RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeastyeast

Gene SLX1, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX1YBR228W MMS2P53152 137 aa2.66□□□□□ -1.98
SLX1YBR228W COF1Q03048 143 aaKnown RBP2.66□□□□□ -1.98
SLX1YBR228W LSM6Q06406 86 aaKnown RBP2.66□□□□□ -1.98
SLX1YBR228W UBC4P15731 148 aa2.65□□□□□ -1.99
SLX1YBR228W COX10P21592 462 aa2.65□□□□□ -1.99
SLX1YBR228W NHP2P32495 156 aaPredicted RBP2.65□□□□□ -1.99
SLX1YBR228W ATX1P38636 73 aa2.65□□□□□ -1.99
SLX1YBR228W YGR039WP53225 103 aa2.65□□□□□ -1.99
SLX1YBR228W IRC21Q04772 201 aa2.65□□□□□ -1.99
SLX1YBR228W YIL102C-AQ2V2P5 75 aa2.65□□□□□ -1.99
SLX1YBR228W YLR307C-AQ3E825 87 aa2.65□□□□□ -1.99
SLX1YBR228W ICY1Q04329 127 aa2.64□□□□□ -1.99
SLX1YBR228W ECM19Q06011 112 aa2.64□□□□□ -1.99
SLX1YBR228W YOR034C-AQ3E735 80 aa2.64□□□□□ -1.99
SLX1YBR228W YGL193CP53097 103 aa2.63□□□□□ -1.99
SLX1YBR228W KTI11Q3E840 82 aa2.63□□□□□ -1.99
SLX1YBR228W RPL26AP05743 127 aaKnown RBP2.62□□□□□ -1.99
SLX1YBR228W PBI2P0CT04 75 aaKnown RBP2.62□□□□□ -1.99
SLX1YBR228W HUR1P45820 110 aa2.62□□□□□ -1.99
SLX1YBR228W RPL26BP53221 127 aaKnown RBP2.62□□□□□ -1.99
SLX1YBR228W LCL1Q02786 101 aa2.62□□□□□ -1.99
SLX1YBR228W YLR236CA0A023PZG4 107 aa2.61□□□□□ -1.99
SLX1YBR228W SFT1P43682 97 aa2.61□□□□□ -1.99
SLX1YBR228W OST2P46964 130 aa2.61□□□□□ -1.99
SLX1YBR228W YBR230W-AQ3E762 66 aa2.61□□□□□ -1.99
SLX1YBR228W FYV5P25585 152 aa2.6□□□□□ -1.99
SLX1YBR228W MSA2P36157 363 aa2.6□□□□□ -1.99
SLX1YBR228W YLR412C-AQ3E742 68 aa2.6□□□□□ -1.99
SLX1YBR228W YNL042W-BQ3E7Z2 85 aa2.6□□□□□ -1.99
SLX1YBR228W YJL127C-BQ3E828 52 aa2.6□□□□□ -1.99
SLX1YBR228W KRE1P17260 313 aa2.59□□□□□ -1.99
SLX1YBR228W MPC3P53311 146 aa2.59□□□□□ -1.99
SLX1YBR228W YNL277W-AQ3E7Z0 62 aa2.59□□□□□ -1.99
SLX1YBR228W YLR156WP0CE96 114 aa2.58□□□□□ -2
SLX1YBR228W YLR159WP0CE97 114 aa2.58□□□□□ -2
SLX1YBR228W YLR161WP0CE98 114 aa2.58□□□□□ -2
SLX1YBR228W YCR085WP25650 117 aa2.58□□□□□ -2
SLX1YBR228W SPT4P32914 102 aaPredicted RBP2.58□□□□□ -2
SLX1YBR228W DDR2P89113 61 aa2.58□□□□□ -2
SLX1YBR228W YCR050CP25630 102 aa2.57□□□□□ -2
SLX1YBR228W DSE2P38844 325 aa2.57□□□□□ -2
SLX1YBR228W EDC2P40023 145 aaPredicted RBP2.56□□□□□ -2
SLX1YBR228W BSC4P53841 131 aa2.56□□□□□ -2
SLX1YBR228W YJR107C-AP0CT86 78 aa2.55□□□□□ -2
SLX1YBR228W DDR48P18899 430 aaKnown RBP2.55□□□□□ -2
SLX1YBR228W BET1P22804 142 aa2.55□□□□□ -2
SLX1YBR228W RPA12P32529 125 aaKnown RBP2.55□□□□□ -2
SLX1YBR228W YGR164WP53291 111 aa2.55□□□□□ -2
SLX1YBR228W YDR119W-AQ2V2P9 66 aa2.55□□□□□ -2
SLX1YBR228W YFL041W-AQ3E817 63 aa2.55□□□□□ -2
SLX1YBR228W KSH1Q8TGJ3 72 aa2.55□□□□□ -2
SLX1YBR228W SPG1P50088 95 aa2.54□□□□□ -2
SLX1YBR228W YHR007C-AQ07074 71 aa2.54□□□□□ -2
SLX1YBR228W YOR072WQ08486 104 aa2.54□□□□□ -2
SLX1YBR228W YAL063C-AQ3E791 96 aa2.54□□□□□ -2
SLX1YBR228W YGR121W-AQ3E816 71 aa2.54□□□□□ -2
SLX1YBR228W RPL36BO14455 100 aaKnown RBP2.53□□□□□ -2
SLX1YBR228W YHL018WP38744 120 aaPredicted RBP2.53□□□□□ -2
SLX1YBR228W YJL144WP47009 104 aa2.53□□□□□ -2
SLX1YBR228W ATP18P81450 59 aa2.53□□□□□ -2
SLX1YBR228W SHH4Q06236 168 aa2.53□□□□□ -2
SLX1YBR228W YFR009W-AP0C5M9 85 aa2.52□□□□□ -2.01
SLX1YBR228W TOM6P33448 61 aa2.52□□□□□ -2.01
SLX1YBR228W YGL149WP53116 101 aa2.52□□□□□ -2.01
SLX1YBR228W YOR268CQ08734 132 aa2.52□□□□□ -2.01
SLX1YBR228W TSC3Q3E790 80 aa2.52□□□□□ -2.01
SLX1YBR228W YHR139C-AO13536 103 aa2.51□□□□□ -2.01
SLX1YBR228W YHL042WP38729 150 aa2.51□□□□□ -2.01
SLX1YBR228W EMC6Q12431 108 aa2.5□□□□□ -2.01
SLX1YBR228W YBR027CP38220 110 aa2.49□□□□□ -2.01
SLX1YBR228W RSM18P40033 138 aa2.49□□□□□ -2.01
SLX1YBR228W YDR381C-AQ3E6R5 114 aa2.49□□□□□ -2.01
SLX1YBR228W YPL038W-AQ3E7B4 63 aa2.49□□□□□ -2.01
SLX1YBR228W TDA8Q6B2U8 126 aa2.49□□□□□ -2.01
SLX1YBR228W SKI6P46948 246 aaPredicted RBP2.48□□□□□ -2.01
SLX1YBR228W YDR010CQ12426 110 aa2.48□□□□□ -2.01
SLX1YBR228W YOR376W-AQ3E805 51 aa2.48□□□□□ -2.01
SLX1YBR228W YHR213W-BQ8TGK1 99 aa2.48□□□□□ -2.01
SLX1YBR228W MIC10Q96VH5 97 aa2.48□□□□□ -2.01
SLX1YBR228W ICS3P47034 131 aa2.47□□□□□ -2.01
SLX1YBR228W EDC1P53080 175 aaPredicted RBP2.47□□□□□ -2.01
SLX1YBR228W RSM19P53733 91 aaPredicted RBP2.47□□□□□ -2.01
SLX1YBR228W YJL197C-AP0C5P0 93 aa2.46□□□□□ -2.02
SLX1YBR228W YJL133C-AQ3E7A3 74 aa2.46□□□□□ -2.02
SLX1YBR228W COX23P38824 151 aa2.45□□□□□ -2.02
SLX1YBR228W TDA2P40045 126 aa2.45□□□□□ -2.02
SLX1YBR228W RPL38P49167 78 aaKnown RBP2.45□□□□□ -2.02
SLX1YBR228W YLR162WQ06235 118 aa2.45□□□□□ -2.02
SLX1YBR228W YGL034CP53186 121 aa2.44□□□□□ -2.02
SLX1YBR228W YOL014WQ08110 124 aa2.44□□□□□ -2.02
SLX1YBR228W YSY6P38374 65 aa2.43□□□□□ -2.02
SLX1YBR228W YER187WP40102 141 aa2.43□□□□□ -2.02
SLX1YBR228W YLR157W-DP0CE99 70 aa2.42□□□□□ -2.02
SLX1YBR228W YOL097W-AQ3E7Y9 61 aa2.42□□□□□ -2.02
SLX1YBR228W YML100W-AQ8TGT0 57 aa2.41□□□□□ -2.02
SLX1YBR228W ATP20Q12233 115 aa2.4□□□□□ -2.03
SLX1YBR228W YOR381W-AQ3E804 55 aa2.4□□□□□ -2.03
SLX1YBR228W AIM4P38305 123 aaPredicted RBP2.39□□□□□ -2.03
SLX1YBR228W YHL005CP38752 130 aa2.39□□□□□ -2.03
SLX1YBR228W YLR285C-AQ3E771 56 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms