RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 ASRGL1Q7L266 308 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 CYP4X1Q8N118 509 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 B4GALNT2Q8NHY0 566 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 CEP41Q9BYV8 373 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 PDZD7Q9H5P4 517 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 SLCO1B3Q9NPD5 702 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 TSPAN16Q9UKR8 245 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 GDF10P55107 478 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 ACVR2BQ13705 512 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 CTU1Q7Z7A3 348 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 ANKLE1Q8NAG6 615 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 STK32AQ8WU08 396 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 TRIM11Q96F44 468 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 MRPL45Q9BRJ2 306 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 FZD8Q9H461 694 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 PCYOX1Q9UHG3 505 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 ZNF646O15015 1829 aaPredicted RBP15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 A8MXQ7 604 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 PDIA2Q13087 525 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 MTHFD1LQ6UB35 978 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 ILDR2Q71H61 639 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 PLPPR4Q7Z2D5 763 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 CLEC4CQ8WTT0 213 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 PTPN18Q99952 460 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 MED10Q9BTT4 135 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 DPEP3Q9H4B8 488 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 TXLNGQ9NUQ3 528 aa15.11■□□□□ 0.01
SHROOM1-208ENST00000617339 ANKRD33BA6NCL7 494 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 CALB1P05937 261 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 TPBGLP0DKB5 382 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 HSPA6P17066 643 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 SP100P23497 879 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 ROR2Q01974 943 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 MOGSQ13724 837 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 SPOCD1Q6ZMY3 1216 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 TSHZ1Q6ZSZ6 1077 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 TEX9Q8N6V9 391 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 DDX50Q9BQ39 737 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 PRMT7Q9NVM4 692 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 NEU2Q9Y3R4 380 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 CCDC130P13994 396 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 PPP2R5EQ16537 467 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 ZC3H12AQ5D1E8 599 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 PLEKHA7Q6IQ23 1121 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 ZNF677Q86XU0 584 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 SLC4A11Q8NBS3 891 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 PHC3Q8NDX5 983 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 CKAP2Q8WWK9 683 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 TMEM176AQ96HP8 235 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 FAM81BQ96LP2 452 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 ZMAT2Q96NC0 199 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 LIN7AO14910 233 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 TREHO43280 583 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 FAM189A1O60320 539 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 TJP3O95049 919 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 RTN3O95197 1032 aaPredicted RBP15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 MIPP30301 263 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 FOXN2P32314 431 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 MRPS35P82673 323 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 KRT81Q14533 505 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 MFN1Q8IWA4 741 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 ZFP42Q96MM3 310 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 TBC1D10AQ9BXI6 508 aa15.1■□□□□ 0.01
SHROOM1-208ENST00000617339 AVILO75366 819 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 TRPA1O75762 1119 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 DESP17661 470 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 ATP6V1C1P21283 382 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 ALDH3A1P30838 453 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 SLC1A1P43005 524 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 GOLGA7BQ2TAP0 167 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 PPP1R26Q5T8A7 1209 aaPredicted RBP15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 DARS2Q6PI48 645 aaKnown RBP15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 HASPINQ8TF76 798 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 RXFP2Q8WXD0 754 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 SLITRK1Q96PX8 696 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 LRRC37BQ96QE4 947 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 TINF2Q9BSI4 451 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 CCDC134Q9H6E4 229 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 DNAJC25-GNG10A0A024R161 153 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 UBTFL6P0CB48 400 aaPredicted RBP15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 GNAZP19086 355 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 TFE3P19532 575 aaPredicted RBP15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 LMO2P25791 158 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 SSTR1P30872 391 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 ARPP19P56211 112 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 DGKDQ16760 1214 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 ZNF354CQ86Y25 554 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 AAASQ9NRG9 546 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 TTLL3Q9Y4R7 772 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 EXOC1LA0A1B0GW35 172 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 MEIS3P2A8K0S8 358 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 I3L4J1 428 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 LRCH4O75427 683 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 RARGP13631 454 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 C1QBPQ07021 282 aaKnown RBP15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 PTP4A2Q12974 167 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 RFWD3Q6PCD5 774 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 CXCL17Q6UXB2 119 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 ADAM32Q8TC27 787 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms