RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W YGL193CP53097 103 aa3.77□□□□□ -1.81
SHM1YBR263W YGL034CP53186 121 aa3.77□□□□□ -1.81
SHM1YBR263W RSM19P53733 91 aaPredicted RBP3.77□□□□□ -1.81
SHM1YBR263W YLR296WQ05898 108 aa3.77□□□□□ -1.81
SHM1YBR263W PPT2Q12036 173 aa3.77□□□□□ -1.81
SHM1YBR263W QCR8P08525 94 aa3.76□□□□□ -1.81
SHM1YBR263W YNL190WP53872 204 aa3.75□□□□□ -1.81
SHM1YBR263W YKL023C-AQ2V2P3 75 aa3.75□□□□□ -1.81
SHM1YBR263W AQY2P0CD90 149 aa3.74□□□□□ -1.81
SHM1YBR263W YHL042WP38729 150 aa3.74□□□□□ -1.81
SHM1YBR263W YPL038W-AQ3E7B4 63 aa3.73□□□□□ -1.81
SHM1YBR263W MIC10Q96VH5 97 aa3.73□□□□□ -1.81
SHM1YBR263W MVB12P42939 101 aa3.73□□□□□ -1.81
SHM1YBR263W HPA2Q06592 156 aa3.73□□□□□ -1.81
SHM1YBR263W BET1P22804 142 aa3.72□□□□□ -1.81
SHM1YBR263W EMC6Q12431 108 aa3.72□□□□□ -1.81
SHM1YBR263W YLL006W-AQ3E814 58 aa3.72□□□□□ -1.81
SHM1YBR263W YLR307C-AQ3E825 87 aa3.71□□□□□ -1.82
SHM1YBR263W YBL039W-BP0C268 59 aa3.7□□□□□ -1.82
SHM1YBR263W YFL019CP43576 117 aa3.7□□□□□ -1.82
SHM1YBR263W IGD1P43598 195 aa3.7□□□□□ -1.82
SHM1YBR263W YGL041C-BQ3E750 60 aa3.7□□□□□ -1.82
SHM1YBR263W YOR376W-AQ3E805 51 aa3.7□□□□□ -1.82
SHM1YBR263W SPG1P50088 95 aa3.69□□□□□ -1.82
SHM1YBR263W YDR381C-AQ3E6R5 114 aa3.69□□□□□ -1.82
SHM1YBR263W LCL1Q02786 101 aa3.68□□□□□ -1.82
SHM1YBR263W RPL29P05747 59 aaPredicted RBP3.67□□□□□ -1.82
SHM1YBR263W AIM19P40502 157 aa3.67□□□□□ -1.82
SHM1YBR263W YML100W-AQ8TGT0 57 aa3.67□□□□□ -1.82
SHM1YBR263W Q0032Q9ZZX7 96 aa3.67□□□□□ -1.82
SHM1YBR263W SKI6P46948 246 aaPredicted RBP3.67□□□□□ -1.82
SHM1YBR263W RGM1Q00453 211 aa3.67□□□□□ -1.82
SHM1YBR263W YHR139C-AO13536 103 aa3.66□□□□□ -1.82
SHM1YBR263W LSM6Q06406 86 aaKnown RBP3.66□□□□□ -1.82
SHM1YBR263W YER175W-AQ8TGU4 54 aa3.66□□□□□ -1.82
SHM1YBR263W HUR1P45820 110 aa3.65□□□□□ -1.83
SHM1YBR263W YOR020W-AQ3E824 90 aa3.65□□□□□ -1.83
SHM1YBR263W YEL045CP32616 141 aa3.63□□□□□ -1.83
SHM1YBR263W RSM18P40033 138 aa3.63□□□□□ -1.83
SHM1YBR263W TDA2P40045 126 aa3.63□□□□□ -1.83
SHM1YBR263W ICY1Q04329 127 aa3.63□□□□□ -1.83
SHM1YBR263W IRC21Q04772 201 aa3.63□□□□□ -1.83
SHM1YBR263W TDA8Q6B2U8 126 aa3.63□□□□□ -1.83
SHM1YBR263W YER187WP40102 141 aa3.62□□□□□ -1.83
SHM1YBR263W DDR48P18899 430 aaKnown RBP3.61□□□□□ -1.83
SHM1YBR263W ICS3P47034 131 aa3.61□□□□□ -1.83
SHM1YBR263W YFR032C-BQ8TGU2 87 aa3.61□□□□□ -1.83
SHM1YBR263W YHL005CP38752 130 aa3.6□□□□□ -1.83
SHM1YBR263W YOR034C-AQ3E735 80 aa3.6□□□□□ -1.83
SHM1YBR263W HHF1P02309 103 aaKnown RBP3.6□□□□□ -1.83
SHM1YBR263W YFL067WP43537 175 aa3.6□□□□□ -1.83
SHM1YBR263W YOL014WQ08110 124 aa3.6□□□□□ -1.83
SHM1YBR263W YOR268CQ08734 132 aa3.6□□□□□ -1.83
SHM1YBR263W RPL26AP05743 127 aaKnown RBP3.59□□□□□ -1.84
SHM1YBR263W RPL26BP53221 127 aaKnown RBP3.59□□□□□ -1.84
SHM1YBR263W YBR230W-AQ3E762 66 aa3.59□□□□□ -1.84
SHM1YBR263W YSY6P38374 65 aa3.58□□□□□ -1.84
SHM1YBR263W YNL042W-BQ3E7Z2 85 aa3.58□□□□□ -1.84
SHM1YBR263W YCR043CP25361 127 aa3.57□□□□□ -1.84
SHM1YBR263W YJL127C-BQ3E828 52 aa3.57□□□□□ -1.84
SHM1YBR263W YLR156WP0CE96 114 aa3.56□□□□□ -1.84
SHM1YBR263W YLR159WP0CE97 114 aa3.56□□□□□ -1.84
SHM1YBR263W YLR161WP0CE98 114 aa3.56□□□□□ -1.84
SHM1YBR263W FYV5P25585 152 aa3.56□□□□□ -1.84
SHM1YBR263W EDC2P40023 145 aaPredicted RBP3.56□□□□□ -1.84
SHM1YBR263W DDR2P89113 61 aa3.56□□□□□ -1.84
SHM1YBR263W YBL008W-AQ3E821 79 aa3.56□□□□□ -1.84
SHM1YBR263W YLR236CA0A023PZG4 107 aa3.55□□□□□ -1.84
SHM1YBR263W MSA2P36157 363 aa3.54□□□□□ -1.84
SHM1YBR263W YOR314WQ12506 109 aa3.54□□□□□ -1.84
SHM1YBR263W YDR246W-AQ3E763 66 aa3.54□□□□□ -1.84
SHM1YBR263W FYV12Q08559 129 aa3.54□□□□□ -1.84
SHM1YBR263W QCR10P37299 77 aa3.53□□□□□ -1.84
SHM1YBR263W YGL149WP53116 101 aa3.53□□□□□ -1.84
SHM1YBR263W MPC3P53311 146 aa3.53□□□□□ -1.84
SHM1YBR263W YGR121W-AQ3E816 71 aa3.53□□□□□ -1.84
SHM1YBR263W BSC4P53841 131 aa3.52□□□□□ -1.85
SHM1YBR263W YDR010CQ12426 110 aa3.52□□□□□ -1.85
SHM1YBR263W YOR381W-AQ3E804 55 aa3.52□□□□□ -1.85
SHM1YBR263W DSE2P38844 325 aa3.51□□□□□ -1.85
SHM1YBR263W YLR162WQ06235 118 aa3.51□□□□□ -1.85
SHM1YBR263W YHR007C-AQ07074 71 aa3.51□□□□□ -1.85
SHM1YBR263W YKL065W-AQ2V2P2 73 aa3.51□□□□□ -1.85
SHM1YBR263W AIM4P38305 123 aaPredicted RBP3.5□□□□□ -1.85
SHM1YBR263W YJR085CP47131 105 aaKnown RBP3.5□□□□□ -1.85
SHM1YBR263W LIP1Q03579 150 aa3.5□□□□□ -1.85
SHM1YBR263W SOM1Q05676 74 aa3.48□□□□□ -1.85
SHM1YBR263W YOR072WQ08486 104 aa3.48□□□□□ -1.85
SHM1YBR263W YMR230W-AQ3E7B5 62 aa3.48□□□□□ -1.85
SHM1YBR263W YER188C-AP0C0V2 99 aa3.47□□□□□ -1.85
SHM1YBR263W RPL36BO14455 100 aaKnown RBP3.47□□□□□ -1.85
SHM1YBR263W OST5Q92316 86 aa3.47□□□□□ -1.85
SHM1YBR263W YJR107C-AP0CT86 78 aa3.46□□□□□ -1.86
SHM1YBR263W ATP20Q12233 115 aa3.46□□□□□ -1.86
SHM1YBR263W YBR027CP38220 110 aa3.45□□□□□ -1.86
SHM1YBR263W YMR122CQ03879 124 aa3.44□□□□□ -1.86
SHM1YBR263W ATP18P81450 59 aa3.42□□□□□ -1.86
SHM1YBR263W YDR182W-AQ3E796 67 aa3.42□□□□□ -1.86
SHM1YBR263W YFR009W-AP0C5M9 85 aa3.41□□□□□ -1.86
SHM1YBR263W RPL36AP05745 100 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms