RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.28□□□□□ -0.92
PHGDH-219ENST00000641513 FAM43BQ6ZT52 329 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-219ENST00000641513 CROCCP2Q86T23 111 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 TMEM110Q86TL2 294 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 FAM35AQ86V20 835 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 PIGZQ86VD9 579 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 CEP57Q86XR8 500 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 SPATS2Q86XZ4 545 aaKnown RBP9.28□□□□□ -0.92
PHGDH-219ENST00000641513 SLC13A5Q86YT5 568 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-219ENST00000641513 ZDHHC17Q8IUH5 632 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 KATNAL2Q8IYT4 538 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 SIX6OS1Q8N1H7 587 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 ARFGAP2Q8N6H7 521 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 SPATA18Q8TC71 538 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 CLEC4CQ8WTT0 213 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 CASKIN2Q8WXE0 1202 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 RNF25Q96BH1 459 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-219ENST00000641513 FAM149B1Q96BN6 582 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 ACSF2Q96CM8 615 aaPredicted RBP9.28□□□□□ -0.92
PHGDH-219ENST00000641513 SMARCD1Q96GM5 515 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 PCED1BQ96HM7 432 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 HSFY1Q96LI6 401 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 ACBD6Q9BR61 282 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 DDX47Q9H0S4 455 aaKnown RBP9.28□□□□□ -0.92
PHGDH-219ENST00000641513 RAB17Q9H0T7 212 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 EPB41L5Q9HCM4 733 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 CYLDQ9NQC7 956 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 DDX56Q9NY93 547 aaKnown RBP9.28□□□□□ -0.92
PHGDH-219ENST00000641513 PCSK1NQ9UHG2 260 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 TBX21Q9UL17 535 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 GREB1Q4ZG55 1949 aa9.28□□□□□ -0.92
PHGDH-219ENST00000641513 KIAA0100Q14667 2235 aaKnown RBP9.28□□□□□ -0.92
PHGDH-219ENST00000641513 LRRD1A4D1F6 860 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 NT5C1B-RDH14C9J2C7 533 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 TMEM189-UBE2V1I3L0A0 370 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 PAPSS1O43252 624 aaPredicted RBP9.27□□□□□ -0.93
PHGDH-219ENST00000641513 SART1O43290 800 aaKnown RBP9.27□□□□□ -0.93
PHGDH-219ENST00000641513 BEST1O76090 585 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 KRT7P08729 469 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 TCF4P15884 667 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 BDNFP23560 247 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 SDC4P31431 198 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 RFC2P35250 354 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 SLC11A1P49279 550 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 CARSP49589 748 aaKnown RBP9.27□□□□□ -0.93
PHGDH-219ENST00000641513 ZNF143P52747 638 aaPredicted RBP9.27□□□□□ -0.93
PHGDH-219ENST00000641513 ATP11AP98196 1134 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 SLC20A2Q08357 652 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 TAF5Q15542 800 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 MAPRE1Q15691 268 aaKnown RBP9.27□□□□□ -0.93
PHGDH-219ENST00000641513 C15orf59Q2T9L4 293 aaPredicted RBP9.27□□□□□ -0.93
PHGDH-219ENST00000641513 SMTNL2Q2TAL5 461 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 ATP13A4Q4VNC1 1196 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 EFHC1Q5JVL4 640 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 FAM171A1Q5VUB5 890 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 KAZNQ674X7 775 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 FAM117BQ6P1L5 589 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 SCYL2Q6P3W7 929 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 OLFML1Q6UWY5 402 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 CLEC20AQ6ZU45 233 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 PAQR9Q6ZVX9 377 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 SPATA2LQ8IUW3 424 aaPredicted RBP9.27□□□□□ -0.93
PHGDH-219ENST00000641513 GSPT2Q8IYD1 628 aaKnown RBP9.27□□□□□ -0.93
PHGDH-219ENST00000641513 RCOR2Q8IZ40 523 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 LRRC43Q8N309 656 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 NIPA2Q8N8Q9 360 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 EXD1Q8NHP7 514 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 FNIP1Q8TF40 1166 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 MAIP1Q8WWC4 291 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 HSPH1Q92598 858 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 MAGOHBQ96A72 148 aaKnown RBP9.27□□□□□ -0.93
PHGDH-219ENST00000641513 RBM41Q96IZ5 413 aaKnown RBP9.27□□□□□ -0.93
PHGDH-219ENST00000641513 PIWIL1Q96J94 861 aaKnown RBP9.27□□□□□ -0.93
PHGDH-219ENST00000641513 CFAP57Q96MR6 1250 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 ZIM3Q96PE6 472 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 TMEM209Q96SK2 561 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 RTP3Q9BQQ7 232 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 CNPY3Q9BT09 278 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 HEMGNQ9BXL5 484 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 RHOBTB2Q9BYZ6 727 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 NGRNQ9NPE2 291 aaKnown RBP9.27□□□□□ -0.93
PHGDH-219ENST00000641513 HCSTQ9UBK5 93 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 GGA2Q9UJY4 613 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 ADAM28Q9UKQ2 775 aa9.27□□□□□ -0.93
PHGDH-219ENST00000641513 TCRBV7S2A1N4TA0A589 114 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 C2CD4BA6NLJ0 364 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 EIF3HO15372 352 aaKnown RBP eCLIP9.26□□□□□ -0.93
PHGDH-219ENST00000641513 PRPSAP2O60256 369 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 PHF2O75151 1096 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 LRCH4O75427 683 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 GABBR2O75899 941 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 TIMP1P01033 207 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 AMHP03971 560 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 OR4Q2P0C623 313 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 RALAP11233 206 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 ECHS1P30084 290 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 MIPP30301 263 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 FLT3P36888 993 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 PBX3P40426 434 aa9.26□□□□□ -0.93
PHGDH-219ENST00000641513 TKTL1P51854 596 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms