150 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms