RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C YAL063C-AQ3E791 96 aa3.23□□□□□ -1.89
SCM3YDL139C YJL127C-BQ3E828 52 aa3.23□□□□□ -1.89
SCM3YDL139C YJR107C-AP0CT86 78 aa3.22□□□□□ -1.89
SCM3YDL139C GAT4P40569 121 aa3.22□□□□□ -1.89
SCM3YDL139C ATP18P81450 59 aa3.22□□□□□ -1.89
SCM3YDL139C Q0032Q9ZZX7 96 aa3.22□□□□□ -1.89
SCM3YDL139C YFL065CP43539 102 aa3.21□□□□□ -1.9
SCM3YDL139C YHR007C-AQ07074 71 aa3.21□□□□□ -1.9
SCM3YDL139C YPL257WQ08974 193 aa3.21□□□□□ -1.9
SCM3YDL139C YPR203WQ08994 102 aa3.21□□□□□ -1.9
SCM3YDL139C ISD11Q6Q560 94 aa3.21□□□□□ -1.9
SCM3YDL139C PBI2P0CT04 75 aaKnown RBP3.2□□□□□ -1.9
SCM3YDL139C FYV5P25585 152 aa3.2□□□□□ -1.9
SCM3YDL139C ATX1P38636 73 aa3.2□□□□□ -1.9
SCM3YDL139C BSC4P53841 131 aa3.2□□□□□ -1.9
SCM3YDL139C ECM12O13529 151 aa3.19□□□□□ -1.9
SCM3YDL139C YPL080CQ02826 108 aa3.19□□□□□ -1.9
SCM3YDL139C YNL042W-BQ3E7Z2 85 aa3.19□□□□□ -1.9
SCM3YDL139C YBL112CQ3E7Y4 105 aa3.18□□□□□ -1.9
SCM3YDL139C RAD6P06104 172 aa3.17□□□□□ -1.9
SCM3YDL139C DDR48P18899 430 aaKnown RBP3.17□□□□□ -1.9
SCM3YDL139C SKI6P46948 246 aaPredicted RBP3.17□□□□□ -1.9
SCM3YDL139C RSM18P40033 138 aa3.16□□□□□ -1.9
SCM3YDL139C YHR139C-AO13536 103 aa3.15□□□□□ -1.91
SCM3YDL139C YJL197C-AP0C5P0 93 aa3.15□□□□□ -1.91
SCM3YDL139C KRE1P17260 313 aa3.15□□□□□ -1.91
SCM3YDL139C BET1P22804 142 aa3.15□□□□□ -1.91
SCM3YDL139C YBR027CP38220 110 aa3.15□□□□□ -1.91
SCM3YDL139C DDR2P89113 61 aa3.15□□□□□ -1.91
SCM3YDL139C YDR119W-AQ2V2P9 66 aa3.15□□□□□ -1.91
SCM3YDL139C ICS3P47034 131 aa3.14□□□□□ -1.91
SCM3YDL139C RPL38P49167 78 aaKnown RBP3.14□□□□□ -1.91
SCM3YDL139C YNL184CP53876 108 aa3.14□□□□□ -1.91
SCM3YDL139C SHH4Q06236 168 aa3.14□□□□□ -1.91
SCM3YDL139C YIL002W-AQ3E7Z5 69 aa3.14□□□□□ -1.91
SCM3YDL139C YHR213W-BQ8TGK1 99 aa3.13□□□□□ -1.91
SCM3YDL139C SPT4P32914 102 aaPredicted RBP3.12□□□□□ -1.91
SCM3YDL139C YDR246W-AQ3E763 66 aa3.12□□□□□ -1.91
SCM3YDL139C YFL041W-AQ3E817 63 aa3.12□□□□□ -1.91
SCM3YDL139C YAL067W-AQ8TGK6 75 aa3.12□□□□□ -1.91
SCM3YDL139C RPL36BO14455 100 aaKnown RBP3.11□□□□□ -1.91
SCM3YDL139C RPL26AP05743 127 aaKnown RBP3.11□□□□□ -1.91
SCM3YDL139C RPL26BP53221 127 aaKnown RBP3.11□□□□□ -1.91
SCM3YDL139C YOR072WQ08486 104 aa3.11□□□□□ -1.91
SCM3YDL139C EDC2P40023 145 aaPredicted RBP3.1□□□□□ -1.91
SCM3YDL139C MMS2P53152 137 aa3.1□□□□□ -1.91
SCM3YDL139C ECM19Q06011 112 aa3.1□□□□□ -1.91
SCM3YDL139C YJL133C-AQ3E7A3 74 aa3.1□□□□□ -1.91
SCM3YDL139C YHL018WP38744 120 aaPredicted RBP3.09□□□□□ -1.91
SCM3YDL139C YGL041C-BQ3E750 60 aa3.09□□□□□ -1.91
SCM3YDL139C TDA8Q6B2U8 126 aa3.09□□□□□ -1.91
SCM3YDL139C COX23P38824 151 aa3.08□□□□□ -1.92
SCM3YDL139C EMC6Q12431 108 aa3.08□□□□□ -1.92
SCM3YDL139C YLR285C-AQ3E771 56 aa3.08□□□□□ -1.92
SCM3YDL139C MIC10Q96VH5 97 aa3.08□□□□□ -1.92
SCM3YDL139C COF1Q03048 143 aaKnown RBP3.07□□□□□ -1.92
SCM3YDL139C YCR085WP25650 117 aa3.06□□□□□ -1.92
SCM3YDL139C RSM19P53733 91 aaPredicted RBP3.06□□□□□ -1.92
SCM3YDL139C YLR162WQ06235 118 aa3.06□□□□□ -1.92
SCM3YDL139C LCL1Q02786 101 aa3.05□□□□□ -1.92
SCM3YDL139C YGR121W-AQ3E816 71 aa3.05□□□□□ -1.92
SCM3YDL139C YOR268CQ08734 132 aa3.04□□□□□ -1.92
SCM3YDL139C YDL012CQ12489 107 aa3.04□□□□□ -1.92
SCM3YDL139C TSC3Q3E790 80 aa3.04□□□□□ -1.92
SCM3YDL139C YGR039WP53225 103 aa3.02□□□□□ -1.93
SCM3YDL139C ATP20Q12233 115 aa3.02□□□□□ -1.93
SCM3YDL139C NOP10Q6Q547 58 aaPredicted RBP3.02□□□□□ -1.93
SCM3YDL139C TDA2P40045 126 aa3.01□□□□□ -1.93
SCM3YDL139C YAR1P46683 200 aa3.01□□□□□ -1.93
SCM3YDL139C YGL149WP53116 101 aa3.01□□□□□ -1.93
SCM3YDL139C YER039C-AP0CD97 72 aa3□□□□□ -1.93
SCM3YDL139C YSY6P38374 65 aa3□□□□□ -1.93
SCM3YDL139C YHL042WP38729 150 aa3□□□□□ -1.93
SCM3YDL139C SFT1P43682 97 aa3□□□□□ -1.93
SCM3YDL139C SPG1P50088 95 aa3□□□□□ -1.93
SCM3YDL139C YDR010CQ12426 110 aa2.98□□□□□ -1.93
SCM3YDL139C YPL038W-AQ3E7B4 63 aa2.98□□□□□ -1.93
SCM3YDL139C YOL166W-AQ8TGJ1 51 aa2.97□□□□□ -1.93
SCM3YDL139C YAR064WP39563 99 aa2.94□□□□□ -1.94
SCM3YDL139C YER187WP40102 141 aa2.93□□□□□ -1.94
SCM3YDL139C YOL013W-AP0C272 63 aaPredicted RBP2.92□□□□□ -1.94
SCM3YDL139C LIP1Q03579 150 aa2.92□□□□□ -1.94
SCM3YDL139C YCR050CP25630 102 aa2.91□□□□□ -1.94
SCM3YDL139C YIL102CP40488 101 aa2.91□□□□□ -1.94
SCM3YDL139C YJR128WP47162 119 aa2.91□□□□□ -1.94
SCM3YDL139C YPR153WQ06537 140 aa2.91□□□□□ -1.94
SCM3YDL139C AIM4P38305 123 aaPredicted RBP2.9□□□□□ -1.95
SCM3YDL139C YOL097W-AQ3E7Y9 61 aa2.9□□□□□ -1.95
SCM3YDL139C RPL36AP05745 100 aaPredicted RBP2.89□□□□□ -1.95
SCM3YDL139C YJL144WP47009 104 aa2.89□□□□□ -1.95
SCM3YDL139C YLR361C-AQ3E795 98 aa2.89□□□□□ -1.95
SCM3YDL139C YLR157W-DP0CE99 70 aa2.87□□□□□ -1.95
SCM3YDL139C YOR314WQ12506 109 aa2.87□□□□□ -1.95
SCM3YDL139C YHL005CP38752 130 aa2.86□□□□□ -1.95
SCM3YDL139C YOR316C-AQ3E806 69 aa2.86□□□□□ -1.95
SCM3YDL139C RPS30AP0CX33 63 aaKnown RBP2.84□□□□□ -1.95
SCM3YDL139C RPS30BP0CX34 63 aaKnown RBP2.84□□□□□ -1.95
SCM3YDL139C TOM6P33448 61 aa2.84□□□□□ -1.95
SCM3YDL139C YKL183C-AQ3E765 70 aa2.83□□□□□ -1.96
SCM3YDL139C YHR073W-AP0C5N7 58 aa2.82□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms