RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 USP3Q9Y6I4 520 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 BDP1A6H8Y1 2624 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 MYOFQ9NZM1 2061 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 TTC28Q96AY4 2481 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 PAPSS1O43252 624 aaPredicted RBP14.36□□□□□ -0.11
NEK3-210ENST00000620675 MBTPS2O43462 519 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 F11P03951 625 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 CEBPBP17676 345 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 TNFAIP3P21580 790 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 YWHAQP27348 245 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 RPL34P49207 117 aaKnown RBP14.36□□□□□ -0.11
NEK3-210ENST00000620675 CBX2Q14781 532 aaPredicted RBP14.36□□□□□ -0.11
NEK3-210ENST00000620675 TAF5Q15542 800 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 PRSS36Q5K4E3 855 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 RTL10Q7L3V2 364 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 ELMOD1Q8N336 334 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 SUSD6Q92537 303 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 PPP1R13BQ96KQ4 1090 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 MYRFLQ96LU7 910 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 PNPLA8Q9NP80 782 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 ASAH2Q9NR71 780 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 ASB3Q9Y575 518 aa14.36□□□□□ -0.11
NEK3-210ENST00000620675 FAM92AA1XBS5 289 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 KCNQ1P51787 676 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 EPHA5P54756 1037 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 SLC8A3P57103 927 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 ITIH3Q06033 890 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 PTP4A2Q12974 167 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 MTF1Q14872 753 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 TAF12Q16514 161 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 ASTE1Q2TB18 679 aaPredicted RBP14.35□□□□□ -0.11
NEK3-210ENST00000620675 SMYD5Q6GMV2 418 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 ELMSAN1Q6PJG2 1045 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 MMS22LQ6ZRQ5 1243 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 CCDC186Q7Z3E2 898 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 SCD5Q86SK9 330 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 ITIH5Q86UX2 942 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 TMEM139Q8IV31 216 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 TMEM35BQ8NCS4 154 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 KCTD13Q8WZ19 329 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 FBXO32Q969P5 355 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 TRMT2BQ96GJ1 504 aaKnown RBP14.35□□□□□ -0.11
NEK3-210ENST00000620675 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.35□□□□□ -0.11
NEK3-210ENST00000620675 UBXN6Q9BZV1 441 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 LRRC4Q9HBW1 653 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 WDR6Q9NNW5 1121 aaKnown RBP14.35□□□□□ -0.11
NEK3-210ENST00000620675 NUDT5Q9UKK9 219 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 NUP210Q8TEM1 1887 aaPredicted RBP14.35□□□□□ -0.11
NEK3-210ENST00000620675 C2orf78A6NCI8 922 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 YJEFN3A6XGL0 299 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 E7ENQ6 273 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 GJB6O95452 261 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 POU2F2P09086 479 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 CCDC172P0C7W6 258 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 GFPT1Q06210 699 aaPredicted RBP14.35□□□□□ -0.11
NEK3-210ENST00000620675 TEAD2Q15562 447 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 CES5AQ6NT32 575 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 TMEM110Q86TL2 294 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 HSFY1Q96LI6 401 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 ZSWIM3Q96MP5 696 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 SLC22A12Q96S37 553 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 C11orf70Q9BRQ4 267 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 SPTLC3Q9NUV7 552 aa14.35□□□□□ -0.11
NEK3-210ENST00000620675 CLUHO75153 1309 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 A0A1W2PQH9 124 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 ZNF263O14978 683 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 ZBED1O96006 694 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 ABL1P00519 1130 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 IL9P15248 144 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 DAOAP59103 153 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 CENPCQ03188 943 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 ATAT1Q5SQI0 421 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 TXNDC8Q6A555 127 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 FAM183BPQ6ZVS7 135 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 PDZD4Q76G19 769 aaPredicted RBP14.34□□□□□ -0.11
NEK3-210ENST00000620675 GET4Q7L5D6 327 aaPredicted RBP14.34□□□□□ -0.11
NEK3-210ENST00000620675 STK32AQ8WU08 396 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 NHEJ1Q9H9Q4 299 aaPredicted RBP14.34□□□□□ -0.11
NEK3-210ENST00000620675 IMPACTQ9P2X3 320 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 SCML2Q9UQR0 700 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 SOWAHDA6NJG2 315 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 ATMINO43313 823 aaPredicted RBP14.34□□□□□ -0.11
NEK3-210ENST00000620675 RTN3O95197 1032 aaPredicted RBP14.34□□□□□ -0.11
NEK3-210ENST00000620675 LSM8O95777 96 aaKnown RBP14.34□□□□□ -0.11
NEK3-210ENST00000620675 TBX18O95935 607 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 SMAD4Q13485 552 aaKnown RBP14.34□□□□□ -0.11
NEK3-210ENST00000620675 PM20D1Q6GTS8 502 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 ERICH1Q86X53 443 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 SIX6OS1Q8N1H7 587 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 PANX2Q96RD6 677 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 MYADMQ96S97 322 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 CYP2S1Q96SQ9 504 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 ATXN3LQ9H3M9 355 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 CCSER2Q9H7U1 834 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 NENFQ9UMX5 172 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 MRPS23Q9Y3D9 190 aaKnown RBP14.34□□□□□ -0.11
NEK3-210ENST00000620675 CEP83Q9Y592 693 aa14.34□□□□□ -0.11
NEK3-210ENST00000620675 ZNF840PA6NDX5 716 aa14.33□□□□□ -0.12
NEK3-210ENST00000620675 GRAP2O75791 330 aa14.33□□□□□ -0.12
NEK3-210ENST00000620675 MMP8P22894 467 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms