RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 NR1H2P55055 460 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 TAF12Q16514 161 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 TRMT5Q32P41 509 aaKnown RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 RARS2Q5T160 578 aaKnown RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 SWSAP1Q6NVH7 229 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 CASC4Q6P4E1 433 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 GJB7Q6PEY0 223 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 FASTKD5Q7L8L6 764 aaKnown RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 KCTD6Q8NC69 237 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 PPP4R1Q8TF05 950 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 CKAP2Q8WWK9 683 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 VMP1Q96GC9 406 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 SERPINB12Q96P63 405 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 TTYH3Q9C0H2 523 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 THAP2Q9H0W7 228 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 EBF3Q9H4W6 596 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 RETREG1Q9H6L5 497 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 KCNQ5Q9NR82 932 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 ZNF70Q9UC06 446 aaPredicted RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 VPS51Q9UID3 782 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 CNOT7Q9UIV1 285 aaKnown RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 PHRF1Q9P1Y6 1649 aaKnown RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 FAM47DPA6NHR8 397 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 CFAP99D6REC4 459 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 FKBP6O75344 327 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 USP1O94782 785 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 SRGAP2CP0DJJ0 459 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 SRGAP2BP0DMP2 458 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 SNHG28P0DPA3 235 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 CCDC130P13994 396 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 UQCRBP14927 111 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 JAK1P23458 1154 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 PSMA2P25787 234 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 KRT6CP48668 564 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 ENTPD1P49961 510 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 CSE1LP55060 971 aaKnown RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 PSMC6P62333 389 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 OTUD4Q01804 1114 aaKnown RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 MAPK6Q16659 721 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 ARL13BQ3SXY8 428 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 ZNF667Q5HYK9 610 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 DEPDC1Q5TB30 811 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 IZUMO3Q5VZ72 239 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 CCDC81Q6ZN84 652 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 GPR141Q7Z602 305 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 LRRC49Q8IUZ0 686 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 ANKMY2Q8IV38 441 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 VPS37AQ8NEZ2 397 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 FBXO25Q8TCJ0 367 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 TMC2Q8TDI7 906 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 GDPD5Q8WTR4 605 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 CFAP36Q96G28 342 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 OTUD5Q96G74 571 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 POLR3FQ9H1D9 316 aaPredicted RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 C2orf40Q9H1Z8 148 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 CYP4F11Q9HBI6 524 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 RBAKQ9NYW8 714 aaPredicted RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 SMG5Q9UPR3 1016 aaKnown RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 C15orf38-AP3S2A0A0A6YYH1 394 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 CCDC162PA2VCL2 907 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 FUOMA2VDF0 154 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 NPM3O75607 178 aaKnown RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 SEC24DO94855 1032 aaPredicted RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 GJB6O95452 261 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 PRLP01236 227 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 ICAM1P05362 532 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 FAM58BPP0C7Q3 252 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 MZF1P28698 734 aaPredicted RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 PTGS2P35354 604 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 SLC5A3P53794 718 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 OVGP1Q12889 678 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 KCTD2Q14681 263 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 SUZ12Q15022 739 aaKnown RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 TKFCQ3LXA3 575 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 BBS9Q3SYG4 887 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 NADK2Q4G0N4 442 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 TWF2Q6IBS0 349 aaKnown RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 ACAD10Q6JQN1 1059 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 ARPINQ7Z6K5 226 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 NT5DC3Q86UY8 548 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 BRSK2Q8IWQ3 736 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 PLEKHO2Q8TD55 490 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 EME1Q96AY2 570 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 TLCD1Q96CP7 247 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 ITPKCQ96DU7 683 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 GANQ9H2C0 597 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 CCSER2Q9H7U1 834 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 RPF1Q9H9Y2 349 aaKnown RBP5.89□□□□□ -1.47
SCARB2-218ENST00000639715 ZNF302Q9NR11 478 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 INIPQ9NRY2 104 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 SLC9A2Q9UBY0 812 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 SEPT3Q9UH03 358 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 ATPIF1Q9UII2 106 aa5.89□□□□□ -1.47
SCARB2-218ENST00000639715 CCRL2O00421 344 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 EPHB6O15197 1021 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 PRPSAP2O60256 369 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 KRT37O76014 449 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 SEMA3DO95025 777 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 PRKACAP17612 351 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 CD58P19256 250 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms