RNA–Protein interactions for RNA: YEL015W

EDC3, Transcript of Non-essential conserved protein with a role in mRNA decapping, yeast

Gene EDC3, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EDC3	YEL015W	MRPL38	P35996	138 aa	Predicted RBP	5	□□□□□ -1.61
EDC3	YEL015W	YDR524C-B	Q3E6R4	66 aa		5	□□□□□ -1.61
EDC3	YEL015W	YMR105W-A	Q8TGS8	64 aa		5	□□□□□ -1.61
EDC3	YEL015W	ACC1	Q00955	2233 aa	Known RBP	4.99	□□□□□ -1.61
EDC3	YEL015W	YER145C-A	A0A023PYF4	145 aa		4.99	□□□□□ -1.61
EDC3	YEL015W	COX23	P38824	151 aa		4.99	□□□□□ -1.61
EDC3	YEL015W	CCW12	Q12127	133 aa		4.99	□□□□□ -1.61
EDC3	YEL015W	YDR010C	Q12426	110 aa		4.99	□□□□□ -1.61
EDC3	YEL015W	YNL042W-B	Q3E7Z2	85 aa		4.99	□□□□□ -1.61
EDC3	YEL015W	YMR122W-A	Q3E842	84 aa		4.99	□□□□□ -1.61
EDC3	YEL015W	SOM1	Q05676	74 aa		4.99	□□□□□ -1.61
EDC3	YEL015W	YGL149W	P53116	101 aa		4.98	□□□□□ -1.61
EDC3	YEL015W	YGR025W	P53216	100 aa		4.98	□□□□□ -1.61
EDC3	YEL015W	LEE1	Q02799	301 aa	Known RBP	4.98	□□□□□ -1.61
EDC3	YEL015W	POL2	P21951	2222 aa	Known RBP	4.97	□□□□□ -1.61
EDC3	YEL015W	YCR001W	P25347	104 aa		4.96	□□□□□ -1.61
EDC3	YEL015W	YBR219C	P38317	127 aa		4.96	□□□□□ -1.61
EDC3	YEL015W	MRX7	P53869	86 aa		4.96	□□□□□ -1.61
EDC3	YEL015W	MRPS8	Q03799	155 aa		4.96	□□□□□ -1.61
EDC3	YEL015W	VAM10	Q08474	114 aa		4.96	□□□□□ -1.61
EDC3	YEL015W	YPR013C	Q12145	317 aa		4.96	□□□□□ -1.61
EDC3	YEL015W	SDH6	Q3E785	79 aa		4.96	□□□□□ -1.61
EDC3	YEL015W	EDC2	P40023	145 aa	Predicted RBP	4.96	□□□□□ -1.62
EDC3	YEL015W	FAS1	P07149	2051 aa	Known RBP	4.95	□□□□□ -1.62
EDC3	YEL015W	YLR157W-D	P0CE99	70 aa		4.95	□□□□□ -1.62
EDC3	YEL015W	YMR001C-A	Q8TGS9	76 aa		4.95	□□□□□ -1.62
EDC3	YEL015W	GLT1	Q12680	2145 aa	Known RBP	4.95	□□□□□ -1.62
EDC3	YEL015W	WWM1	P43582	211 aa	Known RBP	4.94	□□□□□ -1.62
EDC3	YEL015W	BSC4	P53841	131 aa		4.94	□□□□□ -1.62
EDC3	YEL015W	SNA2	P56508	79 aa		4.94	□□□□□ -1.62
EDC3	YEL015W	RPL39	P04650	51 aa		4.93	□□□□□ -1.62
EDC3	YEL015W	YOL013W-A	P0C272	63 aa	Predicted RBP	4.93	□□□□□ -1.62
EDC3	YEL015W	YIL046W-A	Q3E7Z4	54 aa		4.93	□□□□□ -1.62
EDC3	YEL015W	RPL29	P05747	59 aa	Predicted RBP	4.92	□□□□□ -1.62
EDC3	YEL015W	PMP3	P87284	55 aa		4.92	□□□□□ -1.62
EDC3	YEL015W	ATP17	Q06405	101 aa		4.92	□□□□□ -1.62
EDC3	YEL015W	FYV12	Q08559	129 aa		4.92	□□□□□ -1.62
EDC3	YEL015W	YHR213W-B	Q8TGK1	99 aa		4.92	□□□□□ -1.62
EDC3	YEL015W	AQY2	P0CD90	149 aa		4.91	□□□□□ -1.62
EDC3	YEL015W	BPH1	P25356	2167 aa		4.9	□□□□□ -1.62
EDC3	YEL015W	SEN1	Q00416	2231 aa	Known RBP	4.9	□□□□□ -1.62
EDC3	YEL015W	YAR023C	D6VPM8	179 aa		4.9	□□□□□ -1.62
EDC3	YEL015W	YJL197C-A	P0C5P0	93 aa		4.89	□□□□□ -1.63
EDC3	YEL015W	YNL146C-A	Q3E7Z1	64 aa		4.89	□□□□□ -1.63
EDC3	YEL015W	YBR182C-A	Q8TGU6	64 aa		4.89	□□□□□ -1.63
EDC3	YEL015W	BRR2	P32639	2163 aa	Known RBP	4.88	□□□□□ -1.63
EDC3	YEL015W	YHR125W	P38831	101 aa		4.87	□□□□□ -1.63
EDC3	YEL015W	YJL133C-A	Q3E7A3	74 aa		4.87	□□□□□ -1.63
EDC3	YEL015W	YKL097C	P34245	136 aa		4.86	□□□□□ -1.63
EDC3	YEL015W	YBR027C	P38220	110 aa		4.86	□□□□□ -1.63
EDC3	YEL015W	YOR011W-A	Q3E807	68 aa		4.86	□□□□□ -1.63
EDC3	YEL015W	YBL008W-A	Q3E821	79 aa		4.86	□□□□□ -1.63
EDC3	YEL015W	MVB12	P42939	101 aa		4.83	□□□□□ -1.64
EDC3	YEL015W	YNL122C	P53921	115 aa	Predicted RBP	4.83	□□□□□ -1.64
EDC3	YEL015W	YNL162W-A	Q3E7A8	72 aa		4.83	□□□□□ -1.64
EDC3	YEL015W	YDL241W	Q07738	123 aa		4.82	□□□□□ -1.64
EDC3	YEL015W	RTC6	O14464	93 aa		4.81	□□□□□ -1.64
EDC3	YEL015W	LCL2	Q08045	131 aa		4.81	□□□□□ -1.64
EDC3	YEL015W	FAB1	P34756	2278 aa		4.81	□□□□□ -1.64
EDC3	YEL015W	ECM19	Q06011	112 aa		4.8	□□□□□ -1.64
EDC3	YEL015W	YBR230W-A	Q3E762	66 aa		4.8	□□□□□ -1.64
EDC3	YEL015W	YJL127C-B	Q3E828	52 aa		4.8	□□□□□ -1.64
EDC3	YEL015W	YLR307C-A	Q3E825	87 aa		4.79	□□□□□ -1.64
EDC3	YEL015W	AUA1	P32450	94 aa		4.78	□□□□□ -1.64
EDC3	YEL015W	YCL048W-A	Q2V2Q2	79 aa		4.78	□□□□□ -1.64
EDC3	YEL015W	YPL278C	Q08990	100 aa		4.77	□□□□□ -1.65
EDC3	YEL015W	MRP10	O75012	95 aa		4.77	□□□□□ -1.65
EDC3	YEL015W	YBL039W-B	P0C268	59 aa		4.76	□□□□□ -1.65
EDC3	YEL015W	YGL014C-A	P0C5N1	53 aa		4.74	□□□□□ -1.65
EDC3	YEL015W	YAR064W	P39563	99 aa		4.74	□□□□□ -1.65
EDC3	YEL015W	SGF11	Q03067	99 aa		4.74	□□□□□ -1.65
EDC3	YEL015W	HOR7	Q05827	59 aa		4.73	□□□□□ -1.65
EDC3	YEL015W	Q0032	Q9ZZX7	96 aa		4.73	□□□□□ -1.65
EDC3	YEL015W	IGD1	P43598	195 aa		4.72	□□□□□ -1.65
EDC3	YEL015W	DDR2	P89113	61 aa		4.71	□□□□□ -1.66
EDC3	YEL015W	RPC10	P40422	70 aa		4.68	□□□□□ -1.66
EDC3	YEL015W	YER175W-A	Q8TGU4	54 aa		4.68	□□□□□ -1.66
EDC3	YEL015W	YDL012C	Q12489	107 aa		4.64	□□□□□ -1.67
EDC3	YEL015W	YOL097W-A	Q3E7Y9	61 aa		4.63	□□□□□ -1.67
EDC3	YEL015W	RDS3	Q06835	107 aa	Predicted RBP	4.62	□□□□□ -1.67
EDC3	YEL015W	YGR240C-A	Q3E786	66 aa		4.62	□□□□□ -1.67
EDC3	YEL015W	YCR041W	P37265	110 aa		4.61	□□□□□ -1.67
EDC3	YEL015W	YHR007C-A	Q07074	71 aa		4.61	□□□□□ -1.67
EDC3	YEL015W	YOR072W	Q08486	104 aa		4.61	□□□□□ -1.67
EDC3	YEL015W	YDR210W	Q03482	75 aa		4.58	□□□□□ -1.68
EDC3	YEL015W	COX8	P04039	78 aa		4.57	□□□□□ -1.68
EDC3	YEL015W	YBR201C-A	Q2V2Q3	67 aa		4.57	□□□□□ -1.68
EDC3	YEL015W	TAR1	Q8TGM6	124 aa		4.57	□□□□□ -1.68
EDC3	YEL015W	YER078W-A	Q3E7A2	54 aa		4.56	□□□□□ -1.68
EDC3	YEL015W	YEL014C	P39999	101 aa		4.51	□□□□□ -1.69
EDC3	YEL015W	CMC4	Q3E7A9	73 aa		4.5	□□□□□ -1.69
EDC3	YEL015W	RPL33A	P05744	107 aa	Known RBP	4.49	□□□□□ -1.69
EDC3	YEL015W	RPL33B	P41056	107 aa	Known RBP	4.49	□□□□□ -1.69
EDC3	YEL015W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
EDC3	YEL015W	YGR146C-A	Q8TGT9	53 aa		4.49	□□□□□ -1.69
EDC3	YEL015W	YLR255C	O13574	117 aa		4.48	□□□□□ -1.69
EDC3	YEL015W	YLR122C	Q12312	125 aa		4.48	□□□□□ -1.69
EDC3	YEL015W	YJR128W	P47162	119 aa		4.48	□□□□□ -1.69
EDC3	YEL015W	YCL042W	P25572	119 aa		4.46	□□□□□ -1.7
EDC3	YEL015W	IRA2	P19158	3079 aa		4.46	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms