RNA–Protein interactions for RNA: YDR312W

SSF2, Transcript of Protein required for ribosomal large subunit maturation, yeastyeast

Gene SSF2, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSF2YDR312W RPL36BO14455 100 aaKnown RBP0.87□□□□□ -2.27
SSF2YDR312W RPL36AP05745 100 aaPredicted RBP0.87□□□□□ -2.27
SSF2YDR312W PAU19P0CE85 124 aa0.87□□□□□ -2.27
SSF2YDR312W PAU21P0CE86 164 aa0.87□□□□□ -2.27
SSF2YDR312W PAU22P0CE87 164 aa0.87□□□□□ -2.27
SSF2YDR312W PAU3P25610 124 aa0.87□□□□□ -2.27
SSF2YDR312W PAU15P40585 124 aa0.87□□□□□ -2.27
SSF2YDR312W ACP1P32463 125 aa0.86□□□□□ -2.27
SSF2YDR312W POP7P38291 140 aa0.86□□□□□ -2.27
SSF2YDR312W PHS1P40857 217 aa0.86□□□□□ -2.27
SSF2YDR312W YDR042CQ03205 200 aa0.86□□□□□ -2.27
SSF2YDR312W YDR210WQ03482 75 aa0.86□□□□□ -2.27
SSF2YDR312W YGR121W-AQ3E816 71 aa0.86□□□□□ -2.27
SSF2YDR312W YER039C-AP0CD97 72 aa0.85□□□□□ -2.27
SSF2YDR312W GSP1P32835 219 aaKnown RBP0.85□□□□□ -2.27
SSF2YDR312W YBR090CP38253 122 aa0.85□□□□□ -2.27
SSF2YDR312W YHL005CP38752 130 aa0.85□□□□□ -2.27
SSF2YDR312W VMA7P39111 118 aa0.85□□□□□ -2.27
SSF2YDR312W HPA2Q06592 156 aa0.85□□□□□ -2.27
SSF2YDR312W YOR105WQ08504 108 aa0.85□□□□□ -2.27
SSF2YDR312W YPL225WQ08971 146 aaKnown RBP0.85□□□□□ -2.27
SSF2YDR312W PAU16P35994 123 aa0.84□□□□□ -2.27
SSF2YDR312W YAR029WP39549 74 aa0.84□□□□□ -2.27
SSF2YDR312W ERV14P53173 138 aa0.84□□□□□ -2.27
SSF2YDR312W SAE3P89114 91 aa0.84□□□□□ -2.27
SSF2YDR312W GPI19Q04082 140 aa0.84□□□□□ -2.27
SSF2YDR312W YBL039W-BP0C268 59 aa0.83□□□□□ -2.28
SSF2YDR312W DDR2P89113 61 aa0.83□□□□□ -2.28
SSF2YDR312W COX7P10174 60 aa0.83□□□□□ -2.28
SSF2YDR312W RPB11P38902 120 aa0.83□□□□□ -2.28
SSF2YDR312W YLR361C-AQ3E795 98 aa0.83□□□□□ -2.28
SSF2YDR312W Q0017Q9ZZX8 53 aa0.83□□□□□ -2.28
SSF2YDR312W AIM4P38305 123 aaPredicted RBP0.82□□□□□ -2.28
SSF2YDR312W CYB5P40312 120 aa0.82□□□□□ -2.28
SSF2YDR312W YBR292CP38357 123 aa0.81□□□□□ -2.28
SSF2YDR312W SHU1P38751 150 aa0.81□□□□□ -2.28
SSF2YDR312W YKL023C-AQ2V2P3 75 aa0.81□□□□□ -2.28
SSF2YDR312W YCL001W-BQ96VH2 84 aa0.81□□□□□ -2.28
SSF2YDR312W SFT1P43682 97 aa0.8□□□□□ -2.28
SSF2YDR312W PAU4P53427 120 aa0.8□□□□□ -2.28
SSF2YDR312W SLO1Q3E784 85 aa0.8□□□□□ -2.28
SSF2YDR312W YOR008C-AQ3E7B9 74 aa0.8□□□□□ -2.28
SSF2YDR312W PAU1P0CE88 120 aa0.79□□□□□ -2.28
SSF2YDR312W PAU14P0CE89 120 aa0.79□□□□□ -2.28
SSF2YDR312W PAU6P0CE90 120 aa0.79□□□□□ -2.28
SSF2YDR312W PAU18P0CE91 120 aa0.79□□□□□ -2.28
SSF2YDR312W PAU8P0CE92 120 aa0.79□□□□□ -2.28
SSF2YDR312W PAU11P0CE93 120 aa0.79□□□□□ -2.28
SSF2YDR312W PAU13P38725 120 aa0.79□□□□□ -2.28
SSF2YDR312W YJR128WP47162 119 aa0.79□□□□□ -2.28
SSF2YDR312W BSC4P53841 131 aa0.79□□□□□ -2.28
SSF2YDR312W ARL3Q02804 198 aa0.79□□□□□ -2.28
SSF2YDR312W PAU10Q03050 120 aa0.79□□□□□ -2.28
SSF2YDR312W PAU20Q08322 120 aa0.79□□□□□ -2.28
SSF2YDR312W YOR034C-AQ3E735 80 aa0.79□□□□□ -2.28
SSF2YDR312W PAU9Q3E770 120 aa0.79□□□□□ -2.28
SSF2YDR312W YKL044WP36092 106 aa0.78□□□□□ -2.28
SSF2YDR312W PAU7P39545 55 aa0.78□□□□□ -2.28
SSF2YDR312W PAU5P43575 122 aa0.78□□□□□ -2.28
SSF2YDR312W YNL190WP53872 204 aa0.77□□□□□ -2.29
SSF2YDR312W AIM11P87275 137 aa0.77□□□□□ -2.29
SSF2YDR312W YNL042W-BQ3E7Z2 85 aa0.77□□□□□ -2.29
SSF2YDR312W YLR157W-EP0CF00 54 aa0.76□□□□□ -2.29
SSF2YDR312W TDA2P40045 126 aa0.76□□□□□ -2.29
SSF2YDR312W ICS3P47034 131 aa0.76□□□□□ -2.29
SSF2YDR312W TOS6P48560 102 aa0.76□□□□□ -2.29
SSF2YDR312W RPL29P05747 59 aaPredicted RBP0.75□□□□□ -2.29
SSF2YDR312W COX19Q3E731 98 aa0.75□□□□□ -2.29
SSF2YDR312W YLL006W-AQ3E814 58 aa0.75□□□□□ -2.29
SSF2YDR312W HMRA1P0CY11 126 aa0.74□□□□□ -2.29
SSF2YDR312W GCV3P39726 170 aaPredicted RBP0.74□□□□□ -2.29
SSF2YDR312W YIL014C-AQ02598 104 aa0.74□□□□□ -2.29
SSF2YDR312W YBR230W-AQ3E762 66 aa0.74□□□□□ -2.29
SSF2YDR312W YJL127C-BQ3E828 52 aa0.74□□□□□ -2.29
SSF2YDR312W HMRA2P0CY13 119 aa0.73□□□□□ -2.29
SSF2YDR312W APS2Q00381 147 aa0.73□□□□□ -2.29
SSF2YDR312W YGL194C-AQ2V2P6 80 aa0.73□□□□□ -2.29
SSF2YDR312W WIP1Q2V2P8 89 aa0.73□□□□□ -2.29
SSF2YDR312W YLR363W-AQ3E747 85 aa0.72□□□□□ -2.29
SSF2YDR312W YNR034W-AQ3E841 98 aa0.72□□□□□ -2.29
SSF2YDR312W YPL261CQ08976 102 aa0.71□□□□□ -2.3
SSF2YDR312W OST5Q92316 86 aa0.71□□□□□ -2.3
SSF2YDR312W YLR157W-DP0CE99 70 aa0.7□□□□□ -2.3
SSF2YDR312W YLR285C-AQ3E771 56 aa0.7□□□□□ -2.3
SSF2YDR312W YOL097W-AQ3E7Y9 61 aa0.7□□□□□ -2.3
SSF2YDR312W YOR376W-AQ3E805 51 aa0.7□□□□□ -2.3
SSF2YDR312W YHR073W-AP0C5N7 58 aa0.7□□□□□ -2.3
SSF2YDR312W YBR016WP38216 128 aa0.7□□□□□ -2.3
SSF2YDR312W YHR130CP38834 111 aa0.7□□□□□ -2.3
SSF2YDR312W SNN1P48232 102 aa0.7□□□□□ -2.3
SSF2YDR312W ICY1Q04329 127 aa0.7□□□□□ -2.3
SSF2YDR312W RSM18P40033 138 aa0.69□□□□□ -2.3
SSF2YDR312W MRPS12P53732 153 aa0.69□□□□□ -2.3
SSF2YDR312W FYV7Q12247 151 aa0.69□□□□□ -2.3
SSF2YDR312W COX23P38824 151 aa0.68□□□□□ -2.3
SSF2YDR312W GTT1P40582 234 aa0.68□□□□□ -2.3
SSF2YDR312W PAU17Q12370 124 aa0.68□□□□□ -2.3
SSF2YDR312W YDL022C-AP0C5L6 82 aa0.67□□□□□ -2.3
SSF2YDR312W YER187WP40102 141 aa0.66□□□□□ -2.3
SSF2YDR312W EDC1P53080 175 aaPredicted RBP0.65□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms