RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SNTG2Q9NY99 539 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 SCOCQ9UIL1 159 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 CHKBQ9Y259 395 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 NVLO15381 856 aaKnown RBP17.23■□□□□ 0.35
CNOT3-208ENST00000613073 CILPO75339 1184 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 FOXN2P32314 431 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 CDH5P33151 784 aaPredicted RBP17.23■□□□□ 0.35
CNOT3-208ENST00000613073 ERFP50548 548 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 CCL14Q16627 93 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 RFWD3Q6PCD5 774 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 MFSD7Q6UXD7 560 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.23■□□□□ 0.357e-6■■■■□ 20.7
CNOT3-208ENST00000613073 TMEM176AQ96HP8 235 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 EIF2AQ9BY44 585 aaKnown RBP17.23■□□□□ 0.35
CNOT3-208ENST00000613073 SLCO1B3Q9NPD5 702 aa17.23■□□□□ 0.35
CNOT3-208ENST00000613073 MED7O43513 233 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 SMIM10L2AP0DMW4 78 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 SMIM10L2BP0DMW5 78 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 KRT3P12035 628 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 RARGP13631 454 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 ACADSP16219 412 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 SMTNL2Q2TAL5 461 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 TNFAIP8L3Q5GJ75 292 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 GLRA4Q5JXX5 417 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 CATSPER4Q7RTX7 472 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 DTX3LQ8TDB6 740 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 ZFAND2BQ8WV99 257 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 MAIP1Q8WWC4 291 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 ART4Q93070 314 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 HAUS1Q96CS2 278 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 PWWP2AQ96N64 755 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 FAM210AQ96ND0 272 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 LRMDAQ9H2I8 198 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 PARP2Q9UGN5 583 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 RPS6KL1Q9Y6S9 549 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 CITO14578 2027 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 SLC15A5A6NIM6 579 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 M0QYV0 167 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 MICAL2O94851 1124 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 HOXA11P31270 313 aaPredicted RBP17.22■□□□□ 0.35
CNOT3-208ENST00000613073 MAN1A1P33908 653 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 SCNN1BP51168 640 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 OLFML2BQ68BL8 750 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 FAM81AQ8TBF8 368 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 LRRC8CQ8TDW0 803 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 ANKRD27Q96NW4 1050 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 LRRC37BQ96QE4 947 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 APOL6Q9BWW8 343 aa17.22■□□□□ 0.35
CNOT3-208ENST00000613073 ERBB2P04626 1255 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 UBTFL6P0CB48 400 aaPredicted RBP17.21■□□□□ 0.35
CNOT3-208ENST00000613073 PSMA2P25787 234 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 ADCY8P40145 1251 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 PSMC4P43686 418 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 NDST1P52848 882 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 HIC1Q14526 733 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 MTFR1Q15390 333 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 KHDC1Q4VXA5 237 aaKnown RBP17.21■□□□□ 0.35
CNOT3-208ENST00000613073 KCNT1Q5JUK3 1230 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 RNF43Q68DV7 783 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 ATL2Q8NHH9 583 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 SLITRK1Q96PX8 696 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 ADAMTS10Q9H324 1103 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 ZWILCHQ9H900 591 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 ZSWIM8A7E2V4 1837 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 PPEF2O14830 753 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 TP73O15350 636 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 HOXD8P13378 290 aaPredicted RBP17.21■□□□□ 0.35
CNOT3-208ENST00000613073 CHKAP35790 457 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 ZNF200P98182 395 aaPredicted RBP17.21■□□□□ 0.35
CNOT3-208ENST00000613073 KYNUQ16719 465 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 TLK2Q86UE8 772 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 ZNF410Q86VK4 478 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 C12orf29Q8N999 325 aa17.21■□□□□ 0.35
CNOT3-208ENST00000613073 ZMAT2Q96NC0 199 aaKnown RBP17.21■□□□□ 0.35
CNOT3-208ENST00000613073 SPAG7O75391 227 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 GAS8O95995 478 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 CYP2C9P11712 490 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 P4HA1P13674 534 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 TAC1P20366 129 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 CYP2B6P20813 491 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 ATICP31939 592 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 CACNA2D1P54289 1103 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 RBP5P82980 135 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 BEX3Q00994 111 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 GSTA5Q7RTV2 222 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 AGGF1Q8N302 714 aaeCLIP17.2■□□□□ 0.34
CNOT3-208ENST00000613073 ADAM33Q9BZ11 813 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 LHX5Q9H2C1 402 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 NKIRAS1Q9NYS0 192 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.2■□□□□ 0.34
CNOT3-208ENST00000613073 A6NJR5 290 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 ZCCHC18P0CG32 403 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 SKIV2L2P42285 1042 aaKnown RBP17.2■□□□□ 0.34
CNOT3-208ENST00000613073 PIGHQ14442 188 aaPredicted RBP17.2■□□□□ 0.34
CNOT3-208ENST00000613073 RCN1Q15293 331 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 MFSD5Q6N075 450 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 CROCCP2Q86T23 111 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 RCOR2Q8IZ40 523 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 DNAJB3Q8WWF6 145 aa17.2■□□□□ 0.34
CNOT3-208ENST00000613073 SLCO2A1Q92959 643 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms