RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	RIP-Chip
SKP1	YDR328C	YJL127C-B	Q3E828	52 aa		4.76	□□□□□ -1.65
SKP1	YDR328C	RAD6	P06104	172 aa		4.75	□□□□□ -1.65
SKP1	YDR328C	YER039C-A	P0CD97	72 aa		4.75	□□□□□ -1.65
SKP1	YDR328C	KRE1	P17260	313 aa		4.75	□□□□□ -1.65
SKP1	YDR328C	MPC3	P53311	146 aa		4.75	□□□□□ -1.65
SKP1	YDR328C	OST2	P46964	130 aa		4.74	□□□□□ -1.65
SKP1	YDR328C	SPT4	P32914	102 aa	Predicted RBP	4.73	□□□□□ -1.65
SKP1	YDR328C	YLR156W	P0CE96	114 aa		4.72	□□□□□ -1.65
SKP1	YDR328C	YLR159W	P0CE97	114 aa		4.72	□□□□□ -1.65
SKP1	YDR328C	YLR161W	P0CE98	114 aa		4.72	□□□□□ -1.65
SKP1	YDR328C	DDR2	P89113	61 aa		4.72	□□□□□ -1.65
SKP1	YDR328C	YLR415C	O13578	112 aa		4.71	□□□□□ -1.66
SKP1	YDR328C	DSE2	P38844	325 aa		4.7	□□□□□ -1.66
SKP1	YDR328C	SFT1	P43682	97 aa		4.7	□□□□□ -1.66
SKP1	YDR328C	MMS2	P53152	137 aa		4.7	□□□□□ -1.66
SKP1	YDR328C	YJR107C-A	P0CT86	78 aa		4.69	□□□□□ -1.66
SKP1	YDR328C	RPA12	P32529	125 aa	Known RBP	4.68	□□□□□ -1.66
SKP1	YDR328C	YBL112C	Q3E7Y4	105 aa		4.68	□□□□□ -1.66
SKP1	YDR328C	BET1	P22804	142 aa		4.67	□□□□□ -1.66
SKP1	YDR328C	EDC2	P40023	145 aa	Predicted RBP	4.67	□□□□□ -1.66
SKP1	YDR328C	SBH1	P52870	82 aa		4.67	□□□□□ -1.66
SKP1	YDR328C	YGR121W-A	Q3E816	71 aa		4.67	□□□□□ -1.66
SKP1	YDR328C	YGR039W	P53225	103 aa		4.66	□□□□□ -1.66
SKP1	YDR328C	BSC4	P53841	131 aa		4.66	□□□□□ -1.66
SKP1	YDR328C	YCR085W	P25650	117 aa		4.65	□□□□□ -1.67
SKP1	YDR328C	YHR007C-A	Q07074	71 aa		4.65	□□□□□ -1.67
SKP1	YDR328C	YDR119W-A	Q2V2P9	66 aa		4.65	□□□□□ -1.67
SKP1	YDR328C	YFL041W-A	Q3E817	63 aa		4.65	□□□□□ -1.67
SKP1	YDR328C	YAL063C-A	Q3E791	96 aa		4.64	□□□□□ -1.67
SKP1	YDR328C	KTI11	Q3E840	82 aa		4.64	□□□□□ -1.67
SKP1	YDR328C	RPL36B	O14455	100 aa	Known RBP	4.63	□□□□□ -1.67
SKP1	YDR328C	SAP30	P38429	201 aa		4.63	□□□□□ -1.67
SKP1	YDR328C	SPG1	P50088	95 aa		4.63	□□□□□ -1.67
SKP1	YDR328C	ATP18	P81450	59 aa		4.63	□□□□□ -1.67
SKP1	YDR328C	YOR072W	Q08486	104 aa		4.63	□□□□□ -1.67
SKP1	YDR328C	TSC3	Q3E790	80 aa		4.63	□□□□□ -1.67
SKP1	YDR328C	YFR009W-A	P0C5M9	85 aa		4.62	□□□□□ -1.67
SKP1	YDR328C	DDR48	P18899	430 aa	Known RBP	4.62	□□□□□ -1.67
SKP1	YDR328C	YJR085C	P47131	105 aa	Known RBP	4.62	□□□□□ -1.67
SKP1	YDR328C	PBI2	P0CT04	75 aa	Known RBP	4.6	□□□□□ -1.67
SKP1	YDR328C	YDR381C-A	Q3E6R5	114 aa		4.6	□□□□□ -1.67
SKP1	YDR328C	YLR412C-A	Q3E742	68 aa		4.6	□□□□□ -1.67
SKP1	YDR328C	YOR268C	Q08734	132 aa		4.59	□□□□□ -1.67
SKP1	YDR328C	YMR230W-A	Q3E7B5	62 aa		4.59	□□□□□ -1.67
SKP1	YDR328C	TDA8	Q6B2U8	126 aa		4.59	□□□□□ -1.67
SKP1	YDR328C	YHR139C-A	O13536	103 aa		4.58	□□□□□ -1.68
SKP1	YDR328C	TOM6	P33448	61 aa		4.57	□□□□□ -1.68
SKP1	YDR328C	RSM18	P40033	138 aa		4.57	□□□□□ -1.68
SKP1	YDR328C	YGL149W	P53116	101 aa		4.57	□□□□□ -1.68
SKP1	YDR328C	YFL067W	P43537	175 aa		4.56	□□□□□ -1.68
SKP1	YDR328C	RSM19	P53733	91 aa	Predicted RBP	4.56	□□□□□ -1.68
SKP1	YDR328C	YKL183C-A	Q3E765	70 aa		4.56	□□□□□ -1.68
SKP1	YDR328C	YHL042W	P38729	150 aa		4.55	□□□□□ -1.68
SKP1	YDR328C	SKI6	P46948	246 aa	Predicted RBP	4.55	□□□□□ -1.68
SKP1	YDR328C	ICS3	P47034	131 aa		4.55	□□□□□ -1.68
SKP1	YDR328C	YGR164W	P53291	111 aa		4.55	□□□□□ -1.68
SKP1	YDR328C	COF1	Q03048	143 aa	Known RBP	4.55	□□□□□ -1.68
SKP1	YDR328C	YPL038W-A	Q3E7B4	63 aa		4.55	□□□□□ -1.68
SKP1	YDR328C	YHR213W-B	Q8TGK1	99 aa		4.55	□□□□□ -1.68
SKP1	YDR328C	YJL197C-A	P0C5P0	93 aa		4.54	□□□□□ -1.68
SKP1	YDR328C	YBR027C	P38220	110 aa		4.54	□□□□□ -1.68
SKP1	YDR328C	SHH4	Q06236	168 aa		4.54	□□□□□ -1.68
SKP1	YDR328C	YCR050C	P25630	102 aa		4.53	□□□□□ -1.68
SKP1	YDR328C	EDC1	P53080	175 aa	Predicted RBP	4.53	□□□□□ -1.68
SKP1	YDR328C	YHL018W	P38744	120 aa	Predicted RBP	4.51	□□□□□ -1.69
SKP1	YDR328C	COX23	P38824	151 aa		4.51	□□□□□ -1.69
SKP1	YDR328C	YDR010C	Q12426	110 aa		4.51	□□□□□ -1.69
SKP1	YDR328C	YJL133C-A	Q3E7A3	74 aa		4.51	□□□□□ -1.69
SKP1	YDR328C	ECM19	Q06011	112 aa		4.5	□□□□□ -1.69
SKP1	YDR328C	YNL277W-A	Q3E7Z0	62 aa		4.5	□□□□□ -1.69
SKP1	YDR328C	KSH1	Q8TGJ3	72 aa		4.5	□□□□□ -1.69
SKP1	YDR328C	YLR162W	Q06235	118 aa		4.49	□□□□□ -1.69
SKP1	YDR328C	MIC10	Q96VH5	97 aa		4.49	□□□□□ -1.69
SKP1	YDR328C	YEL045C	P32616	141 aa		4.48	□□□□□ -1.69
SKP1	YDR328C	YOL014W	Q08110	124 aa		4.48	□□□□□ -1.69
SKP1	YDR328C	TDA2	P40045	126 aa		4.47	□□□□□ -1.69
SKP1	YDR328C	RPL38	P49167	78 aa	Known RBP	4.47	□□□□□ -1.69
SKP1	YDR328C	HOT13	P36078	116 aa		4.44	□□□□□ -1.7
SKP1	YDR328C	EMC6	Q12431	108 aa		4.44	□□□□□ -1.7
SKP1	YDR328C	YOL097W-A	Q3E7Y9	61 aa		4.44	□□□□□ -1.7
SKP1	YDR328C	YLR157W-D	P0CE99	70 aa		4.42	□□□□□ -1.7
SKP1	YDR328C	ATP20	Q12233	115 aa		4.42	□□□□□ -1.7
SKP1	YDR328C	YSY6	P38374	65 aa		4.41	□□□□□ -1.7
SKP1	YDR328C	YER187W	P40102	141 aa		4.4	□□□□□ -1.71
SKP1	YDR328C	YLR285C-A	Q3E771	56 aa		4.4	□□□□□ -1.71
SKP1	YDR328C	YBR182C-A	Q8TGU6	64 aa		4.4	□□□□□ -1.71
SKP1	YDR328C	YCR043C	P25361	127 aa		4.36	□□□□□ -1.71
SKP1	YDR328C	YHL005C	P38752	130 aa		4.36	□□□□□ -1.71
SKP1	YDR328C	YDR246W-A	Q3E763	66 aa		4.35	□□□□□ -1.71
SKP1	YDR328C	YAR064W	P39563	99 aa		4.31	□□□□□ -1.72
SKP1	YDR328C	RPL36A	P05745	100 aa	Predicted RBP	4.3	□□□□□ -1.72
SKP1	YDR328C	AIM4	P38305	123 aa	Predicted RBP	4.3	□□□□□ -1.72
SKP1	YDR328C	YDL012C	Q12489	107 aa		4.29	□□□□□ -1.72
SKP1	YDR328C	YHR073W-A	P0C5N7	58 aa		4.27	□□□□□ -1.73
SKP1	YDR328C	HHF1	P02309	103 aa	Known RBP	4.26	□□□□□ -1.73
SKP1	YDR328C	COX7	P10174	60 aa		4.26	□□□□□ -1.73
SKP1	YDR328C	CMC4	Q3E7A9	73 aa		4.26	□□□□□ -1.73
SKP1	YDR328C	YOR314W	Q12506	109 aa		4.25	□□□□□ -1.73
SKP1	YDR328C	YNL122C	P53921	115 aa	Predicted RBP	4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms