RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 ELK3P41970 407 aa9.81□□□□□ -0.84
SRGAP2B-204ENST00000612199 CLCN3P51790 818 aa9.81□□□□□ -0.84
SRGAP2B-204ENST00000612199 TP53BP2Q13625 1128 aa9.81□□□□□ -0.84
SRGAP2B-204ENST00000612199 P3H1Q32P28 736 aa9.81□□□□□ -0.84
SRGAP2B-204ENST00000612199 ZFPM1Q8IX07 1006 aa9.81□□□□□ -0.84
SRGAP2B-204ENST00000612199 USP38Q8NB14 1042 aa9.81□□□□□ -0.84
SRGAP2B-204ENST00000612199 ELMO3Q96BJ8 720 aa9.81□□□□□ -0.84
SRGAP2B-204ENST00000612199 KIFC1Q9BW19 673 aa9.81□□□□□ -0.84
SRGAP2B-204ENST00000612199 TSSK1BQ9BXA7 367 aa9.81□□□□□ -0.84
SRGAP2B-204ENST00000612199 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.81□□□□□ -0.84
SRGAP2B-204ENST00000612199 SPATA31D1Q6ZQQ2 1576 aa9.81□□□□□ -0.84
SRGAP2B-204ENST00000612199 OR7A10O76100 309 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 SERPINB3P29508 390 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 ERVK-24P63145 666 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 ACTN3Q08043 901 aaPredicted RBP9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 MORF4L2Q15014 288 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 SGO1Q5FBB7 561 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 C16orf87Q6PH81 154 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 ZNF677Q86XU0 584 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 SHCBP1Q8NEM2 672 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 RIN3Q8TB24 985 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 TMEM8AQ9HCN3 771 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 DIABLOQ9NR28 239 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 GTF3C4Q9UKN8 822 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 DEPDC5O75140 1603 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 B2RBV5 119 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 AP5Z1O43299 807 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 CTSEP14091 401 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 UAP1L1Q3KQV9 507 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 HLA-DQA1Q5Y7H0 255 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 USP33Q8TEY7 942 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 FAM129AQ9BZQ8 928 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 ING2Q9H160 280 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 TRABDQ9H4I3 376 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 C17orf75Q9HAS0 396 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 LSM7Q9UK45 103 aaKnown RBP9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 SLC39A10Q9ULF5 831 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 ARL2BPQ9Y2Y0 163 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 PPLO60437 1756 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 FOXN3O00409 490 aaPredicted RBP9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 APOL1O14791 398 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 MAGEB2O15479 319 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 LSP1P33241 339 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 ERFP50548 548 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 BACE1P56817 501 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 NFKB2Q00653 900 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 GRIK5Q16478 980 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 AGBL2Q5U5Z8 902 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 MTSS1LQ765P7 747 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 RPAINQ86UA6 219 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 REXO1L1PQ8IX06 675 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 SCAIQ8N9R8 606 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 SEMA6BQ9H3T3 888 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 MANSC1Q9H8J5 431 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 ZFATQ9P243 1243 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 BCL9O00512 1426 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 PHF20L1A8MW92 1017 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 RNASEH1O60930 286 aaKnown RBP9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 RPS12P25398 132 aaKnown RBP9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 SHMT1P34896 483 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 SULT1E1P49888 294 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 PIGHQ14442 188 aaPredicted RBP9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 SPATA21Q7Z572 469 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 FBXL16Q8N461 479 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 CHKBQ9Y259 395 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 MAP3K6O95382 1288 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 DNAJB2P25686 324 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 C21orf59P57076 290 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 MTHFD1LQ6UB35 978 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 FBXO16Q8IX29 292 aaPredicted RBP9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 PGBD4Q96DM1 585 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 PARK7Q99497 189 aaKnown RBP9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 TBC1D10AQ9BXI6 508 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 ROPN1BQ9BZX4 212 aaPredicted RBP9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 THAP2Q9H0W7 228 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 ROPN1Q9HAT0 212 aaPredicted RBP9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 RAB6BQ9NRW1 208 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 KBTBD4Q9NVX7 518 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 SPASTQ9UBP0 616 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 IPPQ9Y573 584 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 AP3B1O00203 1094 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 RAD51CO43502 376 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 ITGB3P05106 788 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 MUTP22033 750 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 CDK17Q00537 523 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 MMRN1Q13201 1228 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 PDAP1Q13442 181 aaKnown RBP9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 TAF5Q15542 800 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 LONRF1Q17RB8 773 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 MTBPQ96DY7 904 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 CLCC1Q96S66 551 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 ISCUQ9H1K1 167 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 SMYD3Q9H7B4 428 aa9.8□□□□□ -0.84
SRGAP2B-204ENST00000612199 EIF3HO15372 352 aaKnown RBP eCLIP9.79□□□□□ -0.84
SRGAP2B-204ENST00000612199 CCR4P51679 360 aa9.79□□□□□ -0.84
SRGAP2B-204ENST00000612199 C1orf146Q5VVC0 180 aa9.79□□□□□ -0.84
SRGAP2B-204ENST00000612199 BBS7Q8IWZ6 715 aa9.79□□□□□ -0.84
SRGAP2B-204ENST00000612199 CHST13Q8NET6 341 aa9.79□□□□□ -0.84
SRGAP2B-204ENST00000612199 ELMO2Q96JJ3 720 aa9.79□□□□□ -0.84
SRGAP2B-204ENST00000612199 ERP44Q9BS26 406 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms