RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TRPV1Q8NER1 839 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 SPATA18Q8TC71 538 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 ATXN2LQ8WWM7 1075 aaKnown RBP20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 ARHGEF2Q92974 986 aaKnown RBP20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 TBCBQ99426 244 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 C10orf88Q9H8K7 445 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 NGRNQ9NPE2 291 aaKnown RBP20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 LGALS13Q9UHV8 139 aa20.61■□□□□ 0.89
PCDHB11-202ENST00000624887 ALDH1A1P00352 501 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 RBP3P10745 1247 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 CTGFP29279 349 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 LRPAP1P30533 357 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 SCNN1AP37088 669 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 CTCFP49711 727 aaPredicted RBP20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 LILRA4P59901 499 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 NOGQ13253 232 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 NOMO1Q15155 1222 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 CCDC38Q502W7 563 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 VSIG1Q86XK7 387 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 SPATS2Q86XZ4 545 aaKnown RBP20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 UNC45BQ8IWX7 931 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 PPIL6Q8IXY8 311 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 RNF157Q96PX1 679 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 CTNNAL1Q9UBT7 734 aa20.6■□□□□ 0.89
PCDHB11-202ENST00000624887 A0A087WUV0 522 aaPredicted RBP20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 ALOX15BO15296 676 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 HUS1O60921 280 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 CDH16O75309 829 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 ADORA2BP29275 332 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 RPL22P35268 128 aaKnown RBP20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 GJA9P57773 515 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 MRPS6P82932 125 aaKnown RBP20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 KRT81Q14533 505 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 SCYL2Q6P3W7 929 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 CENPUQ71F23 418 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 SLC26A9Q7LBE3 791 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 ARCQ7LC44 396 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 ADGRF2Q8IZF7 708 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 TOP6BLQ8N6T0 577 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 MTG1Q9BT17 334 aaPredicted RBP20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 PHACTR1Q9C0D0 580 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 PTGESO14684 152 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 MDM4O15151 490 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 CAPN15O75808 1086 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 IL4RP24394 825 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 RDXP35241 583 aaKnown RBP20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 PTPN9P43378 593 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 GNASQ5JWF2 1037 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 CPT1BQ92523 772 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 TNIP3Q96KP6 325 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 PPP1R10Q96QC0 940 aaKnown RBP20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 FAM107BQ9H098 131 aa20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 INTS9Q9NV88 658 aaKnown RBP20.59■□□□□ 0.89
PCDHB11-202ENST00000624887 SCN10AQ9Y5Y9 1956 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 C5orf60A6NFR6 353 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 M0QZ92 97 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 WARSP23381 471 aaKnown RBP20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 STIP1P31948 543 aaKnown RBP20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 ACADSBP45954 432 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 HDAC4P56524 1084 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 FASTKD3Q14CZ7 662 aaKnown RBP20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 NAT8LQ8N9F0 302 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 FAM71DQ8N9W8 422 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 SLC2A14Q8TDB8 520 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 P3H4Q92791 437 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 HSFY1Q96LI6 401 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 C11orf84Q9BUA3 381 aaPredicted RBP20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 CCDC134Q9H6E4 229 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 EURLQ9NYK6 297 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 GTF2IRD1Q9UHL9 959 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 GGA2Q9UJY4 613 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 CDY2AQ9Y6F7 541 aa20.58■□□□□ 0.89
PCDHB11-202ENST00000624887 MYO1CO00159 1063 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 SMAPO00193 183 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 CYBAP13498 195 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 ROR1Q01973 937 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 NPNTQ6UXI9 565 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 RIBC1Q8N443 379 aaPredicted RBP20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 CLEC4CQ8WTT0 213 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 CENPIQ92674 756 aaPredicted RBP20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 SNRNP25Q9BV90 132 aaKnown RBP20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 PCDH18Q9HCL0 1135 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 NAALADL1Q9UQQ1 740 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 TRPV2Q9Y5S1 764 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 FAM169AQ9Y6X4 670 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 FAM163BP0C2L3 166 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 HIF1AQ16665 826 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 NBPF20Q3BBV1 942 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 ZC3H12AQ5D1E8 599 aaKnown RBP20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 ZBED8Q8IZ13 594 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 PLD5Q8N7P1 536 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 B3GALNT2Q8NCR0 500 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 CHMP6Q96FZ7 201 aa20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.57■□□□□ 0.88
PCDHB11-202ENST00000624887 ATXN2Q99700 1313 aaKnown RBP20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 ZNF487B1APH4 448 aa20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 LCP1P13796 627 aa20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 TGM2P21980 687 aa20.56■□□□□ 0.88
PCDHB11-202ENST00000624887 FCGRTP55899 365 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms