RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 FAM84AQ96KN4 292 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 TSG101Q99816 390 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 KXD1Q9BQD3 176 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 RTP3Q9BQQ7 232 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 PI4K2AQ9BTU6 479 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 GTPBP4Q9BZE4 634 aaKnown RBP6.84□□□□□ -1.31
TCF4-249ENST00000625716 ATXN3LQ9H3M9 355 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 ZFP14Q9HCL3 533 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 MAGEC2Q9UBF1 373 aaPredicted RBP6.84□□□□□ -1.31
TCF4-249ENST00000625716 SIX4Q9UIU6 781 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 CA14Q9ULX7 337 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 MAPK8IP1Q9UQF2 711 aa6.84□□□□□ -1.31
TCF4-249ENST00000625716 TRIP11Q15643 1979 aa6.84□□□□□ -1.32
TCF4-249ENST00000625716 VWA8A3KMH1 1905 aa6.84□□□□□ -1.32
TCF4-249ENST00000625716 PTPRJQ12913 1337 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 KINO60870 393 aaKnown RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 SOAT2O75908 522 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 VNN2O95498 520 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 PDGFBP01127 241 aaPredicted RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 PDGFRBP09619 1106 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 FAM163BP0C2L3 166 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 HAPLN1P10915 354 aaPredicted RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 NR2F2P24468 414 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 ACAT1P24752 427 aaKnown RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 GABRR2P28476 465 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 CDC25CP30307 473 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 GNL1P36915 607 aaPredicted RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 ANP32AP39687 249 aaKnown RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 CLCN5P51795 746 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 EPHA5P54756 1037 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 MYL6P60660 151 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 GPC5P78333 572 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 ADAM9Q13443 819 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 PNOCQ13519 176 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 STIM1Q13586 685 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 TEAD2Q15562 447 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 SOWAHAQ2M3V2 549 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 ZNF699Q32M78 642 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 ZNF667Q5HYK9 610 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 FAM78AQ5JUQ0 283 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 COX20Q5RI15 118 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 LRRTM3Q86VH5 581 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 SCN4BQ8IWT1 228 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 YAF2Q8IY57 180 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 GUF1Q8N442 669 aaKnown RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 CCDC150Q8NCX0 1101 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 OR6B3Q8NGW1 331 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 CXorf38Q8TB03 319 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 GPR152Q8TDT2 470 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 PARD3BQ8TEW8 1205 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 GIPC2Q8TF65 315 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 TMEM174Q8WUU8 243 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 TTC9Q92623 222 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 SMARCD2Q92925 531 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 SMARCE1Q969G3 411 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 PSMG2Q969U7 264 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 ELSPBP1Q96BH3 223 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 TCEAL4Q96EI5 215 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 TIGD1Q96MW7 591 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 GSDMAQ96QA5 445 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 RPP25Q9BUL9 199 aaKnown RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 TRMT61BQ9BVS5 477 aaKnown RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 IMPG2Q9BZV3 1241 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 DNAI2Q9GZS0 605 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 IRF2BPLQ9H1B7 796 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 KCTD10Q9H3F6 313 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 ABCB6Q9NP58 842 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 ARHGEF3Q9NR81 526 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 SLC2A4RGQ9NR83 387 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 FRRS1LQ9P0K9 344 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 UXTQ9UBK9 157 aaPredicted RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 GTF3C4Q9UKN8 822 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 CDH9Q9ULB4 789 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 MAGED2Q9UNF1 606 aaPredicted RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 TRAF3IP3Q9Y228 551 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 BDP1A6H8Y1 2624 aa6.83□□□□□ -1.32
TCF4-249ENST00000625716 MTCL1Q9Y4B5 1905 aaKnown RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 PDCD11Q14690 1871 aaKnown RBP6.83□□□□□ -1.32
TCF4-249ENST00000625716 DENND4AQ7Z401 1863 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 LRRIQ3A6PVS8 624 aaPredicted RBP6.82□□□□□ -1.32
TCF4-249ENST00000625716 A8MXQ7 604 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 GABRDO14764 452 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 IKBKBO14920 756 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 ZNF263O14978 683 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 MAPK13O15264 365 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 STX10O60499 249 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 DEAF1O75398 565 aaPredicted RBP6.82□□□□□ -1.32
TCF4-249ENST00000625716 TACC1O75410 805 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 CST3P01034 146 aaPredicted RBP6.82□□□□□ -1.32
TCF4-249ENST00000625716 H2AFB1P0C5Y9 115 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 H2AFB2P0C5Z0 115 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 CSH1P0DML2 217 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 CSH2P0DML3 217 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 RARAP10276 462 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 EPB42P16452 691 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 GJA1P17302 382 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 PSMC3P17980 439 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 WARSP23381 471 aaKnown RBP6.82□□□□□ -1.32
TCF4-249ENST00000625716 LMO2P25791 158 aa6.82□□□□□ -1.32
TCF4-249ENST00000625716 ANXA13P27216 316 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms