RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 PLA2G6O60733 806 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 ATP6V1C1P21283 382 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 GCLCP48506 637 aaPredicted RBP12.14□□□□□ -0.47
SHPRH-211ENST00000629427 LHX1P48742 406 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 BACE1P56817 501 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 B3GALNT2Q8NCR0 500 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 SEC16BQ96JE7 1060 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 NT5MQ9NPB1 228 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 CBX4O00257 560 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 CPSF4O95639 269 aaKnown RBP12.14□□□□□ -0.47
SHPRH-211ENST00000629427 POMCP01189 267 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 AMPD2Q01433 879 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 BOLA3Q53S33 107 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 RD3Q7Z3Z2 195 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 ERP44Q9BS26 406 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 RUSC1Q9BVN2 902 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 IARS2Q9NSE4 1012 aaKnown RBP12.14□□□□□ -0.47
SHPRH-211ENST00000629427 DCDC2Q9UHG0 476 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 M0R3G1 203 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 CRTAMO95727 393 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 PYGMP11217 842 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 CCNG1P51959 295 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 USP39Q53GS9 565 aaKnown RBP12.14□□□□□ -0.47
SHPRH-211ENST00000629427 KCNT1Q5JUK3 1230 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 AHCYL2Q96HN2 611 aaKnown RBP12.14□□□□□ -0.47
SHPRH-211ENST00000629427 CCT8L2Q96SF2 557 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 THAP2Q9H0W7 228 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 RMND5AQ9H871 391 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 FBXL21Q9UKT6 434 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 USP18Q9UMW8 372 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 SLC37A4O43826 429 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 USP1O94782 785 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 STAU1O95793 577 aaKnown RBP12.14□□□□□ -0.47
SHPRH-211ENST00000629427 SUPT20HL2P0C7V6 817 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 FGFR2P21802 821 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 GLRBP48167 497 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 CASP4P49662 377 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 BARGINQ6ZT62 677 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 TRPM8Q7Z2W7 1104 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 MKNK1Q9BUB5 465 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 IGFLR1Q9H665 355 aa12.14□□□□□ -0.47
SHPRH-211ENST00000629427 RGS5O15539 181 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 PSTPIP1O43586 416 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 ALDH9A1P49189 494 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 DAB2IPQ5VWQ8 1189 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 ZNF512BQ96KM6 892 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 BBS2Q9BXC9 721 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 THG1LQ9NWX6 298 aaKnown RBP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 ABCA6Q8N139 1617 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 SMAPO00193 183 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 PPP1R37O75864 691 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 TMEM253P0C7T8 217 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 RAG1P15918 1043 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 CPA2P48052 419 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 SLC29A2Q14542 456 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 LRRC8DQ7L1W4 858 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 AGGF1Q8N302 714 aaeCLIP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 CAMKK2Q96RR4 588 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 PSMA4P25789 261 aaKnown RBP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 ITPK1Q13572 414 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 C2CD6Q53TS8 623 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 WLSQ5T9L3 541 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 IRAK1BP1Q5VVH5 260 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 ERLEC1Q96DZ1 483 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 POP1Q99575 1024 aaKnown RBP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 CNTNAP2Q9UHC6 1331 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 GPR75-ASB3A0A0A6YYF3 556 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 A0A1W2PQJ5 194 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 RGL2O15211 777 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 VDRP11473 427 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 TNNI3P19429 210 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 AGBL2Q5U5Z8 902 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 CD302Q8IX05 232 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 CCDC126Q96EE4 140 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 FAR2Q96K12 515 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 PRMT6Q96LA8 375 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 ROPN1BQ9BZX4 212 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 ROPN1Q9HAT0 212 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 TMEM39AQ9NV64 488 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 FBXO10Q9UK96 956 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 CYP7B1O75881 506 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 SERPINB8P50452 374 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 TRIP10Q15642 601 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 IFNLR1Q8IU57 520 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 TPCN2Q8NHX9 752 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 MTERF3Q96E29 417 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 MAP3K14Q99558 947 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 SENP2Q9HC62 589 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 EPB41L4AQ9HCS5 686 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 MIEF1Q9NQG6 463 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 TMCC3Q9ULS5 477 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 TBKBP1A7MCY6 615 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 TRIM49D1C9J1S8 452 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 XPO1O14980 1071 aaKnown RBP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 PON1P27169 355 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 FAM172AQ8WUF8 416 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 UBE2OQ9C0C9 1292 aaKnown RBP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 GBA2Q9HCG7 927 aaPredicted RBP12.13□□□□□ -0.47
SHPRH-211ENST00000629427 PXMP2Q9NR77 195 aa12.13□□□□□ -0.47
SHPRH-211ENST00000629427 TDRKHQ9Y2W6 561 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms