RNA–Protein interactions for RNA: ENST00000638443.1

ATM-226, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 2,146 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-226ENST00000638443 KIAA1257Q9ULG3 409 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 HPCAL4Q9UM19 191 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 TDRD15B5MCY1 1934 aaKnown RBP10.37□□□□□ -0.75
ATM-226ENST00000638443 MYBPHLA2RUH7 354 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 C2CD4BA6NLJ0 364 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 C9IYK1 514 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 GABRDO14764 452 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 PQBP1O60828 265 aaKnown RBP10.37□□□□□ -0.75
ATM-226ENST00000638443 TUBBP07437 444 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 MIPP30301 263 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 COILP38432 576 aaPredicted RBP10.37□□□□□ -0.75
ATM-226ENST00000638443 RAB27AP51159 221 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 BCAT1P54687 386 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 EPHB4P54760 987 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 BST2Q10589 180 aaKnown RBP10.37□□□□□ -0.75
ATM-226ENST00000638443 TRIP13Q15645 432 aaPredicted RBP10.37□□□□□ -0.75
ATM-226ENST00000638443 CYP1B1Q16678 543 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 QPCTQ16769 361 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 DSTYKQ6XUX3 929 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 CYP4V2Q6ZWL3 525 aaPredicted RBP10.37□□□□□ -0.75
ATM-226ENST00000638443 LRRC8DQ7L1W4 858 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 CCDC105Q8IYK2 499 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 RTP3Q9BQQ7 232 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 GPATCH2LQ9NWQ4 482 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 SAGE1Q9NXZ1 904 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 SAE1Q9UBE0 346 aaPredicted RBP10.37□□□□□ -0.75
ATM-226ENST00000638443 SNX24Q9Y343 169 aa10.37□□□□□ -0.75
ATM-226ENST00000638443 DDHD2O94830 711 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 RPLP2P05387 115 aaKnown RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 PDGFRAP16234 1089 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 PTPN1P18031 435 aaKnown RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 GPD1P21695 349 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 DYNLT1P63172 113 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 TAP1Q03518 808 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 ADIGQ0VDE8 80 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 STILQ15468 1287 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 CCDC14Q49A88 953 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 GPRIN1Q7Z2K8 1008 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 TMEM110Q86TL2 294 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 PIGZQ86VD9 579 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 WDR75Q8IWA0 830 aaKnown RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 KRT222Q8N1A0 295 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 ANKRD52Q8NB46 1076 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 EXD1Q8NHP7 514 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 CCDC26Q8TAB7 109 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 HSPH1Q92598 858 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 PCED1BQ96HM7 432 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 SCLYQ96I15 445 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 KCNK16Q96T55 309 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 SYT15Q9BQS2 421 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 MAGEB5Q9BZ81 275 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 RNF208Q9H0X6 261 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 FAM124BQ9H5Z6 455 aaPredicted RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 PAK6Q9NQU5 681 aaPredicted RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 KRT82Q9NSB4 513 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 CALCOCO1Q9P1Z2 691 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 WDR35Q9P2L0 1181 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 C3orf70A6NLC5 250 aaPredicted RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 DNM1LO00429 736 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 OAS2P29728 719 aaKnown RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 CHRNA3P32297 505 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 RPL21P46778 160 aaKnown RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 NDUFV1P49821 464 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 CDK7P50613 346 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 ZNF143P52747 638 aaPredicted RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 BCAR1P56945 870 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 MAP3K7CLP57077 242 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 GRIK3Q13003 919 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 UBAP2Q5T6F2 1119 aaKnown RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 SPOCD1Q6ZMY3 1216 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 CLEC20AQ6ZU45 233 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 MAATS1Q7Z4T9 603 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 DBF4BQ8NFT6 615 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 FNIP1Q8TF40 1166 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 RUBCNQ92622 972 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 TNIP3Q96KP6 325 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 DCLK3Q9C098 648 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 RSPH9Q9H1X1 276 aaPredicted RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 C10orf88Q9H8K7 445 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 NGRNQ9NPE2 291 aaKnown RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 CASS4Q9NQ75 786 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 RGS18Q9NS28 235 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 DNAJB4Q9UDY4 337 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 MTUS1Q9ULD2 1270 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 USP18Q9UMW8 372 aa10.36□□□□□ -0.75
ATM-226ENST00000638443 UTP11Q9Y3A2 253 aaKnown RBP10.36□□□□□ -0.75
ATM-226ENST00000638443 hCG_1818297A0A087WSY0 165 aa10.35□□□□□ -0.75
ATM-226ENST00000638443 ENPP3O14638 875 aa10.35□□□□□ -0.75
ATM-226ENST00000638443 CCL5P13501 91 aa10.35□□□□□ -0.75
ATM-226ENST00000638443 HSPA6P17066 643 aa10.35□□□□□ -0.75
ATM-226ENST00000638443 CDKN2BP42772 138 aa10.35□□□□□ -0.75
ATM-226ENST00000638443 AARSP49588 968 aaKnown RBP eCLIP10.35□□□□□ -0.75
ATM-226ENST00000638443 VPS41P49754 854 aa10.35□□□□□ -0.75
ATM-226ENST00000638443 PITX1P78337 314 aaPredicted RBP10.35□□□□□ -0.75
ATM-226ENST00000638443 SLC6A3Q01959 620 aa10.35□□□□□ -0.75
ATM-226ENST00000638443 MMRN1Q13201 1228 aa10.35□□□□□ -0.75
ATM-226ENST00000638443 DUPD1Q68J44 220 aa10.35□□□□□ -0.75
ATM-226ENST00000638443 C12orf50Q8NA57 414 aaPredicted RBP10.35□□□□□ -0.75
ATM-226ENST00000638443 GLIS1Q8NBF1 620 aa10.35□□□□□ -0.75
ATM-226ENST00000638443 OR10T2Q8NGX3 314 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms