RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	PAU8	P0CE92	120 aa		1.4	□□□□□ -2.18
RPN5	YDL147W	PAU11	P0CE93	120 aa		1.4	□□□□□ -2.18
RPN5	YDL147W	PAU13	P38725	120 aa		1.4	□□□□□ -2.18
RPN5	YDL147W	PAU10	Q03050	120 aa		1.4	□□□□□ -2.18
RPN5	YDL147W	PAU9	Q3E770	120 aa		1.4	□□□□□ -2.18
RPN5	YDL147W	APC1	P53886	1748 aa		1.4	□□□□□ -2.19
RPN5	YDL147W	MOT1	P32333	1867 aa		1.4	□□□□□ -2.19
RPN5	YDL147W	PMD1	P32634	1753 aa		1.4	□□□□□ -2.19
RPN5	YDL147W	SNU13	P39990	126 aa	Known RBP	1.4	□□□□□ -2.19
RPN5	YDL147W	VMA9	Q3E7B6	73 aa		1.4	□□□□□ -2.19
RPN5	YDL147W	ECM29	P38737	1868 aa		1.39	□□□□□ -2.19
RPN5	YDL147W	SSS1	P35179	80 aa		1.39	□□□□□ -2.19
RPN5	YDL147W	RSM18	P40033	138 aa		1.38	□□□□□ -2.19
RPN5	YDL147W	SPC1	P46965	94 aa		1.38	□□□□□ -2.19
RPN5	YDL147W	YIL134C-A	Q45U18	67 aa		1.38	□□□□□ -2.19
RPN5	YDL147W	SUS1	Q6WNK7	96 aa		1.38	□□□□□ -2.19
RPN5	YDL147W	YOL131W	Q08270	108 aa		1.37	□□□□□ -2.19
RPN5	YDL147W	POC4	Q12245	148 aa	Predicted RBP	1.37	□□□□□ -2.19
RPN5	YDL147W	YNL198C	P40166	100 aa		1.36	□□□□□ -2.19
RPN5	YDL147W	PAU4	P53427	120 aa		1.36	□□□□□ -2.19
RPN5	YDL147W	YMR082C	Q04276	118 aa		1.36	□□□□□ -2.19
RPN5	YDL147W	RIM15	P43565	1770 aa		1.35	□□□□□ -2.19
RPN5	YDL147W	YDR042C	Q03205	200 aa		1.33	□□□□□ -2.2
RPN5	YDL147W	YDR029W	Q12111	104 aa		1.33	□□□□□ -2.2
RPN5	YDL147W	FIG2	P25653	1609 aa		1.32	□□□□□ -2.2
RPN5	YDL147W	LSM2	P38203	95 aa	Known RBP	1.32	□□□□□ -2.2
RPN5	YDL147W	YDR119W-A	Q2V2P9	66 aa		1.32	□□□□□ -2.2
RPN5	YDL147W	HKR1	P41809	1802 aa		1.32	□□□□□ -2.2
RPN5	YDL147W	STT4	P37297	1900 aa		1.31	□□□□□ -2.2
RPN5	YDL147W	SWM2	P40342	146 aa		1.31	□□□□□ -2.2
RPN5	YDL147W	PAU23	Q07987	124 aa		1.31	□□□□□ -2.2
RPN5	YDL147W	PAU17	Q12370	124 aa		1.31	□□□□□ -2.2
RPN5	YDL147W	RPA12	P32529	125 aa	Known RBP	1.3	□□□□□ -2.2
RPN5	YDL147W	CWP2	P43497	92 aa		1.3	□□□□□ -2.2
RPN5	YDL147W	TAO3	P40468	2376 aa		1.29	□□□□□ -2.2
RPN5	YDL147W	PAI3	P01094	68 aa		1.29	□□□□□ -2.2
RPN5	YDL147W	YMR175W-A	Q3E766	64 aa		1.29	□□□□□ -2.2
RPN5	YDL147W	YNL190W	P53872	204 aa		1.28	□□□□□ -2.2
RPN5	YDL147W	YCR085W	P25650	117 aa		1.27	□□□□□ -2.21
RPN5	YDL147W	YKL018C-A	Q3E7A7	99 aa		1.27	□□□□□ -2.21
RPN5	YDL147W	ECM12	O13529	151 aa		1.26	□□□□□ -2.21
RPN5	YDL147W	YIL102C-A	Q2V2P5	75 aa		1.25	□□□□□ -2.21
RPN5	YDL147W	MHF2	Q3E829	80 aa		1.25	□□□□□ -2.21
RPN5	YDL147W	RPC10	P40422	70 aa		1.24	□□□□□ -2.21
RPN5	YDL147W	YDR246W-A	Q3E763	66 aa		1.24	□□□□□ -2.21
RPN5	YDL147W	ATX1	P38636	73 aa		1.23	□□□□□ -2.21
RPN5	YDL147W	YFL041W-A	Q3E817	63 aa		1.23	□□□□□ -2.21
RPN5	YDL147W	BSC4	P53841	131 aa		1.22	□□□□□ -2.21
RPN5	YDL147W	YNL042W-B	Q3E7Z2	85 aa		1.22	□□□□□ -2.21
RPN5	YDL147W	FLO1	P32768	1537 aa		1.21	□□□□□ -2.21
RPN5	YDL147W	TIM12	P32830	109 aa		1.21	□□□□□ -2.22
RPN5	YDL147W	YDR381C-A	Q3E6R5	114 aa		1.21	□□□□□ -2.22
RPN5	YDL147W	TOM6	P33448	61 aa		1.2	□□□□□ -2.22
RPN5	YDL147W	YKL023C-A	Q2V2P3	75 aa		1.2	□□□□□ -2.22
RPN5	YDL147W	YDL022C-A	P0C5L6	82 aa		1.19	□□□□□ -2.22
RPN5	YDL147W	YHR214C-D	P0CX93	97 aa		1.19	□□□□□ -2.22
RPN5	YDL147W	RPL38	P49167	78 aa	Known RBP	1.19	□□□□□ -2.22
RPN5	YDL147W	EDC1	P53080	175 aa	Predicted RBP	1.19	□□□□□ -2.22
RPN5	YDL147W	YGR121W-A	Q3E816	71 aa		1.19	□□□□□ -2.22
RPN5	YDL147W	NHP2	P32495	156 aa	Predicted RBP	1.18	□□□□□ -2.22
RPN5	YDL147W	COA2	Q3E823	68 aa		1.18	□□□□□ -2.22
RPN5	YDL147W	COX7	P10174	60 aa		1.17	□□□□□ -2.22
RPN5	YDL147W	FPR2	P32472	135 aa		1.17	□□□□□ -2.22
RPN5	YDL147W	ERI1	P62651	68 aa	Known RBP	1.17	□□□□□ -2.22
RPN5	YDL147W	YOR192C-C	Q3E736	78 aa		1.17	□□□□□ -2.22
RPN5	YDL147W	YOR105W	Q08504	108 aa		1.16	□□□□□ -2.22
RPN5	YDL147W	YGR035W-A	Q45U48	73 aa		1.16	□□□□□ -2.22
RPN5	YDL147W	YLR146W-A	Q2V2P1	62 aa		1.15	□□□□□ -2.22
RPN5	YDL147W	Q0032	Q9ZZX7	96 aa		1.15	□□□□□ -2.22
RPN5	YDL147W	YAL065C	O13511	128 aa		1.15	□□□□□ -2.23
RPN5	YDL147W	SPI1	P40092	148 aa		1.15	□□□□□ -2.23
RPN5	YDL147W	YSY6	P38374	65 aa		1.14	□□□□□ -2.23
RPN5	YDL147W	YOR343C	Q12484	108 aa		1.14	□□□□□ -2.23
RPN5	YDL147W	YIL156W-B	Q2V2P4	73 aa		1.14	□□□□□ -2.23
RPN5	YDL147W	BPH1	P25356	2167 aa		1.13	□□□□□ -2.23
RPN5	YDL147W	YOR314W	Q12506	109 aa		1.13	□□□□□ -2.23
RPN5	YDL147W	YBR201C-A	Q2V2Q3	67 aa		1.13	□□□□□ -2.23
RPN5	YDL147W	YOR032W-A	Q8TGS1	66 aa		1.13	□□□□□ -2.23
RPN5	YDL147W	YOL166W-A	Q8TGJ1	51 aa		1.12	□□□□□ -2.23
RPN5	YDL147W	SEN1	Q00416	2231 aa	Known RBP	1.11	□□□□□ -2.23
RPN5	YDL147W	YJR107C-A	P0CT86	78 aa		1.11	□□□□□ -2.23
RPN5	YDL147W	QCR9	P22289	66 aa		1.11	□□□□□ -2.23
RPN5	YDL147W	COX9	P07255	59 aa		1.1	□□□□□ -2.23
RPN5	YDL147W	NOP10	Q6Q547	58 aa	Predicted RBP	1.1	□□□□□ -2.23
RPN5	YDL147W	RPS30A	P0CX33	63 aa	Known RBP	1.09	□□□□□ -2.24
RPN5	YDL147W	RPS30B	P0CX34	63 aa	Known RBP	1.09	□□□□□ -2.24
RPN5	YDL147W	TOM7	P53507	60 aa		1.07	□□□□□ -2.24
RPN5	YDL147W	YBR016W	P38216	128 aa		1.06	□□□□□ -2.24
RPN5	YDL147W	YKL065W-A	Q2V2P2	73 aa		1.06	□□□□□ -2.24
RPN5	YDL147W	YMR122W-A	Q3E842	84 aa		1.06	□□□□□ -2.24
RPN5	YDL147W	YDR182W-A	Q3E796	67 aa		1.04	□□□□□ -2.24
RPN5	YDL147W	PAU7	P39545	55 aa		1.03	□□□□□ -2.24
RPN5	YDL147W	YPR108W-A	Q3E7B3	70 aa		1.03	□□□□□ -2.24
RPN5	YDL147W	YFR009W-A	P0C5M9	85 aa		1.02	□□□□□ -2.25
RPN5	YDL147W	TOS6	P48560	102 aa		1.02	□□□□□ -2.25
RPN5	YDL147W	ATP18	P81450	59 aa		1.01	□□□□□ -2.25
RPN5	YDL147W	YPR010C-A	A5Z2X5	72 aa		1	□□□□□ -2.25
RPN5	YDL147W	ATP17	Q06405	101 aa		1	□□□□□ -2.25
RPN5	YDL147W	YGR025W	P53216	100 aa		0.99	□□□□□ -2.25
RPN5	YDL147W	YLR157W-D	P0CE99	70 aa		0.98	□□□□□ -2.25

Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms