RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	PAU5	P43575	122 aa		0.41	□□□□□ -2.34
SHE9	YDR393W	SHH4	Q06236	168 aa		0.41	□□□□□ -2.34
SHE9	YDR393W	HPA2	Q06592	156 aa		0.41	□□□□□ -2.34
SHE9	YDR393W	YOR072W	Q08486	104 aa		0.41	□□□□□ -2.34
SHE9	YDR393W	YOR381W-A	Q3E804	55 aa		0.41	□□□□□ -2.34
SHE9	YDR393W	YJL127C-B	Q3E828	52 aa		0.41	□□□□□ -2.34
SHE9	YDR393W	YNR034W-A	Q3E841	98 aa		0.41	□□□□□ -2.34
SHE9	YDR393W	RPL29	P05747	59 aa	Predicted RBP	0.4	□□□□□ -2.35
SHE9	YDR393W	YDL022C-A	P0C5L6	82 aa		0.4	□□□□□ -2.35
SHE9	YDR393W	GCV3	P39726	170 aa	Predicted RBP	0.4	□□□□□ -2.35
SHE9	YDR393W	RSM18	P40033	138 aa		0.4	□□□□□ -2.35
SHE9	YDR393W	YNL190W	P53872	204 aa		0.4	□□□□□ -2.35
SHE9	YDR393W	RPL36B	O14455	100 aa	Known RBP	0.39	□□□□□ -2.35
SHE9	YDR393W	YHR073W-A	P0C5N7	58 aa		0.39	□□□□□ -2.35
SHE9	YDR393W	YKR041W	P36134	250 aa		0.39	□□□□□ -2.35
SHE9	YDR393W	SHG1	P38337	142 aa		0.39	□□□□□ -2.35
SHE9	YDR393W	YGL230C	P53074	147 aa		0.39	□□□□□ -2.35
SHE9	YDR393W	JAC1	P53193	184 aa		0.39	□□□□□ -2.35
SHE9	YDR393W	MRPS12	P53732	153 aa		0.39	□□□□□ -2.35
SHE9	YDR393W	AIM11	P87275	137 aa		0.39	□□□□□ -2.35
SHE9	YDR393W	MGR2	Q02889	113 aa		0.39	□□□□□ -2.35
SHE9	YDR393W	COX19	Q3E731	98 aa		0.39	□□□□□ -2.35
SHE9	YDR393W	YLR361C-A	Q3E795	98 aa		0.39	□□□□□ -2.35
SHE9	YDR393W	YLR157W-D	P0CE99	70 aa		0.38	□□□□□ -2.35
SHE9	YDR393W	HMRA1	P0CY11	126 aa		0.38	□□□□□ -2.35
SHE9	YDR393W	FYV5	P25585	152 aa		0.38	□□□□□ -2.35
SHE9	YDR393W	GSP1	P32835	219 aa	Known RBP	0.38	□□□□□ -2.35
SHE9	YDR393W	YBR016W	P38216	128 aa		0.38	□□□□□ -2.35
SHE9	YDR393W	EDC1	P53080	175 aa	Predicted RBP	0.38	□□□□□ -2.35
SHE9	YDR393W	COF1	Q03048	143 aa	Known RBP	0.38	□□□□□ -2.35
SHE9	YDR393W	IRC21	Q04772	201 aa		0.38	□□□□□ -2.35
SHE9	YDR393W	YDL157C	Q12082	118 aa		0.38	□□□□□ -2.35
SHE9	YDR393W	YOR034C-A	Q3E735	80 aa		0.38	□□□□□ -2.35
SHE9	YDR393W	RAD6	P06104	172 aa		0.37	□□□□□ -2.35
SHE9	YDR393W	FUN14	P18411	198 aa		0.37	□□□□□ -2.35
SHE9	YDR393W	YER187W	P40102	141 aa		0.37	□□□□□ -2.35
SHE9	YDR393W	ICY1	Q04329	127 aa		0.37	□□□□□ -2.35
SHE9	YDR393W	YPL261C	Q08976	102 aa		0.37	□□□□□ -2.35
SHE9	YDR393W	FYV7	Q12247	151 aa		0.37	□□□□□ -2.35
SHE9	YDR393W	YOL097W-A	Q3E7Y9	61 aa		0.37	□□□□□ -2.35
SHE9	YDR393W	ATP5	P09457	212 aa		0.36	□□□□□ -2.35
SHE9	YDR393W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.36	□□□□□ -2.35
SHE9	YDR393W	FYV4	P38783	130 aa	Predicted RBP	0.36	□□□□□ -2.35
SHE9	YDR393W	PHS1	P40857	217 aa		0.36	□□□□□ -2.35
SHE9	YDR393W	ERV14	P53173	138 aa		0.36	□□□□□ -2.35
SHE9	YDR393W	YMR103C	Q04436	120 aa		0.36	□□□□□ -2.35
SHE9	YDR393W	PAU17	Q12370	124 aa		0.36	□□□□□ -2.35
SHE9	YDR393W	YHR213W-B	Q8TGK1	99 aa		0.36	□□□□□ -2.35
SHE9	YDR393W	HSP10	P38910	106 aa		0.35	□□□□□ -2.35
SHE9	YDR393W	SNN1	P48232	102 aa		0.35	□□□□□ -2.35
SHE9	YDR393W	YPR153W	Q06537	140 aa		0.34	□□□□□ -2.35
SHE9	YDR393W	YLR050C	Q12155	161 aa	Known RBP	0.34	□□□□□ -2.35
SHE9	YDR393W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.34	□□□□□ -2.35
SHE9	YDR393W	MIC10	Q96VH5	97 aa		0.34	□□□□□ -2.35
SHE9	YDR393W	NHP6A	P11632	93 aa	Known RBP	0.33	□□□□□ -2.36
SHE9	YDR393W	YBL044W	P38194	122 aa		0.33	□□□□□ -2.36
SHE9	YDR393W	APS2	Q00381	147 aa		0.33	□□□□□ -2.36
SHE9	YDR393W	PAU23	Q07987	124 aa		0.33	□□□□□ -2.36
SHE9	YDR393W	HHY1	P39982	102 aa		0.32	□□□□□ -2.36
SHE9	YDR393W	YGR164W	P53291	111 aa		0.32	□□□□□ -2.36
SHE9	YDR393W	HHO1	P53551	258 aa		0.32	□□□□□ -2.36
SHE9	YDR393W	VMA9	Q3E7B6	73 aa		0.32	□□□□□ -2.36
SHE9	YDR393W	YOR316C-A	Q3E806	69 aa		0.32	□□□□□ -2.36
SHE9	YDR393W	YML054C-A	Q3E809	52 aa		0.32	□□□□□ -2.36
SHE9	YDR393W	SCS22	Q6Q595	175 aa		0.32	□□□□□ -2.36
SHE9	YDR393W	RSM19	P53733	91 aa	Predicted RBP	0.32	□□□□□ -2.36
SHE9	YDR393W	YJL133C-A	Q3E7A3	74 aa		0.32	□□□□□ -2.36
SHE9	YDR393W	VMA21	P41806	77 aa		0.31	□□□□□ -2.36
SHE9	YDR393W	SFT1	P43682	97 aa		0.31	□□□□□ -2.36
SHE9	YDR393W	YLR255C	O13574	117 aa		0.3	□□□□□ -2.36
SHE9	YDR393W	RPS30A	P0CX33	63 aa	Known RBP	0.3	□□□□□ -2.36
SHE9	YDR393W	RPS30B	P0CX34	63 aa	Known RBP	0.3	□□□□□ -2.36
SHE9	YDR393W	LIP1	Q03579	150 aa		0.3	□□□□□ -2.36
SHE9	YDR393W	ATP14	Q12349	124 aa		0.3	□□□□□ -2.36
SHE9	YDR393W	YHR130C	P38834	111 aa		0.29	□□□□□ -2.36
SHE9	YDR393W	ICS3	P47034	131 aa		0.29	□□□□□ -2.36
SHE9	YDR393W	RPL36A	P05745	100 aa	Predicted RBP	0.28	□□□□□ -2.36
SHE9	YDR393W	YFR009W-A	P0C5M9	85 aa		0.28	□□□□□ -2.36
SHE9	YDR393W	ATG8	P38182	117 aa	RIP-Chip data	0.28	□□□□□ -2.36	not detected
SHE9	YDR393W	ARL3	Q02804	198 aa		0.28	□□□□□ -2.36
SHE9	YDR393W	MRPL44	P19956	98 aa		0.27	□□□□□ -2.37
SHE9	YDR393W	SRB6	P32570	121 aa		0.27	□□□□□ -2.37
SHE9	YDR393W	YEL014C	P39999	101 aa		0.27	□□□□□ -2.37
SHE9	YDR393W	HUR1	P45820	110 aa		0.27	□□□□□ -2.37
SHE9	YDR393W	YJR107C-A	P0CT86	78 aa		0.26	□□□□□ -2.37
SHE9	YDR393W	INO4	P13902	151 aa		0.26	□□□□□ -2.37
SHE9	YDR393W	NHP2	P32495	156 aa	Predicted RBP	0.26	□□□□□ -2.37
SHE9	YDR393W	GLC8	P41818	229 aa		0.26	□□□□□ -2.37
SHE9	YDR393W	YLR296W	Q05898	108 aa		0.26	□□□□□ -2.37
SHE9	YDR393W	YIL156W-B	Q2V2P4	73 aa		0.26	□□□□□ -2.37
SHE9	YDR393W	YKL044W	P36092	106 aa		0.25	□□□□□ -2.37
SHE9	YDR393W	ATP18	P81450	59 aa		0.25	□□□□□ -2.37
SHE9	YDR393W	AIM4	P38305	123 aa	Predicted RBP	0.24	□□□□□ -2.37
SHE9	YDR393W	COX23	P38824	151 aa		0.24	□□□□□ -2.37
SHE9	YDR393W	MSL1	P40567	111 aa	Predicted RBP	0.24	□□□□□ -2.37
SHE9	YDR393W	GTT1	P40582	234 aa		0.24	□□□□□ -2.37
SHE9	YDR393W	RPL38	P49167	78 aa	Known RBP	0.24	□□□□□ -2.37
SHE9	YDR393W	COA6	Q3E846	104 aa		0.24	□□□□□ -2.37
SHE9	YDR393W	YOR304C-A	O14468	76 aa		0.23	□□□□□ -2.37
SHE9	YDR393W	POP7	P38291	140 aa		0.23	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms