RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C YLR161WP0CE98 114 aa4.4□□□□□ -1.71
VPS61YDR136C YDR115WQ04598 105 aa4.4□□□□□ -1.71
VPS61YDR136C SPC1P46965 94 aa4.39□□□□□ -1.71
VPS61YDR136C YBR230W-AQ3E762 66 aa4.39□□□□□ -1.71
VPS61YDR136C STF1P01098 86 aa4.38□□□□□ -1.71
VPS61YDR136C FYV5P25585 152 aa4.38□□□□□ -1.71
VPS61YDR136C IGD1P43598 195 aa4.38□□□□□ -1.71
VPS61YDR136C YLR281CQ05863 155 aa4.38□□□□□ -1.71
VPS61YDR136C YLR307C-AQ3E825 87 aa4.38□□□□□ -1.71
VPS61YDR136C SFT1P43682 97 aa4.37□□□□□ -1.71
VPS61YDR136C YDR246W-AQ3E763 66 aa4.37□□□□□ -1.71
VPS61YDR136C YLL066W-BQ8TGJ7 56 aa4.37□□□□□ -1.71
VPS61YDR136C TOR1P35169 2470 aa4.37□□□□□ -1.71
VPS61YDR136C TDA2P40045 126 aa4.36□□□□□ -1.71
VPS61YDR136C RPL38P49167 78 aaKnown RBP4.36□□□□□ -1.71
VPS61YDR136C YLR361C-AQ3E795 98 aa4.36□□□□□ -1.71
VPS61YDR136C YJL127C-BQ3E828 52 aa4.36□□□□□ -1.71
VPS61YDR136C RSM18P40033 138 aa4.34□□□□□ -1.71
VPS61YDR136C YER187WP40102 141 aa4.34□□□□□ -1.71
VPS61YDR136C ATP20Q12233 115 aa4.34□□□□□ -1.71
VPS61YDR136C YKL183C-AQ3E765 70 aa4.34□□□□□ -1.71
VPS61YDR136C YNL042W-BQ3E7Z2 85 aa4.34□□□□□ -1.71
VPS61YDR136C RTC6O14464 93 aa4.33□□□□□ -1.72
VPS61YDR136C COX23P38824 151 aa4.33□□□□□ -1.72
VPS61YDR136C ICS3P47034 131 aa4.33□□□□□ -1.72
VPS61YDR136C YRA2P36036 203 aaKnown RBP RIP-Chip data4.32□□□□□ -1.72not detected
VPS61YDR136C BET1P22804 142 aa4.31□□□□□ -1.72
VPS61YDR136C YCL042WP25572 119 aa4.31□□□□□ -1.72
VPS61YDR136C YCR050CP25630 102 aa4.31□□□□□ -1.72
VPS61YDR136C AIM4P38305 123 aaPredicted RBP4.31□□□□□ -1.72
VPS61YDR136C Q0032Q9ZZX7 96 aa4.31□□□□□ -1.72
VPS61YDR136C YER039C-AP0CD97 72 aa4.3□□□□□ -1.72
VPS61YDR136C EDC2P40023 145 aaPredicted RBP4.3□□□□□ -1.72
VPS61YDR136C YOL014WQ08110 124 aa4.3□□□□□ -1.72
VPS61YDR136C YOR314WQ12506 109 aa4.3□□□□□ -1.72
VPS61YDR136C RRT15Q3E811 62 aa4.3□□□□□ -1.72
VPS61YDR136C YHR213W-BQ8TGK1 99 aa4.3□□□□□ -1.72
VPS61YDR136C UTP20P35194 2493 aaKnown RBP4.28□□□□□ -1.72
VPS61YDR136C YAR023CD6VPM8 179 aa4.28□□□□□ -1.72
VPS61YDR136C CUP1-1P0CX80 61 aa4.27□□□□□ -1.73
VPS61YDR136C CUP1-2P0CX81 61 aa4.27□□□□□ -1.73
VPS61YDR136C SPT4P32914 102 aaPredicted RBP4.27□□□□□ -1.73
VPS61YDR136C SNA2P56508 79 aa4.27□□□□□ -1.73
VPS61YDR136C YJL133C-AQ3E7A3 74 aa4.27□□□□□ -1.73
VPS61YDR136C YGL041C-BQ3E750 60 aa4.26□□□□□ -1.73
VPS61YDR136C NOP10Q6Q547 58 aaPredicted RBP4.26□□□□□ -1.73
VPS61YDR136C AUA1P32450 94 aa4.25□□□□□ -1.73
VPS61YDR136C ECM19Q06011 112 aa4.25□□□□□ -1.73
VPS61YDR136C RPL36BO14455 100 aaKnown RBP4.24□□□□□ -1.73
VPS61YDR136C SBH1P52870 82 aa4.24□□□□□ -1.73
VPS61YDR136C YDR182W-AQ3E796 67 aa4.24□□□□□ -1.73
VPS61YDR136C TDA8Q6B2U8 126 aa4.24□□□□□ -1.73
VPS61YDR136C RPL36AP05745 100 aaPredicted RBP4.23□□□□□ -1.73
VPS61YDR136C YGL193CP53097 103 aa4.23□□□□□ -1.73
VPS61YDR136C DDR2P89113 61 aa4.22□□□□□ -1.73
VPS61YDR136C YOR072WQ08486 104 aa4.22□□□□□ -1.73
VPS61YDR136C YOL166W-AQ8TGJ1 51 aa4.22□□□□□ -1.73
VPS61YDR136C PEX22P39718 180 aa4.21□□□□□ -1.74
VPS61YDR136C BSC4P53841 131 aa4.21□□□□□ -1.74
VPS61YDR136C YHR007C-AQ07074 71 aa4.21□□□□□ -1.74
VPS61YDR136C YEL045CP32616 141 aa4.2□□□□□ -1.74
VPS61YDR136C HOT13P36078 116 aa4.19□□□□□ -1.74
VPS61YDR136C GIS2P53849 153 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74not detected
VPS61YDR136C YLR162WQ06235 118 aa4.19□□□□□ -1.74
VPS61YDR136C MIC10Q96VH5 97 aa4.18□□□□□ -1.74
VPS61YDR136C YJL197C-AP0C5P0 93 aa4.16□□□□□ -1.74
VPS61YDR136C YIL102CP40488 101 aa4.16□□□□□ -1.74
VPS61YDR136C LIP1Q03579 150 aa4.16□□□□□ -1.74
VPS61YDR136C YHL005CP38752 130 aa4.14□□□□□ -1.75
VPS61YDR136C YGR121W-AQ3E816 71 aa4.13□□□□□ -1.75
VPS61YDR136C KTI11Q3E840 82 aa4.13□□□□□ -1.75
VPS61YDR136C KSH1Q8TGJ3 72 aa4.13□□□□□ -1.75
VPS61YDR136C NUM1Q00402 2748 aa4.13□□□□□ -1.75
VPS61YDR136C RPS30AP0CX33 63 aaKnown RBP4.12□□□□□ -1.75
VPS61YDR136C RPS30BP0CX34 63 aaKnown RBP4.12□□□□□ -1.75
VPS61YDR136C YGR164WP53291 111 aa4.12□□□□□ -1.75
VPS61YDR136C YER175W-AQ8TGU4 54 aa4.12□□□□□ -1.75
VPS61YDR136C YOL013W-AP0C272 63 aaPredicted RBP4.11□□□□□ -1.75
VPS61YDR136C YAR064WP39563 99 aa4.11□□□□□ -1.75
VPS61YDR136C YMR230W-AQ3E7B5 62 aa4.11□□□□□ -1.75
VPS61YDR136C DYN1P36022 4092 aa4.11□□□□□ -1.75
VPS61YDR136C YDR034C-AP0C289 58 aa4.1□□□□□ -1.75
VPS61YDR136C YBR121C-AP0C5L4 52 aa4.1□□□□□ -1.75
VPS61YDR136C YLR412C-AQ3E742 68 aa4.1□□□□□ -1.75
VPS61YDR136C SPG1P50088 95 aa4.08□□□□□ -1.76
VPS61YDR136C YCR043CP25361 127 aa4.07□□□□□ -1.76
VPS61YDR136C YJR085CP47131 105 aaKnown RBP4.06□□□□□ -1.76
VPS61YDR136C YPR195CQ06594 109 aa4.06□□□□□ -1.76
VPS61YDR136C YKL065W-AQ2V2P2 73 aa4.06□□□□□ -1.76
VPS61YDR136C YOR381W-AQ3E804 55 aa4.06□□□□□ -1.76
VPS61YDR136C RPS28BP0C0X0 67 aaKnown RBP4.05□□□□□ -1.76
VPS61YDR136C YPR153WQ06537 140 aa4.05□□□□□ -1.76
VPS61YDR136C RPS28AQ3E7X9 67 aaPredicted RBP4.05□□□□□ -1.76
VPS61YDR136C YLR157W-DP0CE99 70 aa4.04□□□□□ -1.76
VPS61YDR136C YBR027CP38220 110 aa4.04□□□□□ -1.76
VPS61YDR136C YOL097W-AQ3E7Y9 61 aa4.04□□□□□ -1.76
VPS61YDR136C YHR125WP38831 101 aa4.03□□□□□ -1.76
VPS61YDR136C YOR268CQ08734 132 aa4.03□□□□□ -1.76
VPS61YDR136C YDL012CQ12489 107 aa4.03□□□□□ -1.76
VPS61YDR136C HHF1P02309 103 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms