RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 UVRAGQ9P2Y5 699 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 GNEQ9Y223 722 aaKnown RBP9.46□□□□□ -0.89
HDAC9-229ENST00000622668 E5RJQ4 531 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 RAMP2O60895 175 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 RGS20O76081 388 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 ADH1CP00326 375 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 INHBAP08476 426 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 FSHRP23945 695 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 CLCN1P35523 988 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 GARSP41250 739 aaKnown RBP9.46□□□□□ -0.89
HDAC9-229ENST00000622668 SMARCB1Q12824 385 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 ARID5BQ14865 1188 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 SLC10A6Q3KNW5 377 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 CBWD6Q4V339 395 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 CBWD3Q5JTY5 395 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 CBWD5Q5RIA9 395 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 ZNF771Q7L3S4 317 aaPredicted RBP9.46□□□□□ -0.89
HDAC9-229ENST00000622668 TSC1Q92574 1164 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 KAT5Q92993 513 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 LENG9Q96B70 501 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 FZD8Q9H461 694 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 ABCC13Q9NSE7 274 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 CAPN11Q9UMQ6 739 aa9.46□□□□□ -0.89
HDAC9-229ENST00000622668 FAM155AB1AL88 458 aaPredicted RBP9.46□□□□□ -0.9
HDAC9-229ENST00000622668 ADAMTS3O15072 1205 aa9.46□□□□□ -0.9
HDAC9-229ENST00000622668 KCNN4O15554 427 aa9.46□□□□□ -0.9
HDAC9-229ENST00000622668 RRM1P23921 792 aa9.46□□□□□ -0.9
HDAC9-229ENST00000622668 TUBP50607 506 aa9.46□□□□□ -0.9
HDAC9-229ENST00000622668 TTC31Q49AM3 519 aaPredicted RBP9.46□□□□□ -0.9
HDAC9-229ENST00000622668 ZC3H12AQ5D1E8 599 aaKnown RBP9.46□□□□□ -0.9
HDAC9-229ENST00000622668 PRR23BQ6ZRT6 265 aa9.46□□□□□ -0.9
HDAC9-229ENST00000622668 GRASPQ7Z6J2 395 aaPredicted RBP9.46□□□□□ -0.9
HDAC9-229ENST00000622668 TOP6BLQ8N6T0 577 aa9.46□□□□□ -0.9
HDAC9-229ENST00000622668 CFAP36Q96G28 342 aa9.46□□□□□ -0.9
HDAC9-229ENST00000622668 CHP1Q99653 195 aa9.46□□□□□ -0.9
HDAC9-229ENST00000622668 NEDD8-MDP1E9PL57 170 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 ALDH1A2O94788 518 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 IL1BP01584 269 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 GDI1P31150 447 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 SESN2P58004 480 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-229ENST00000622668 ETF1P62495 437 aaKnown RBP9.45□□□□□ -0.9
HDAC9-229ENST00000622668 DEFB103AP81534 67 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 TCEA2Q15560 299 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 SLC18A3Q16572 532 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 VSTM1Q6UX27 236 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 CELF6Q96J87 481 aaKnown RBP9.45□□□□□ -0.9
HDAC9-229ENST00000622668 MYOCQ99972 504 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 MRPL45Q9BRJ2 306 aaKnown RBP9.45□□□□□ -0.9
HDAC9-229ENST00000622668 ZNF576Q9H609 170 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 WRAP73Q9P2S5 460 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-229ENST00000622668 TLK1Q9UKI8 766 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 JRKLQ9Y4A0 524 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 POLR3GO15318 223 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-229ENST00000622668 DDHD2O94830 711 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 NFATC1O95644 943 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 CAPN2P17655 700 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 GUCY2DQ02846 1103 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 KDSRQ06136 332 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 ZACNQ401N2 412 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 RAP1GAP2Q684P5 730 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 HS6ST3Q8IZP7 471 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 CPA6Q8N4T0 437 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 ARL14EPQ8N8R7 260 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-229ENST00000622668 BPIFA3Q9BQP9 254 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 TAF1P21675 1872 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 CCDC66A2RUB6 948 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 CFAP99D6REC4 459 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 CST8O60676 142 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 TRUB2O95900 331 aaKnown RBP9.45□□□□□ -0.9
HDAC9-229ENST00000622668 COL6A1P12109 1028 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 BMPR1AP36894 532 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 PSEN1P49768 467 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 THOP1P52888 689 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 GCNT1Q02742 428 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 PDK1Q15118 436 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 FBXL19Q6PCT2 694 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 ARHGEF19Q8IW93 802 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 TDHQ8IZJ6 230 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 UBXN6Q9BZV1 441 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 OSGEPL1Q9H4B0 414 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 NRDE2Q9H7Z3 1164 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 ADGRA3Q8IWK6 1321 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 COL2A1P02458 1487 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-229ENST00000622668 FGF19O95750 216 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 APODP05090 189 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 PAEPP09466 180 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 ALDH3A1P30838 453 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 PLA2G4AP47712 749 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 FXR1P51114 621 aaKnown RBP eCLIP9.45□□□□□ -0.9
HDAC9-229ENST00000622668 ACAD10Q6JQN1 1059 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 PDCL2Q8N4E4 241 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 C1orf127Q8N9H9 656 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 TRPV1Q8NER1 839 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 SLC35G2Q8TBE7 412 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 GRIN3AQ8TCU5 1115 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 NFKBIZQ9BYH8 718 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 POPDC2Q9HBU9 364 aa9.45□□□□□ -0.9
HDAC9-229ENST00000622668 BAZ2AQ9UIF9 1905 aaKnown RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.44□□□□□ -0.9
HDAC9-229ENST00000622668 MEI4A8MW99 385 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms