RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 FAM47CQ5HY64 1035 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 RNASEH2BQ5TBB1 312 aaKnown RBP22.25■■□□□ 1.15
LIME1-210ENST00000621325 CYP4F22Q6NT55 531 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 RPAINQ86UA6 219 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 UNC45BQ8IWX7 931 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 ANKRD52Q8NB46 1076 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 ADAM33Q9BZ11 813 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 ST3GAL5Q9UNP4 418 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 XPOTO43592 962 aaKnown RBP22.25■■□□□ 1.15
LIME1-210ENST00000621325 AGTP01019 485 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 LCP1P13796 627 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 GAD2Q05329 585 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 FASTKD3Q14CZ7 662 aaKnown RBP22.25■■□□□ 1.15
LIME1-210ENST00000621325 LIMS2Q7Z4I7 341 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 ADGRF2Q8IZF7 708 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 SELENOSQ9BQE4 189 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 RSAD1Q9HA92 442 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 SAYSD1Q9NPB0 183 aa22.25■■□□□ 1.15
LIME1-210ENST00000621325 E7EVH7 732 aa22.24■■□□□ 1.15
LIME1-210ENST00000621325 APOC4-APOC2K7ER74 178 aa22.24■■□□□ 1.15
LIME1-210ENST00000621325 DPYSL4O14531 572 aa22.24■■□□□ 1.15
LIME1-210ENST00000621325 APOC2P02655 101 aa22.24■■□□□ 1.15
LIME1-210ENST00000621325 SDC4P31431 198 aa22.24■■□□□ 1.15
LIME1-210ENST00000621325 PNPLA4P41247 253 aa22.24■■□□□ 1.15
LIME1-210ENST00000621325 MAGEA4P43358 317 aa22.24■■□□□ 1.15
LIME1-210ENST00000621325 CA9Q16790 459 aa22.24■■□□□ 1.15
LIME1-210ENST00000621325 TTC13Q8NBP0 860 aa22.24■■□□□ 1.15
LIME1-210ENST00000621325 STK32AQ8WU08 396 aa22.24■■□□□ 1.15
LIME1-210ENST00000621325 ROPN1BQ9BZX4 212 aaPredicted RBP22.24■■□□□ 1.15
LIME1-210ENST00000621325 FAM107BQ9H098 131 aa22.24■■□□□ 1.15
LIME1-210ENST00000621325 ROPN1Q9HAT0 212 aaPredicted RBP22.24■■□□□ 1.15
LIME1-210ENST00000621325 RARBP10826 455 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 ACAT1P24752 427 aaKnown RBP22.23■■□□□ 1.15
LIME1-210ENST00000621325 MMP13P45452 471 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 FLT3LGP49771 235 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 EIF3EP60228 445 aaKnown RBP22.23■■□□□ 1.15
LIME1-210ENST00000621325 BST2Q10589 180 aaKnown RBP22.23■■□□□ 1.15
LIME1-210ENST00000621325 SV2CQ496J9 727 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 MFSD5Q6N075 450 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 NLRP14Q86W24 1093 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 RELL1Q8IUW5 271 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 GOLGA8MH3BSY2 632 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 HUS1O60921 280 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 CHRNA1P02708 482 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 IL4RP24394 825 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 ATXN1P54253 815 aaKnown RBP22.23■■□□□ 1.15
LIME1-210ENST00000621325 HDAC4P56524 1084 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 CAP1Q01518 475 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 CROCCP2Q86T23 111 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 FAM71DQ8N9W8 422 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 GSTCDQ8NEC7 633 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 SPATA18Q8TC71 538 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 LPPQ93052 612 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 PPP1R10Q96QC0 940 aaKnown RBP22.23■■□□□ 1.15
LIME1-210ENST00000621325 SCN10AQ9Y5Y9 1956 aa22.23■■□□□ 1.15
LIME1-210ENST00000621325 RPL22P35268 128 aaKnown RBP22.22■■□□□ 1.15
LIME1-210ENST00000621325 BCAT1P54687 386 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 SREBF2Q12772 1141 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 ANKRD22Q5VYY1 191 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 MYCBPAPQ8TBZ2 947 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 CCT8L2Q96SF2 557 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 TRPV2Q9Y5S1 764 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.22■■□□□ 1.15
LIME1-210ENST00000621325 M0QZ92 97 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 CA12O43570 354 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 BANF1O75531 89 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 RBP3P10745 1247 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 CHN1P15882 459 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 MLH1P40692 756 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 KRT81Q14533 505 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 MORF4L2Q15014 288 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 EXOC3L1Q86VI1 746 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 ZC3H18Q86VM9 953 aaKnown RBP22.22■■□□□ 1.15
LIME1-210ENST00000621325 RSAD2Q8WXG1 361 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 NDRG1Q92597 394 aaKnown RBP22.22■■□□□ 1.15
LIME1-210ENST00000621325 PRCCQ92733 491 aaPredicted RBP22.22■■□□□ 1.15
LIME1-210ENST00000621325 GAD1Q99259 594 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 SNRNP25Q9BV90 132 aaKnown RBP22.22■■□□□ 1.15
LIME1-210ENST00000621325 MAK16Q9BXY0 300 aaKnown RBP22.22■■□□□ 1.15
LIME1-210ENST00000621325 MAGEB5Q9BZ81 275 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 TLL2Q9Y6L7 1015 aa22.22■■□□□ 1.15
LIME1-210ENST00000621325 DCAF8L1A6NGE4 600 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 CLDN5O00501 218 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 CREB1P16220 341 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 CTCFP49711 727 aaPredicted RBP22.21■■□□□ 1.15
LIME1-210ENST00000621325 MFSD14CQ5VZR4 134 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 WSCD1Q658N2 575 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 C1orf228Q6PIY5 440 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 SERPINB12Q96P63 405 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 CNOT10Q9H9A5 744 aaKnown RBP22.21■■□□□ 1.15
LIME1-210ENST00000621325 FAM105AQ9NUU6 356 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 ABT1Q9ULW3 272 aaKnown RBP22.21■■□□□ 1.15
LIME1-210ENST00000621325 HTTP42858 3142 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 CYB561D2O14569 222 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 PPP1R12AO14974 1030 aaPredicted RBP22.21■■□□□ 1.15
LIME1-210ENST00000621325 TRAPPC3O43617 180 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 FCGRTP55899 365 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 CYP4X1Q8N118 509 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 MICALL1Q8N3F8 863 aa22.21■■□□□ 1.15
LIME1-210ENST00000621325 B3GALNT2Q8NCR0 500 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms