RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 CENPUQ71F23 418 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 PIGZQ86VD9 579 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 CEP57Q86XR8 500 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 SCN4BQ8IWT1 228 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 TRIB2Q92519 343 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 EDEM1Q92611 657 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 CFAP36Q96G28 342 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 SENP8Q96LD8 212 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 CCT8L2Q96SF2 557 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 PRMT1Q99873 361 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 PLEKHA5Q9HAU0 1116 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 NKIRAS1Q9NYS0 192 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 CHMP2BQ9UQN3 213 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 SBF1O95248 1867 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 TTC4O95801 387 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 TRUB2O95900 331 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 STX2P32856 288 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 ZNF143P52747 638 aaPredicted RBP10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 SLC6A3Q01959 620 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 CACNB2Q08289 660 aaPredicted RBP10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 TFDP2Q14188 446 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 TCEAL1Q15170 157 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 KCNA10Q16322 511 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 TAF2Q6P1X5 1199 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 KDM7AQ6ZMT4 941 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 NLRP14Q86W24 1093 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 PDIK1LQ8N165 341 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 C4orf33Q8N1A6 199 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 MICALL1Q8N3F8 863 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 OTUD6BQ8N6M0 293 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 ARFGAP1Q8N6T3 406 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 UBR7Q8N806 425 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 RAET1EQ8TD07 263 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 SIK2Q9H0K1 926 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 TRMT13Q9NUP7 481 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 FAM105AQ9NUU6 356 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 NINJ2Q9NZG7 142 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 GGT7Q9UJ14 662 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 RRP15Q9Y3B9 282 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 TRIM66O15016 1216 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 AP1G2O75843 785 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 SSTR1P30872 391 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 ARL4AP40617 200 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 BRCC3P46736 316 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 CLCNKBP51801 687 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 BCAT1P54687 386 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 MRPS6P82932 125 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 CA9Q16790 459 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 DEFB106AQ8N104 65 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 LINC01465Q8N7H1 131 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 TTC13Q8NBP0 860 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 ADAM2Q99965 735 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 SNRNP25Q9BV90 132 aaKnown RBP10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 RSAD1Q9HA92 442 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 KRT82Q9NSB4 513 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 NUDT5Q9UKK9 219 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 KIAA1257Q9ULG3 409 aa10.11□□□□□ -0.79
CACNA1A-248ENST00000637774 ZNFX1Q9P2E3 1918 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 H0YGN5 161 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 M0QYT0 321 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 APOL1O14791 398 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 BST2Q10589 180 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 STILQ15468 1287 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 TRMT10CQ7L0Y3 403 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 ZNF354CQ86Y25 554 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 TTC39CQ8N584 583 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 SLC7A14Q8TBB6 771 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 CCDC110Q8TBZ0 833 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 PEBP4Q96S96 227 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 PAAF1Q9BRP4 392 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 TMPRSS4Q9NRS4 437 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 XPO7Q9UIA9 1087 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 NFS1Q9Y697 457 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 DUSP11O75319 330 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 NCAM1P13591 858 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 AMPD1P23109 780 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 CCND3P30281 292 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 TKTL1P51854 596 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 KLF1Q13351 362 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 FAM47EQ6ZV65 393 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 SYDE1Q6ZW31 735 aaPredicted RBP10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 NT5DC4Q86YG4 428 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 PYROXD2Q8N2H3 581 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 EIF1ADQ8N9N8 165 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 B3GALNT2Q8NCR0 500 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 KCNK16Q96T55 309 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 AGO3Q9H9G7 860 aaKnown RBP10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 LCMT1Q9UIC8 334 aa10.1□□□□□ -0.79
CACNA1A-248ENST00000637774 GMNCA6NCL1 334 aa10.09□□□□□ -0.79
CACNA1A-248ENST00000637774 DNALI1O14645 258 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-248ENST00000637774 CSPG5O95196 566 aa10.09□□□□□ -0.79
CACNA1A-248ENST00000637774 AP1B1Q10567 949 aa10.09□□□□□ -0.79
CACNA1A-248ENST00000637774 CCDC14Q49A88 953 aa10.09□□□□□ -0.79
CACNA1A-248ENST00000637774 EP400NLQ6ZTU2 488 aa10.09□□□□□ -0.79
CACNA1A-248ENST00000637774 C3orf62Q6ZUJ4 267 aa10.09□□□□□ -0.79
CACNA1A-248ENST00000637774 IFNLR1Q8IU57 520 aaPredicted RBP10.09□□□□□ -0.79
CACNA1A-248ENST00000637774 ELAC2Q9BQ52 826 aaKnown RBP10.09□□□□□ -0.79
CACNA1A-248ENST00000637774 RHOBTB2Q9BYZ6 727 aa10.09□□□□□ -0.79
CACNA1A-248ENST00000637774 PADI3Q9ULW8 664 aa10.09□□□□□ -0.79
CACNA1A-248ENST00000637774 TRPV2Q9Y5S1 764 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms