RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 KLHL7Q8IXQ5 586 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 RCOR2Q8IZ40 523 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 EMC1Q8N766 993 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 CCDC26Q8TAB7 109 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 MYCBPAPQ8TBZ2 947 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 DIS3LQ8TF46 1054 aaKnown RBP9.36□□□□□ -0.91
CCDC47-207ENST00000612558 HASPINQ8TF76 798 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 HNRNPLLQ8WVV9 542 aaKnown RBP9.36□□□□□ -0.91
CCDC47-207ENST00000612558 MAIP1Q8WWC4 291 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 IRF7Q92985 503 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 CASD1Q96PB1 797 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 CNPY3Q9BT09 278 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 PPP1R12CQ9BZL4 782 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 TMEM39AQ9NV64 488 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 ASNSD1Q9NWL6 643 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 STIM2Q9P246 746 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 TBX21Q9UL17 535 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 MTUS1Q9ULD2 1270 aa9.36□□□□□ -0.91
CCDC47-207ENST00000612558 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-207ENST00000612558 MYBPHLA2RUH7 354 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 C2CD4BA6NLJ0 364 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 I3L4J1 428 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 CLDN5O00501 218 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 CAPN5O15484 640 aaPredicted RBP9.35□□□□□ -0.91
CCDC47-207ENST00000612558 TRAPPC3O43617 180 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 ERLIN1O75477 346 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 RNF8O76064 485 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 ITGB1P05556 798 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 KRT7P08729 469 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 FAM200BP0CF97 657 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 PDGFRAP16234 1089 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 GPD1P21695 349 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 OR1G1P47890 313 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 VSNL1P62760 191 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 MAPRE1Q15691 268 aaKnown RBP9.35□□□□□ -0.91
CCDC47-207ENST00000612558 TCTN1Q2MV58 587 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 OVOS1Q6IE37 1185 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 FAM171BQ6P995 826 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 TMCO3Q6UWJ1 677 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 MAATS1Q7Z4T9 603 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 POLNQ7Z5Q5 900 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 ADAT2Q7Z6V5 191 aaKnown RBP9.35□□□□□ -0.91
CCDC47-207ENST00000612558 PIGZQ86VD9 579 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 HDAC7Q8WUI4 952 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 RXFP2Q8WXD0 754 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 KCTD13Q8WZ19 329 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 PCED1BQ96HM7 432 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 RBM41Q96IZ5 413 aaKnown RBP9.35□□□□□ -0.91
CCDC47-207ENST00000612558 RTP3Q9BQQ7 232 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 B3GNT5Q9BYG0 378 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 UBXN6Q9BZV1 441 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 DDX47Q9H0S4 455 aaKnown RBP9.35□□□□□ -0.91
CCDC47-207ENST00000612558 C11orf49Q9H6J7 331 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 ARFGAP3Q9NP61 516 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 DDX56Q9NY93 547 aaKnown RBP9.35□□□□□ -0.91
CCDC47-207ENST00000612558 DMGDHQ9UI17 866 aaKnown RBP9.35□□□□□ -0.91
CCDC47-207ENST00000612558 ATP11BQ9Y2G3 1177 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 NR2E1Q9Y466 385 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 TANC1Q9C0D5 1861 aa9.35□□□□□ -0.91
CCDC47-207ENST00000612558 RAD51CO43502 376 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 B4GALT3O60512 393 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 LRCH4O75427 683 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 TADA2AO75478 443 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 ALDH2P05091 517 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 CLTBP09497 229 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 LCP1P13796 627 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 TCF4P15884 667 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 DESP17661 470 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 CHRNA3P32297 505 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 RFC2P35250 354 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 PCK1P35558 622 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 FLT3P36888 993 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 LBX1P52954 281 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 SLC7A5Q01650 507 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 YWHAHQ04917 246 aaPredicted RBP9.34□□□□□ -0.91
CCDC47-207ENST00000612558 IKBKEQ14164 716 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 ODF2Q5BJF6 829 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 INTS6LQ5JSJ4 861 aaKnown RBP9.34□□□□□ -0.91
CCDC47-207ENST00000612558 EFHC1Q5JVL4 640 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 CCNI2Q6ZMN8 369 aaPredicted RBP9.34□□□□□ -0.91
CCDC47-207ENST00000612558 CLEC20AQ6ZU45 233 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 SLC26A9Q7LBE3 791 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 DEFB128Q7Z7B8 93 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 FAM35AQ86V20 835 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 NPAS4Q8IUM7 802 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 CCDC50Q8IVM0 306 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 IFT20Q8IY31 132 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 ARFGAP1Q8N6T3 406 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 PAWRQ96IZ0 340 aaKnown RBP9.34□□□□□ -0.91
CCDC47-207ENST00000612558 PIWIL1Q96J94 861 aaKnown RBP9.34□□□□□ -0.91
CCDC47-207ENST00000612558 NCAPGQ9BPX3 1015 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 COLEC11Q9BWP8 271 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 MRPL9Q9BYD2 267 aaKnown RBP9.34□□□□□ -0.91
CCDC47-207ENST00000612558 NRDE2Q9H7Z3 1164 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 LRRC4Q9HBW1 653 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 KRT82Q9NSB4 513 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 DNAJB4Q9UDY4 337 aa9.34□□□□□ -0.91
CCDC47-207ENST00000612558 F8W810 466 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 NRP1O14786 923 aa9.33□□□□□ -0.92
CCDC47-207ENST00000612558 SYN3O14994 580 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms