RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C MPC3P53311 146 aa0.73□□□□□ -2.29
MSH3YCR092C POP3P53833 195 aaPredicted RBP0.73□□□□□ -2.29
MSH3YCR092C YCR050CP25630 102 aa0.73□□□□□ -2.29
MSH3YCR092C COX23P38824 151 aa0.73□□□□□ -2.29
MSH3YCR092C YNL184CP53876 108 aa0.73□□□□□ -2.29
MSH3YCR092C YLR162WQ06235 118 aa0.73□□□□□ -2.29
MSH3YCR092C RPL36BO14455 100 aaKnown RBP0.72□□□□□ -2.29
MSH3YCR092C RAD6P06104 172 aa0.72□□□□□ -2.29
MSH3YCR092C GLC8P41818 229 aa0.72□□□□□ -2.29
MSH3YCR092C YMR103CQ04436 120 aa0.72□□□□□ -2.29
MSH3YCR092C MID2P36027 376 aa0.72□□□□□ -2.29
MSH3YCR092C HPA2Q06592 156 aa0.72□□□□□ -2.29
MSH3YCR092C HUA1P40325 198 aa0.71□□□□□ -2.3
MSH3YCR092C CYT2Q00873 224 aa0.71□□□□□ -2.3
MSH3YCR092C TSC3Q3E790 80 aa0.71□□□□□ -2.3
MSH3YCR092C ATG8P38182 117 aaRIP-Chip data0.71□□□□□ -2.3not detected
MSH3YCR092C DSE2P38844 325 aa0.71□□□□□ -2.3
MSH3YCR092C SNN1P48232 102 aa0.71□□□□□ -2.3
MSH3YCR092C ECM19Q06011 112 aa0.71□□□□□ -2.3
MSH3YCR092C TMA7Q3E764 64 aaKnown RBP0.71□□□□□ -2.3
MSH3YCR092C SMD1Q02260 146 aaPredicted RBP0.7□□□□□ -2.3
MSH3YCR092C YGL010WP25338 174 aa0.7□□□□□ -2.3
MSH3YCR092C MSL1P40567 111 aaPredicted RBP0.7□□□□□ -2.3
MSH3YCR092C YJL009WP47078 108 aa0.7□□□□□ -2.3
MSH3YCR092C EDC1P53080 175 aaPredicted RBP0.7□□□□□ -2.3
MSH3YCR092C FMP16Q12497 93 aa0.7□□□□□ -2.3
MSH3YCR092C ATP15P21306 62 aa0.69□□□□□ -2.3
MSH3YCR092C BET1P22804 142 aa0.69□□□□□ -2.3
MSH3YCR092C MRPL11P36521 249 aaPredicted RBP0.69□□□□□ -2.3
MSH3YCR092C RSM18P40033 138 aa0.69□□□□□ -2.3
MSH3YCR092C VMA21P41806 77 aa0.69□□□□□ -2.3
MSH3YCR092C YOR304C-AO14468 76 aa0.69□□□□□ -2.3
MSH3YCR092C ICS3P47034 131 aa0.69□□□□□ -2.3
MSH3YCR092C YPR153WQ06537 140 aa0.69□□□□□ -2.3
MSH3YCR092C MIC10Q96VH5 97 aa0.69□□□□□ -2.3
MSH3YCR092C ATP18P81450 59 aa0.68□□□□□ -2.3
MSH3YCR092C COF1Q03048 143 aaKnown RBP0.68□□□□□ -2.3
MSH3YCR092C UIP3P39547 235 aa0.68□□□□□ -2.3
MSH3YCR092C RPL37AP49166 88 aaKnown RBP0.68□□□□□ -2.3
MSH3YCR092C JAC1P53193 184 aa0.68□□□□□ -2.3
MSH3YCR092C YPL261CQ08976 102 aa0.68□□□□□ -2.3
MSH3YCR092C YBR209WP38311 105 aa0.68□□□□□ -2.3
MSH3YCR092C YER085CP40058 173 aa0.68□□□□□ -2.3
MSH3YCR092C RPL18AP0CX49 186 aaKnown RBP0.67□□□□□ -2.3
MSH3YCR092C RPL18BP0CX50 186 aaKnown RBP0.67□□□□□ -2.3
MSH3YCR092C LSM6Q06406 86 aaKnown RBP0.67□□□□□ -2.3
MSH3YCR092C YBR090CP38253 122 aa0.67□□□□□ -2.3
MSH3YCR092C YJL133C-AQ3E7A3 74 aa0.67□□□□□ -2.3
MSH3YCR092C YDL085C-AQ3E7B7 68 aaKnown RBP0.67□□□□□ -2.3
MSH3YCR092C YOR316C-AQ3E806 69 aa0.67□□□□□ -2.3
MSH3YCR092C YBL008W-AQ3E821 79 aa0.67□□□□□ -2.3
MSH3YCR092C RPL36AP05745 100 aaPredicted RBP0.66□□□□□ -2.3
MSH3YCR092C YCR085WP25650 117 aa0.66□□□□□ -2.3
MSH3YCR092C YBR027CP38220 110 aa0.66□□□□□ -2.3
MSH3YCR092C MRPL44P19956 98 aa0.66□□□□□ -2.3
MSH3YCR092C YER181CP40097 107 aa0.65□□□□□ -2.31
MSH3YCR092C HUR1P45820 110 aa0.65□□□□□ -2.31
MSH3YCR092C YHR007C-AQ07074 71 aa0.65□□□□□ -2.31
MSH3YCR092C WIP1Q2V2P8 89 aa0.65□□□□□ -2.31
MSH3YCR092C TDA2P40045 126 aa0.65□□□□□ -2.31
MSH3YCR092C YGL088WP53151 121 aa0.65□□□□□ -2.31
MSH3YCR092C YJR107C-AP0CT86 78 aa0.64□□□□□ -2.31
MSH3YCR092C LSM8P47093 109 aaKnown RBP0.64□□□□□ -2.31
MSH3YCR092C YER078W-AQ3E7A2 54 aa0.64□□□□□ -2.31
MSH3YCR092C YHR213W-BQ8TGK1 99 aa0.64□□□□□ -2.31
MSH3YCR092C YFR009W-AP0C5M9 85 aa0.63□□□□□ -2.31
MSH3YCR092C TIM11P81449 96 aaPredicted RBP0.63□□□□□ -2.31
MSH3YCR092C YLR363W-AQ3E747 85 aa0.63□□□□□ -2.31
MSH3YCR092C YHR139C-AO13536 103 aa0.63□□□□□ -2.31
MSH3YCR092C YIL102C-AQ2V2P5 75 aa0.63□□□□□ -2.31
MSH3YCR092C YDR182W-AQ3E796 67 aa0.63□□□□□ -2.31
MSH3YCR092C YGR146C-AQ8TGT9 53 aa0.63□□□□□ -2.31
MSH3YCR092C PAI3P01094 68 aa0.62□□□□□ -2.31
MSH3YCR092C RPL28P02406 149 aaKnown RBP0.62□□□□□ -2.31
MSH3YCR092C YHL042WP38729 150 aa0.62□□□□□ -2.31
MSH3YCR092C ELC1Q03071 99 aa0.62□□□□□ -2.31
MSH3YCR092C YPL080CQ02826 108 aa0.62□□□□□ -2.31
MSH3YCR092C YDR381C-AQ3E6R5 114 aa0.62□□□□□ -2.31
MSH3YCR092C YKL183C-AQ3E765 70 aa0.62□□□□□ -2.31
MSH3YCR092C YAR064WP39563 99 aa0.61□□□□□ -2.31
MSH3YCR092C ATP20Q12233 115 aa0.61□□□□□ -2.31
MSH3YCR092C NAT5Q08689 176 aa0.61□□□□□ -2.31
MSH3YCR092C YFL041W-AQ3E817 63 aa0.6□□□□□ -2.31
MSH3YCR092C YSY6P38374 65 aa0.6□□□□□ -2.31
MSH3YCR092C YER187WP40102 141 aa0.6□□□□□ -2.31
MSH3YCR092C MRX7P53869 86 aa0.6□□□□□ -2.31
MSH3YCR092C SKI6P46948 246 aaPredicted RBP0.58□□□□□ -2.32
MSH3YCR092C COX8P04039 78 aa0.58□□□□□ -2.32
MSH3YCR092C SAE3P89114 91 aa0.58□□□□□ -2.32
MSH3YCR092C RPA12P32529 125 aaKnown RBP0.57□□□□□ -2.32
MSH3YCR092C YOL013W-AP0C272 63 aaPredicted RBP0.56□□□□□ -2.32
MSH3YCR092C SSS1P35179 80 aa0.56□□□□□ -2.32
MSH3YCR092C YPR170W-BP0C5R9 85 aa0.56□□□□□ -2.32
MSH3YCR092C OLI1P61829 76 aa0.56□□□□□ -2.32
MSH3YCR092C INO4P13902 151 aa0.55□□□□□ -2.32
MSH3YCR092C YOR314WQ12506 109 aa0.55□□□□□ -2.32
MSH3YCR092C YIL156W-BQ2V2P4 73 aa0.55□□□□□ -2.32
MSH3YCR092C YER188C-AP0C0V2 99 aa0.54□□□□□ -2.32
MSH3YCR092C EMC6Q12431 108 aa0.54□□□□□ -2.32
MSH3YCR092C YHR125WP38831 101 aa0.54□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms