RNA–Protein interactions for RNA: YBR204C

LDH1, Transcript of Serine hydrolase, yeastyeast

Gene LDH1, Length 1,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDH1YBR204C PAU20Q08322 120 aa0.19□□□□□ -2.38
LDH1YBR204C YBR292CP38357 123 aa0.18□□□□□ -2.38
LDH1YBR204C YNL198CP40166 100 aa0.18□□□□□ -2.38
LDH1YBR204C YNR034W-AQ3E841 98 aa0.18□□□□□ -2.38
LDH1YBR204C ATX1P38636 73 aa0.17□□□□□ -2.38
LDH1YBR204C RPS29AP41057 56 aaKnown RBP0.17□□□□□ -2.38
LDH1YBR204C YGR035W-AQ45U48 73 aa0.17□□□□□ -2.38
LDH1YBR204C BPH1P25356 2167 aa0.16□□□□□ -2.38
LDH1YBR204C RPC10P40422 70 aa0.16□□□□□ -2.38
LDH1YBR204C UBC5P15732 148 aa0.15□□□□□ -2.39
LDH1YBR204C ROX3P25046 220 aa0.15□□□□□ -2.39
LDH1YBR204C RSM18P40033 138 aa0.15□□□□□ -2.39
LDH1YBR204C RPS12P48589 143 aaKnown RBP0.15□□□□□ -2.39
LDH1YBR204C YBL071CP38185 102 aa0.14□□□□□ -2.39
LDH1YBR204C YER137CP40083 148 aaKnown RBP0.13□□□□□ -2.39
LDH1YBR204C RSM19P53733 91 aaPredicted RBP0.13□□□□□ -2.39
LDH1YBR204C MIX14Q04341 121 aa0.11□□□□□ -2.39
LDH1YBR204C YBR090CP38253 122 aa0.1□□□□□ -2.39
LDH1YBR204C AIM19P40502 157 aa0.1□□□□□ -2.39
LDH1YBR204C YFR009W-AP0C5M9 85 aa0.09□□□□□ -2.4
LDH1YBR204C PAU1P0CE88 120 aa0.09□□□□□ -2.4
LDH1YBR204C PAU14P0CE89 120 aa0.09□□□□□ -2.4
LDH1YBR204C PAU8P0CE92 120 aa0.09□□□□□ -2.4
LDH1YBR204C PAU11P0CE93 120 aa0.09□□□□□ -2.4
LDH1YBR204C PAU13P38725 120 aa0.09□□□□□ -2.4
LDH1YBR204C PAU10Q03050 120 aa0.09□□□□□ -2.4
LDH1YBR204C PAU9Q3E770 120 aa0.09□□□□□ -2.4
LDH1YBR204C YBR016WP38216 128 aa0.07□□□□□ -2.4
LDH1YBR204C YJR107C-AP0CT86 78 aa0.05□□□□□ -2.4
LDH1YBR204C RPS27AP35997 82 aaKnown RBP0.04□□□□□ -2.4
LDH1YBR204C RPS27BP38711 82 aa0.04□□□□□ -2.4
LDH1YBR204C YHL005CP38752 130 aa0.04□□□□□ -2.4
LDH1YBR204C YOR289WQ12012 251 aaPredicted RBP0.04□□□□□ -2.4
LDH1YBR204C KSH1Q8TGJ3 72 aa0.04□□□□□ -2.4
LDH1YBR204C YOR032W-AQ8TGS1 66 aa0.04□□□□□ -2.4
LDH1YBR204C SPC1P46965 94 aa0.03□□□□□ -2.4
LDH1YBR204C PAU4P53427 120 aa0.03□□□□□ -2.4
LDH1YBR204C NHP10Q03435 203 aa0.03□□□□□ -2.4
LDH1YBR204C RPL38P49167 78 aaKnown RBP0.02□□□□□ -2.41
LDH1YBR204C HMRA1P0CY11 126 aa0.01□□□□□ -2.41
LDH1YBR204C RGI1P40043 161 aaPredicted RBP0.01□□□□□ -2.41
LDH1YBR204C EMC5P40540 141 aa0.01□□□□□ -2.41
LDH1YBR204C YFR010W-AP0C5N0 62 aa0□□□□□ -2.41
LDH1YBR204C SGF11Q03067 99 aa0□□□□□ -2.41
LDH1YBR204C YIL134C-AQ45U18 67 aa-0.01□□□□□ -2.41
LDH1YBR204C YNL042W-BQ3E7Z2 85 aa-0.04□□□□□ -2.42
LDH1YBR204C Q0032Q9ZZX7 96 aa-0.04□□□□□ -2.42
LDH1YBR204C COX7P10174 60 aa-0.05□□□□□ -2.42
LDH1YBR204C PDX3P38075 228 aaKnown RBP-0.05□□□□□ -2.42
LDH1YBR204C RRT15Q3E811 62 aa-0.05□□□□□ -2.42
LDH1YBR204C YHR214C-DP0CX93 97 aa-0.07□□□□□ -2.42
LDH1YBR204C SIP18P50263 79 aa-0.07□□□□□ -2.42
LDH1YBR204C HOR7Q05827 59 aa-0.09□□□□□ -2.42
LDH1YBR204C RPL39P04650 51 aa-0.1□□□□□ -2.43
LDH1YBR204C SNU13P39990 126 aaKnown RBP-0.1□□□□□ -2.43
LDH1YBR204C YOR343CQ12484 108 aa-0.1□□□□□ -2.43
LDH1YBR204C YBR201C-AQ2V2Q3 67 aa-0.1□□□□□ -2.43
LDH1YBR204C YDR034C-AP0C289 58 aa-0.13□□□□□ -2.43
LDH1YBR204C FYV7Q12247 151 aa-0.13□□□□□ -2.43
LDH1YBR204C MSL1P40567 111 aaPredicted RBP-0.15□□□□□ -2.43
LDH1YBR204C BSC4P53841 131 aa-0.15□□□□□ -2.43
LDH1YBR204C YMR105W-AQ8TGS8 64 aa-0.15□□□□□ -2.43
LDH1YBR204C YLL066W-BQ8TGJ7 56 aa-0.16□□□□□ -2.44
LDH1YBR204C TOM6P33448 61 aa-0.17□□□□□ -2.44
LDH1YBR204C NCE101Q02820 53 aa-0.17□□□□□ -2.44
LDH1YBR204C TOM7P53507 60 aa-0.19□□□□□ -2.44
LDH1YBR204C SUS1Q6WNK7 96 aa-0.21□□□□□ -2.44
LDH1YBR204C YDR029WQ12111 104 aa-0.22□□□□□ -2.44
LDH1YBR204C MHF2Q3E829 80 aa-0.22□□□□□ -2.44
LDH1YBR204C YMR122W-AQ3E842 84 aa-0.22□□□□□ -2.44
LDH1YBR204C YDR042CQ03205 200 aa-0.24□□□□□ -2.45
LDH1YBR204C YDR381C-AQ3E6R5 114 aa-0.24□□□□□ -2.45
LDH1YBR204C SDH6Q3E785 79 aa-0.24□□□□□ -2.45
LDH1YBR204C YAL065CO13511 128 aa-0.25□□□□□ -2.45
LDH1YBR204C NHP2P32495 156 aaPredicted RBP-0.25□□□□□ -2.45
LDH1YBR204C Q0017Q9ZZX8 53 aa-0.25□□□□□ -2.45
LDH1YBR204C ATP18P81450 59 aa-0.26□□□□□ -2.45
LDH1YBR204C YCR108CQ3E819 63 aa-0.26□□□□□ -2.45
LDH1YBR204C ZEO1Q08245 113 aa-0.28□□□□□ -2.45
LDH1YBR204C YOR011W-AQ3E807 68 aa-0.29□□□□□ -2.46
LDH1YBR204C FPR2P32472 135 aa-0.3□□□□□ -2.46
LDH1YBR204C YGR025WP53216 100 aa-0.3□□□□□ -2.46
LDH1YBR204C YCR075W-AQ3E830 75 aa-0.3□□□□□ -2.46
LDH1YBR204C TIM12P32830 109 aa-0.32□□□□□ -2.46
LDH1YBR204C YMR082CQ04276 118 aa-0.32□□□□□ -2.46
LDH1YBR204C PAU23Q07987 124 aa-0.33□□□□□ -2.46
LDH1YBR204C PAU17Q12370 124 aa-0.33□□□□□ -2.46
LDH1YBR204C ECM12O13529 151 aa-0.35□□□□□ -2.47
LDH1YBR204C SCP1Q08873 200 aa-0.35□□□□□ -2.47
LDH1YBR204C YPR010C-AA5Z2X5 72 aa-0.37□□□□□ -2.47
LDH1YBR204C YHR073W-AP0C5N7 58 aa-0.38□□□□□ -2.47
LDH1YBR204C YCR085WP25650 117 aa-0.38□□□□□ -2.47
LDH1YBR204C YPL225WQ08971 146 aaKnown RBP-0.38□□□□□ -2.47
LDH1YBR204C YOR192C-CQ3E736 78 aa-0.38□□□□□ -2.47
LDH1YBR204C EDC1P53080 175 aaPredicted RBP-0.39□□□□□ -2.47
LDH1YBR204C ERI1P62651 68 aaKnown RBP-0.39□□□□□ -2.47
LDH1YBR204C YPR108W-AQ3E7B3 70 aa-0.39□□□□□ -2.47
LDH1YBR204C YDR246W-AQ3E763 66 aa-0.41□□□□□ -2.48
LDH1YBR204C YGR121W-AQ3E816 71 aa-0.41□□□□□ -2.48
LDH1YBR204C YCL001W-BQ96VH2 84 aa-0.41□□□□□ -2.48
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms