RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 MBD4O95243 580 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 DDX58O95786 925 aaKnown RBP3.41□□□□□ -1.86
GYPB-216ENST00000638448 TFRCP02786 760 aaKnown RBP3.41□□□□□ -1.86
GYPB-216ENST00000638448 PRKCBP05771 671 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 PYGLP06737 847 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 ANXA6P08133 673 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 CKMT1AP12532 417 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 PECAM1P16284 738 aaPredicted RBP3.41□□□□□ -1.86
GYPB-216ENST00000638448 ITGALP20701 1170 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 ELF1P32519 619 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 RABGGTBP53611 331 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 BCAT1P54687 386 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 KRT17Q04695 432 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 UBE3AQ05086 875 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 SCAPQ12770 1279 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 GPS1Q13098 491 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 CCNIQ14094 377 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 BOP1Q14137 746 aaKnown RBP3.41□□□□□ -1.86
GYPB-216ENST00000638448 TAF5Q15542 800 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 SLC4A8Q2Y0W8 1093 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 ANKRD45Q5TZF3 282 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 C1QL3Q5VWW1 255 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 TTLL5Q6EMB2 1281 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 FAAH2Q6GMR7 532 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 MZT2BQ6NZ67 158 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 TAF2Q6P1X5 1199 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 DSTYKQ6XUX3 929 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 C1orf122Q6ZSJ8 110 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 BBS12Q6ZW61 710 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 USP49Q70CQ1 688 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 MAATS1Q7Z4T9 603 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 CLNKQ7Z7G1 428 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 C2CD5Q86YS7 1000 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 SYT12Q8IV01 421 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 CCDC117Q8IWD4 279 aaPredicted RBP3.41□□□□□ -1.86
GYPB-216ENST00000638448 SUGP1Q8IWZ8 645 aaKnown RBP3.41□□□□□ -1.86
GYPB-216ENST00000638448 ESX1Q8N693 406 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 RNF169Q8NCN4 708 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 WDR60Q8WVS4 1066 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 ASB12Q8WXK4 309 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 FUBP1Q96AE4 644 aaKnown RBP3.41□□□□□ -1.86
GYPB-216ENST00000638448 TMEM176AQ96HP8 235 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 PLEKHG4BQ96PX9 1271 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 PAAF1Q9BRP4 392 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 SPON1Q9HCB6 807 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 RIC8AQ9NPQ8 531 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 TMEM160Q9NX00 188 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 NDUFAF4Q9P032 175 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 FEM1BQ9UK73 627 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 SCAF8Q9UPN6 1271 aaKnown RBP3.41□□□□□ -1.86
GYPB-216ENST00000638448 CDYLQ9Y232 598 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 CHST2Q9Y4C5 530 aa3.41□□□□□ -1.86
GYPB-216ENST00000638448 PRAMEF33A0A0G2JMD5 474 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 A0A1B0GTW7 788 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 GAGE12BA1L429 117 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 GAGE12HA6NDE8 117 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 SAC3D1A6NKF1 404 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 CAPN14A8MX76 684 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 B4E171 279 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 FCHO1O14526 889 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 TSPAN3O60637 253 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 PRAMEF10O60809 474 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 CBFA2T3O75081 653 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 TMEM63AO94886 807 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 PRSS23O95084 383 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 LARGE1O95461 756 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 CENPBP07199 599 aaPredicted RBP3.4□□□□□ -1.87
GYPB-216ENST00000638448 CNPP09543 421 aaKnown RBP3.4□□□□□ -1.87
GYPB-216ENST00000638448 SPATA31D3P0C874 917 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 CAPN3P20807 821 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 RBL1P28749 1068 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 EPHA3P29320 983 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 MCM7P33993 719 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 TSPAN7P41732 249 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 ZNF134P52741 427 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 LILRA4P59901 499 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 HHEXQ03014 270 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 TRPC3Q13507 836 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 E2F2Q14209 437 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 SMAD1Q15797 465 aaKnown RBP3.4□□□□□ -1.87
GYPB-216ENST00000638448 ZIK1Q3SY52 487 aaPredicted RBP3.4□□□□□ -1.87
GYPB-216ENST00000638448 TBRG1Q3YBR2 411 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 CACHD1Q5VU97 1274 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 SPATA31D4Q6ZUB0 917 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 MICALCLQ6ZW33 695 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 CPOQ8IVL8 374 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 SPARTQ8N0X7 666 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 D2HGDHQ8N465 521 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 Q8NA96 180 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 OR56A1Q8NGH5 318 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 RUBCNQ92622 972 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 RSPRY1Q96DX4 576 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 BOD1Q96IK1 185 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 NEU1Q99519 415 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 EIF2AK1Q9BQI3 630 aaKnown RBP3.4□□□□□ -1.87
GYPB-216ENST00000638448 CXorf36Q9H7Y0 433 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 MLXIPQ9HAP2 919 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 TMEM74BQ9NUR3 256 aa3.4□□□□□ -1.87
GYPB-216ENST00000638448 MRPS18AQ9NVS2 196 aaKnown RBP3.4□□□□□ -1.87
GYPB-216ENST00000638448 RNF181Q9P0P0 153 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms