RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 DCAF4L1Q3SXM0 396 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 DCAF6Q58WW2 860 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 MICALL2Q8IY33 904 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 SLC10A4Q96EP9 437 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 SLITRK1Q96PX8 696 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 HSD17B14Q9BPX1 270 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 TMEM109Q9BVC6 243 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 GID8Q9NWU2 228 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 LRRC37A3O60309 1634 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 CAMTA1Q9Y6Y1 1673 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 E2F8A0AVK6 867 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 C16orf96A6NNT2 1141 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 ANKRD63C9JTQ0 380 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 TRDMT1O14717 391 aaKnown RBP11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 GH1P01241 217 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 PDGFRBP09619 1106 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 CHKAP35790 457 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 PNPLA4P41247 253 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 NCALDP61601 193 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 CCDC15Q0P6D6 951 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 SLC15A2Q16348 729 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 GRIK5Q16478 980 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 SCN4BQ8IWT1 228 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 EMC1Q8N766 993 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 SHCBP1LQ9BZQ2 653 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 FAM192AQ9GZU8 254 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 SPATA31A6Q5VVP1 1343 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 E5RI56 91 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 DGKIO75912 1065 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 SNUPNO95149 360 aaKnown RBP11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 PSMG1O95456 288 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 SERPINE1P05121 402 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 MAMLD1Q13495 774 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 IMPG1Q17R60 797 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 ALLCQ8N6M5 410 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 MCM8Q9UJA3 840 aa11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 PIN4Q9Y237 131 aaKnown RBP11.3□□□□□ -0.6
CDC42EP3-206ENST00000611976 ADRB2P07550 413 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 JAM2P57087 298 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 PDAP1Q13442 181 aaKnown RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 BMPR2Q13873 1038 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 RBBP7Q16576 425 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 PARP6Q2NL67 630 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 FASTKD5Q7L8L6 764 aaKnown RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 C12orf56Q8IXR9 622 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 ZNF526Q8TF50 670 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 RXFP2Q8WXD0 754 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 OTUD5Q96G74 571 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 CNBD2Q96M20 576 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 KIAA1683Q9H0B3 1180 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 TISP43B9A030 160 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 SEC24DO94855 1032 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 MOCS2O96007 188 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 CPA3P15088 417 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 TCN1P20061 433 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 AASDHQ4L235 1098 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 SEL1L3Q68CR1 1132 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 ZPBP2Q6X784 338 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 SLC7A14Q8TBB6 771 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 LRRC39Q96DD0 335 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 CCDC126Q96EE4 140 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 ZNF184Q99676 751 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 UBA6A0AVT1 1052 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 SKAP2O75563 359 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 PAEPP09466 180 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 MAP4P27816 1152 aaKnown RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 HOXA10P31260 410 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 GNL1P36915 607 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 ARPP19P56211 112 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 MGAT5Q09328 741 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 OLFML2BQ68BL8 750 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 BRSK2Q8IWQ3 736 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 WDR18Q9BV38 432 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 CCDC90BQ9GZT6 254 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 IRAK4Q9NWZ3 460 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 SORCS3Q9UPU3 1222 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 TNPO2O14787 897 aaKnown RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 RPS12P25398 132 aaKnown RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 SERPINB5P36952 375 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 INPP1P49441 399 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 RPL10AP62906 217 aaKnown RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 NAB1Q13506 487 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 CCDC153Q494R4 210 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 WLSQ5T9L3 541 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 ULK4Q96C45 1275 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 TLCD1Q96CP7 247 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 CEP19Q96LK0 163 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 FGFBP2Q9BYJ0 223 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 ERVK-5Q9HDB9 667 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 BLOC1S6Q9UL45 172 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 AP4E1Q9UPM8 1137 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 KDM3BQ7LBC6 1761 aa11.29□□□□□ -0.6
CDC42EP3-206ENST00000611976 RGPD1P0DJD0 1748 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 ANXA9O76027 345 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 ITGAVP06756 1048 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 SERPINB10P48595 397 aa11.28□□□□□ -0.6
CDC42EP3-206ENST00000611976 SLC1A6P48664 564 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms