RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 HERPUD2Q9BSE4 406 aa10.84□□□□□ -0.67
ATRX-216ENST00000624403 CNPY3Q9BT09 278 aa10.84□□□□□ -0.67
ATRX-216ENST00000624403 PLVAPQ9BX97 442 aa10.84□□□□□ -0.67
ATRX-216ENST00000624403 C11orf49Q9H6J7 331 aa10.84□□□□□ -0.67
ATRX-216ENST00000624403 KRT82Q9NSB4 513 aa10.84□□□□□ -0.67
ATRX-216ENST00000624403 KLHL11Q9NVR0 708 aa10.84□□□□□ -0.67
ATRX-216ENST00000624403 STIM2Q9P246 746 aa10.84□□□□□ -0.67
ATRX-216ENST00000624403 DNAJB4Q9UDY4 337 aa10.84□□□□□ -0.67
ATRX-216ENST00000624403 PI4K2BG5E9Z4 385 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 PHF2O75151 1096 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 LRCH4O75427 683 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 ERLIN1O75477 346 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 AP1G2O75843 785 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 HEXIM1O94992 359 aaKnown RBP10.83□□□□□ -0.68
ATRX-216ENST00000624403 ZRANB2O95218 330 aaKnown RBP eCLIP10.83□□□□□ -0.68
ATRX-216ENST00000624403 GLI1P08151 1106 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 PDGFRAP16234 1089 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 SCNN1AP37088 669 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 LBX1P52954 281 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 MAP3K7CLP57077 242 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 SLC8A3P57103 927 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 USP46P62068 366 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 SLC25A11Q02978 314 aaKnown RBP10.83□□□□□ -0.68
ATRX-216ENST00000624403 ACAP1Q15027 740 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 PKN2Q16513 984 aaKnown RBP10.83□□□□□ -0.68
ATRX-216ENST00000624403 PPP2R5EQ16537 467 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 CCDC14Q49A88 953 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 FAM171BQ6P995 826 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 CCNI2Q6ZMN8 369 aaPredicted RBP10.83□□□□□ -0.68
ATRX-216ENST00000624403 CLEC20AQ6ZU45 233 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 ANKS1BQ7Z6G8 1248 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 NPAS4Q8IUM7 802 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 CCDC50Q8IVM0 306 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 RCOR2Q8IZ40 523 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 THEM5Q8N1Q8 247 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 OR10T2Q8NGX3 314 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 HNRNPLLQ8WVV9 542 aaKnown RBP10.83□□□□□ -0.68
ATRX-216ENST00000624403 KCTD13Q8WZ19 329 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 MYLPFQ96A32 169 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 ACSF2Q96CM8 615 aaPredicted RBP10.83□□□□□ -0.68
ATRX-216ENST00000624403 PCED1BQ96HM7 432 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 RBM41Q96IZ5 413 aaKnown RBP10.83□□□□□ -0.68
ATRX-216ENST00000624403 TMEM209Q96SK2 561 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 SMOQ99835 787 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 PLEKHA4Q9H4M7 779 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 NRDE2Q9H7Z3 1164 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 ZWILCHQ9H900 591 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 TMEM39AQ9NV64 488 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 TMLHEQ9NVH6 421 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 ASNSD1Q9NWL6 643 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 DDX56Q9NY93 547 aaKnown RBP10.83□□□□□ -0.68
ATRX-216ENST00000624403 MTUS1Q9ULD2 1270 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 PRG3Q9Y2Y8 225 aaPredicted RBP10.83□□□□□ -0.68
ATRX-216ENST00000624403 TANC1Q9C0D5 1861 aa10.83□□□□□ -0.68
ATRX-216ENST00000624403 TDRD15B5MCY1 1934 aaKnown RBP10.82□□□□□ -0.68
ATRX-216ENST00000624403 TSC2P49815 1807 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 ZSCAN5CA6NGD5 496 aaPredicted RBP10.82□□□□□ -0.68
ATRX-216ENST00000624403 TBKBP1A7MCY6 615 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 TADA2AO75478 443 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 RNF8O76064 485 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 CLTBP09497 229 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 RALAP11233 206 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 IL1R2P27930 398 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 TNFRSF8P28908 595 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 MIPP30301 263 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 CHRNA3P32297 505 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 PCK1P35558 622 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 PTGIRP43119 386 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 RABGGTBP53611 331 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 CACNA2D1P54289 1103 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 BCAR1P56945 870 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 GUCY2DQ02846 1103 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 ADCY1Q08828 1119 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 ADIGQ0VDE8 80 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 CYP1B1Q16678 543 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 HADHQ16836 314 aaKnown RBP10.82□□□□□ -0.68
ATRX-216ENST00000624403 LRRC26Q2I0M4 334 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 C15orf59Q2T9L4 293 aaPredicted RBP10.82□□□□□ -0.68
ATRX-216ENST00000624403 RAB6CQ53S08 254 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 BEND6Q5SZJ8 279 aaPredicted RBP10.82□□□□□ -0.68
ATRX-216ENST00000624403 ZFYVE27Q5T4F4 411 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 SH3PXD2AQ5TCZ1 1133 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 ZNF697Q5TEC3 545 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 TTC27Q6P3X3 843 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 SPOCD1Q6ZMY3 1216 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.82□□□□□ -0.68
ATRX-216ENST00000624403 SLC26A9Q7LBE3 791 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 POLNQ7Z5Q5 900 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 LRRTM3Q86VH5 581 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 IFT20Q8IY31 132 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 GSPT2Q8IYD1 628 aaKnown RBP10.82□□□□□ -0.68
ATRX-216ENST00000624403 ZMIZ2Q8NF64 920 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 CCDC26Q8TAB7 109 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 MAIP1Q8WWC4 291 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 CASKIN2Q8WXE0 1202 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 RAPGEF5Q92565 580 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 NDRG1Q92597 394 aaKnown RBP10.82□□□□□ -0.68
ATRX-216ENST00000624403 MAGOHBQ96A72 148 aaKnown RBP10.82□□□□□ -0.68
ATRX-216ENST00000624403 VWCEQ96DN2 955 aa10.82□□□□□ -0.68
ATRX-216ENST00000624403 PAWRQ96IZ0 340 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms