RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 SKA2Q8WVK7 121 aaPredicted RBP14.42□□□□□ -0.1
CNOT3-210ENST00000618939 CDY2AQ9Y6F7 541 aa14.42□□□□□ -0.1
CNOT3-210ENST00000618939 CDY1Q9Y6F8 540 aa14.42□□□□□ -0.1
CNOT3-210ENST00000618939 H3BRB1 525 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 CYP2F1P24903 491 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 PTPN4P29074 926 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 ACAP1Q15027 740 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 RCN1Q15293 331 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 KIAA1841Q6NSI8 718 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 TTC27Q6P3X3 843 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 ALLCQ8N6M5 410 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 ICA1LQ8NDH6 482 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 UBXN6Q9BZV1 441 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 TUT1Q9H6E5 874 aaKnown RBP14.41□□□□□ -0.1
CNOT3-210ENST00000618939 MRPL40Q9NQ50 206 aaKnown RBP14.41□□□□□ -0.1
CNOT3-210ENST00000618939 CCL15-CCL14A0A0B4J2E2 113 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 PSMD3O43242 534 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 APOEP02649 317 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 HMGCRP04035 888 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 ABHD2P08910 425 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 TGM2P21980 687 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 PCSK1P29120 753 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 EPHB2P29323 1055 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 TNFSF9P41273 254 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 ESRRGP62508 458 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 EFTUD2Q15029 972 aaKnown RBP eCLIP14.41□□□□□ -0.11e-6■■■■■ 27.5
CNOT3-210ENST00000618939 CCL15Q16663 113 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 LRRC36Q1X8D7 754 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 PDZD8Q8NEN9 1154 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 ZNF75CPQ92670 426 aaPredicted RBP14.41□□□□□ -0.1
CNOT3-210ENST00000618939 PTPRN2Q92932 1015 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 KCNK16Q96T55 309 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 SLC38A7Q9NVC3 462 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 DDIT4Q9NX09 232 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 VHLP40337 213 aa14.41□□□□□ -0.1
CNOT3-210ENST00000618939 FHDC1Q9C0D6 1143 aaPredicted RBP14.41□□□□□ -0.1
CNOT3-210ENST00000618939 ROBO1Q9Y6N7 1651 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 ASS1P00966 412 aaKnown RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 CALB2P22676 271 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 ELF3P78545 371 aaPredicted RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 DAW1Q8N136 415 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 WRAP73Q9P2S5 460 aaPredicted RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 MYH6P13533 1939 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 TRPM3Q9HCF6 1732 aaPredicted RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 AQP5P55064 265 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 YWHAHQ04917 246 aaPredicted RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 CACNB2Q08289 660 aaPredicted RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 DCLRE1BQ9H816 532 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 SUN2Q9UH99 717 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 NOCTQ9UK39 431 aaKnown RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 R3HDM2Q9Y2K5 976 aaKnown RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 L3MBTL1Q9Y468 752 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 RIPK3Q9Y572 518 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 IQCA1LA6NCM1 817 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 E5RJQ4 531 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 RPA3P35244 121 aaPredicted RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 HADHBP55084 474 aaKnown RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 DPYSL3Q14195 570 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 RASA2Q15283 850 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 NAPEPLDQ6IQ20 393 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 TEX9Q8N6V9 391 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 APOPT1Q96IL0 206 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 KATNAL1Q9BW62 490 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 SLC39A10Q9ULF5 831 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 STXBP5LQ9Y2K9 1186 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 ADAMTSL3P82987 1691 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 MAFO75444 373 aaPredicted RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 C6orf222P0C671 652 aaPredicted RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 TBCCQ15814 346 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 RARS2Q5T160 578 aaKnown RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 TRIML2Q8N7C3 387 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 TMEM237Q96Q45 408 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 PARK7Q99497 189 aaKnown RBP14.4□□□□□ -0.1
CNOT3-210ENST00000618939 MYLK2Q9H1R3 596 aa14.4□□□□□ -0.1
CNOT3-210ENST00000618939 hCG_1818297A0A087WSY0 165 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 KIF1CO43896 1103 aaKnown RBP14.39□□□□□ -0.11
CNOT3-210ENST00000618939 ZNF286BP0CG31 522 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 MRPS35P82673 323 aaKnown RBP14.39□□□□□ -0.11
CNOT3-210ENST00000618939 FAAP100Q0VG06 881 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 BST2Q10589 180 aaKnown RBP14.39□□□□□ -0.11
CNOT3-210ENST00000618939 IPMKQ8NFU5 416 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 SHCBP1LQ9BZQ2 653 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 TRPV6Q9H1D0 765 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 ENO3P13929 434 aaPredicted RBP14.39□□□□□ -0.11
CNOT3-210ENST00000618939 ABHD15Q6UXT9 468 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 CLEC4DQ8WXI8 215 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 ASCC2Q9H1I8 757 aaPredicted RBP14.39□□□□□ -0.11
CNOT3-210ENST00000618939 NSMCE4AQ9NXX6 385 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 FAF1Q9UNN5 650 aaPredicted RBP14.39□□□□□ -0.11
CNOT3-210ENST00000618939 A0A0B4J269 797 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 AIM2O14862 343 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 CETPP11597 493 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 RPL22P35268 128 aaKnown RBP14.39□□□□□ -0.11
CNOT3-210ENST00000618939 GRIK1P39086 918 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 COPAP53621 1224 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 MAPRE2Q15555 327 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 FBXO47Q5MNV8 452 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 BBS12Q6ZW61 710 aa14.39□□□□□ -0.11
CNOT3-210ENST00000618939 SPATA2LQ8IUW3 424 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms