RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 MED15Q96RN5 788 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 SERHL2Q9H4I8 314 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 SERHLQ9NQF3 203 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 SUPT7LO94864 414 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 FMR1Q06787 632 aaKnown RBP eCLIP17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 NR1H3Q13133 447 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 SV2CQ496J9 727 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 PARP9Q8IXQ6 854 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 GUCY1B2O75343 617 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 EFNA5P52803 228 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 C3orf62Q6ZUJ4 267 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 RNFT2Q96EX2 444 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 MPP4Q96JB8 637 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 MTMR4Q9NYA4 1195 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 M0QYT0 321 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 CHN1P15882 459 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 FRMD5Q7Z6J6 570 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 ZNF579Q8NAF0 562 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 CHKBQ9Y259 395 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 TIMM8BQ9Y5J9 83 aaPredicted RBP17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 HNF4AP41235 474 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 FGD3Q5JSP0 725 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 OLFML2AQ68BL7 652 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 RFFLQ8WZ73 363 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 FBXO32Q969P5 355 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 IARS2Q9NSE4 1012 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 VPS28Q9UK41 221 aa17.54■□□□□ 0.4
CACNA1A-253ENST00000637927 PVALEFA0A1B0GWK0 134 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 PRODHO43272 600 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 PSMA3P25788 255 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 BOP1Q14137 746 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 STOX1Q6ZVD7 989 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 TMC7Q7Z402 723 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 EMID1Q96A84 441 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 TOR4AQ9NXH8 423 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 HERC5Q9UII4 1024 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 SAMD9LQ8IVG5 1584 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 C17orf102A2RUQ5 167 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 TMEM191CA6NGB0 347 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 ZNF286BP0CG31 522 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 SERPINB1P30740 379 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 CYP2C19P33261 490 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 HSPA9P38646 679 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 TRIM72Q6ZMU5 477 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 GPRC5AQ8NFJ5 357 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 TMEM169Q96HH4 297 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 NEU2Q9Y3R4 380 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 STON1Q9Y6Q2 735 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 HLA-DRAP01903 254 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 CLTBP09497 229 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 PSMC3P17980 439 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 GRK3P35626 688 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 CYP20A1Q6UW02 462 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 OMA1Q96E52 524 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 NRKQ7Z2Y5 1582 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 MAPRE2Q15555 327 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 FAM171BQ6P995 826 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 CSGALNACT1Q8TDX6 532 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 USP13Q92995 863 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 PHACTR1Q9C0D0 580 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 DIABLOQ9NR28 239 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 UBAP1Q9NZ09 502 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 ERCC2P18074 760 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 ATP2C1P98194 919 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 HPDLQ96IR7 371 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 GPSM3Q9Y4H4 160 aa17.53■□□□□ 0.4
CACNA1A-253ENST00000637927 MYMKA6NI61 221 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 KCNJ1P48048 391 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 NPEPPSP55786 919 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 KIAA1324Q6UXG2 1013 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 STAMBPL1Q96FJ0 436 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 FZD1Q9UP38 647 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 PHF20L1A8MW92 1017 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 FMO5P49326 533 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 SARSP49591 514 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 TAP1Q03518 808 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 SETD6Q8TBK2 473 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 GINS4Q9BRT9 223 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 KLHL3Q9UH77 587 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 CLEC4AQ9UMR7 237 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 ADCY6O43306 1168 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 OTUD4Q01804 1114 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 RSBN1Q5VWQ0 802 aaPredicted RBP17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 FIG4Q92562 907 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 ARHGEF26Q96DR7 871 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 OR6B1O95007 311 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 KCNA3P22001 575 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 TMEM132BQ14DG7 1078 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 ERMARDQ5T6L9 678 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 EFL1Q7Z2Z2 1120 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 C2orf73Q8N5S3 287 aaPredicted RBP17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 CATSPERBQ9H7T0 1116 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 GPRC5CQ9NQ84 441 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 DPP3Q9NY33 737 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 PLA2G4CQ9UP65 541 aa17.52■□□□□ 0.4
CACNA1A-253ENST00000637927 STX7O15400 261 aaKnown RBP17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 VCLP18206 1134 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 GRK4P32298 578 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 CASP4P49662 377 aa17.52■□□□□ 0.39
CACNA1A-253ENST00000637927 FBXO16Q8IX29 292 aaPredicted RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms