RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W SPT4P32914 102 aaPredicted RBP4.27□□□□□ -1.73
LDB16YCL005W BET1P22804 142 aa4.26□□□□□ -1.73
LDB16YCL005W ATP18P81450 59 aa4.26□□□□□ -1.73
LDB16YCL005W DDR2P89113 61 aa4.26□□□□□ -1.73
LDB16YCL005W LCL2Q08045 131 aa4.26□□□□□ -1.73
LDB16YCL005W YLR156WP0CE96 114 aa4.25□□□□□ -1.73
LDB16YCL005W YLR159WP0CE97 114 aa4.25□□□□□ -1.73
LDB16YCL005W YLR161WP0CE98 114 aa4.25□□□□□ -1.73
LDB16YCL005W SKI6P46948 246 aaPredicted RBP4.25□□□□□ -1.73
LDB16YCL005W YDR381C-AQ3E6R5 114 aa4.25□□□□□ -1.73
LDB16YCL005W GAT4P40569 121 aa4.23□□□□□ -1.73
LDB16YCL005W YAR1P46683 200 aa4.23□□□□□ -1.73
LDB16YCL005W YFR009W-AP0C5M9 85 aa4.22□□□□□ -1.73
LDB16YCL005W LCL1Q02786 101 aa4.22□□□□□ -1.73
LDB16YCL005W ISD11Q6Q560 94 aa4.22□□□□□ -1.73
LDB16YCL005W KRE1P17260 313 aa4.21□□□□□ -1.74
LDB16YCL005W BSC4P53841 131 aa4.21□□□□□ -1.74
LDB16YCL005W YAL063C-AQ3E791 96 aa4.21□□□□□ -1.74
LDB16YCL005W RPL36BO14455 100 aaKnown RBP4.2□□□□□ -1.74
LDB16YCL005W RSM19P53733 91 aaPredicted RBP4.2□□□□□ -1.74
LDB16YCL005W GIS2P53849 153 aaKnown RBP RIP-Chip data4.2□□□□□ -1.74not detected
LDB16YCL005W YHR007C-AQ07074 71 aa4.2□□□□□ -1.74
LDB16YCL005W YHR139C-AO13536 103 aa4.19□□□□□ -1.74
LDB16YCL005W RAD6P06104 172 aa4.19□□□□□ -1.74
LDB16YCL005W YFL065CP43539 102 aa4.19□□□□□ -1.74
LDB16YCL005W YOR072WQ08486 104 aa4.19□□□□□ -1.74
LDB16YCL005W YPR203WQ08994 102 aa4.19□□□□□ -1.74
LDB16YCL005W EMC6Q12431 108 aa4.18□□□□□ -1.74
LDB16YCL005W YGR121W-AQ3E816 71 aa4.18□□□□□ -1.74
LDB16YCL005W YFL041W-AQ3E817 63 aa4.18□□□□□ -1.74
LDB16YCL005W MMS2P53152 137 aa4.17□□□□□ -1.74
LDB16YCL005W EDC2P40023 145 aaPredicted RBP4.16□□□□□ -1.74
LDB16YCL005W TDA2P40045 126 aa4.16□□□□□ -1.74
LDB16YCL005W ICS3P47034 131 aa4.16□□□□□ -1.74
LDB16YCL005W RPL38P49167 78 aaKnown RBP4.16□□□□□ -1.74
LDB16YCL005W SPG1P50088 95 aa4.16□□□□□ -1.74
LDB16YCL005W EDC1P53080 175 aaPredicted RBP4.16□□□□□ -1.74
LDB16YCL005W SHH4Q06236 168 aa4.15□□□□□ -1.75
LDB16YCL005W YIL002W-AQ3E7Z5 69 aa4.15□□□□□ -1.75
LDB16YCL005W YHR213W-BQ8TGK1 99 aa4.15□□□□□ -1.75
LDB16YCL005W YBL112CQ3E7Y4 105 aa4.14□□□□□ -1.75
LDB16YCL005W TDA8Q6B2U8 126 aa4.14□□□□□ -1.75
LDB16YCL005W YHL042WP38729 150 aa4.13□□□□□ -1.75
LDB16YCL005W COX23P38824 151 aa4.13□□□□□ -1.75
LDB16YCL005W RSM18P40033 138 aa4.13□□□□□ -1.75
LDB16YCL005W YJL133C-AQ3E7A3 74 aa4.13□□□□□ -1.75
LDB16YCL005W YJR085CP47131 105 aaKnown RBP4.12□□□□□ -1.75
LDB16YCL005W YSY6P38374 65 aa4.11□□□□□ -1.75
LDB16YCL005W YLR285C-AQ3E771 56 aa4.11□□□□□ -1.75
LDB16YCL005W YNL184CP53876 108 aa4.1□□□□□ -1.75
LDB16YCL005W ECM19Q06011 112 aa4.1□□□□□ -1.75
LDB16YCL005W ATP20Q12233 115 aa4.1□□□□□ -1.75
LDB16YCL005W YMR230W-AQ3E7B5 62 aa4.1□□□□□ -1.75
LDB16YCL005W YLR162WQ06235 118 aa4.09□□□□□ -1.75
LDB16YCL005W YGL149WP53116 101 aa4.08□□□□□ -1.76
LDB16YCL005W COF1Q03048 143 aaKnown RBP4.08□□□□□ -1.76
LDB16YCL005W YOL014WQ08110 124 aa4.08□□□□□ -1.76
LDB16YCL005W YOR268CQ08734 132 aa4.08□□□□□ -1.76
LDB16YCL005W MIC10Q96VH5 97 aa4.08□□□□□ -1.76
LDB16YCL005W YBR027CP38220 110 aa4.07□□□□□ -1.76
LDB16YCL005W DDR48P18899 430 aaKnown RBP4.06□□□□□ -1.76
LDB16YCL005W YEL045CP32616 141 aa4.06□□□□□ -1.76
LDB16YCL005W YFL067WP43537 175 aa4.06□□□□□ -1.76
LDB16YCL005W YGR039WP53225 103 aa4.06□□□□□ -1.76
LDB16YCL005W YOR304C-AO14468 76 aa4.05□□□□□ -1.76
LDB16YCL005W YJL197C-AP0C5P0 93 aa4.05□□□□□ -1.76
LDB16YCL005W YCR050CP25630 102 aa4.05□□□□□ -1.76
LDB16YCL005W MDN1Q12019 4910 aaKnown RBP4.05□□□□□ -1.76
LDB16YCL005W YLR157W-DP0CE99 70 aa4.04□□□□□ -1.76
LDB16YCL005W YKL183C-AQ3E765 70 aa4.04□□□□□ -1.76
LDB16YCL005W YHL018WP38744 120 aaPredicted RBP4.02□□□□□ -1.77
LDB16YCL005W YDR119W-AQ2V2P9 66 aa4.02□□□□□ -1.77
LDB16YCL005W YOL097W-AQ3E7Y9 61 aa4.02□□□□□ -1.77
LDB16YCL005W YPL038W-AQ3E7B4 63 aa4□□□□□ -1.77
LDB16YCL005W HHF1P02309 103 aaKnown RBP3.99□□□□□ -1.77
LDB16YCL005W YER078W-AQ3E7A2 54 aa3.99□□□□□ -1.77
LDB16YCL005W KTI11Q3E840 82 aa3.99□□□□□ -1.77
LDB16YCL005W YOR314WQ12506 109 aa3.98□□□□□ -1.77
LDB16YCL005W KSH1Q8TGJ3 72 aa3.98□□□□□ -1.77
LDB16YCL005W YAR064WP39563 99 aa3.96□□□□□ -1.78
LDB16YCL005W RPL36AP05745 100 aaPredicted RBP3.94□□□□□ -1.78
LDB16YCL005W YDR010CQ12426 110 aa3.94□□□□□ -1.78
LDB16YCL005W NOP10Q6Q547 58 aaPredicted RBP3.93□□□□□ -1.78
LDB16YCL005W YHL005CP38752 130 aa3.92□□□□□ -1.78
LDB16YCL005W YPL080CQ02826 108 aa3.92□□□□□ -1.78
LDB16YCL005W TOM6P33448 61 aa3.91□□□□□ -1.78
LDB16YCL005W AIM4P38305 123 aaPredicted RBP3.91□□□□□ -1.78
LDB16YCL005W YER187WP40102 141 aa3.91□□□□□ -1.78
LDB16YCL005W YIL102CP40488 101 aa3.91□□□□□ -1.78
LDB16YCL005W YDR246W-AQ3E763 66 aa3.9□□□□□ -1.79
LDB16YCL005W YOL013W-AP0C272 63 aaPredicted RBP3.88□□□□□ -1.79
LDB16YCL005W LIP1Q03579 150 aa3.88□□□□□ -1.79
LDB16YCL005W YPR153WQ06537 140 aa3.88□□□□□ -1.79
LDB16YCL005W YDL012CQ12489 107 aa3.87□□□□□ -1.79
LDB16YCL005W YHR073W-AP0C5N7 58 aa3.86□□□□□ -1.79
LDB16YCL005W COX7P10174 60 aa3.86□□□□□ -1.79
LDB16YCL005W YDR182W-AQ3E796 67 aa3.86□□□□□ -1.79
LDB16YCL005W YLR361C-AQ3E795 98 aa3.85□□□□□ -1.79
LDB16YCL005W YOL166W-AQ8TGJ1 51 aa3.85□□□□□ -1.79
LDB16YCL005W YHR125WP38831 101 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms