RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 USP54Q70EL1 1684 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 IRS2Q9Y4H2 1338 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 SIGLEC16A6NMB1 481 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 POLBP06746 335 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 SERPINB9P50453 376 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 PAPOLAP51003 745 aaKnown RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 HIRAP54198 1017 aaPredicted RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 CPNE8Q86YQ8 564 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 C12orf29Q8N999 325 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 C20orf96Q9NUD7 363 aaPredicted RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 OPHN1O60890 802 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 ENO1P06733 434 aaKnown RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 HOXD10P28358 340 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 BMPR2Q13873 1038 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 ARID3BQ8IVW6 561 aaPredicted RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 TRIM56Q9BRZ2 755 aaKnown RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 RNPEPQ9H4A4 650 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 SLC40A1Q9NP59 571 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 DDX43Q9NXZ2 648 aaKnown RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 MAFBQ9Y5Q3 323 aaPredicted RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 PDE4DIPQ5VU43 2346 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 AMPD1P23109 780 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 OCRLQ01968 901 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 CNGA2Q16280 664 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 ZNF410Q86VK4 478 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 EDEM1Q92611 657 aa13.65□□□□□ -0.22
TCF3-220ENST00000611869 CCDC124Q96CT7 223 aaKnown RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 FRMD8Q9BZ67 464 aaPredicted RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 NOCTQ9UK39 431 aaKnown RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 R3HDM2Q9Y2K5 976 aaKnown RBP13.65□□□□□ -0.22
TCF3-220ENST00000611869 UPP2O95045 317 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 POMCP01189 267 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 CHRNB2P17787 502 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 TAC1P20366 129 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 ARL2P36404 184 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 CASP2P42575 452 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 DRG2P55039 364 aaKnown RBP13.64□□□□□ -0.23
TCF3-220ENST00000611869 ZNF235Q14590 738 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 PKN2Q16513 984 aaKnown RBP13.64□□□□□ -0.23
TCF3-220ENST00000611869 C1orf146Q5VVC0 180 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 TTC8Q8TAM2 541 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 SEPT5Q99719 369 aaPredicted RBP13.64□□□□□ -0.23
TCF3-220ENST00000611869 TJP2Q9UDY2 1190 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 SNCAIPQ9Y6H5 919 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 SPDYE5A6NIY4 337 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 EIF4E1BA6NMX2 242 aaKnown RBP13.64□□□□□ -0.23
TCF3-220ENST00000611869 IGF2BP3O00425 579 aaKnown RBP eCLIP13.64□□□□□ -0.23
TCF3-220ENST00000611869 USP10Q14694 798 aaKnown RBP13.64□□□□□ -0.23
TCF3-220ENST00000611869 CHI3L2Q15782 390 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 NPNTQ6UXI9 565 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 SCG3Q8WXD2 468 aaKnown RBP13.64□□□□□ -0.23
TCF3-220ENST00000611869 N4BP2L2Q92802 583 aaPredicted RBP13.64□□□□□ -0.23
TCF3-220ENST00000611869 NTPCRQ9BSD7 190 aaKnown RBP13.64□□□□□ -0.23
TCF3-220ENST00000611869 ZMYM2Q9UBW7 1377 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 PMPCBO75439 489 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 SETSIPP0DME0 302 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 MGAT5BQ3V5L5 792 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 ERMARDQ5T6L9 678 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 IQSEC1Q6DN90 963 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 DEFB106AQ8N104 65 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 JOSD2Q8TAC2 188 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 E2F7Q96AV8 911 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 PPWD1Q96BP3 646 aaKnown RBP13.64□□□□□ -0.23
TCF3-220ENST00000611869 GLT1D1Q96MS3 346 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 RRAGCQ9HB90 399 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 ANGPTL3Q9Y5C1 460 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 MRPL42Q9Y6G3 142 aaKnown RBP13.64□□□□□ -0.23
TCF3-220ENST00000611869 UBR2Q8IWV8 1755 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 ADGRA3Q8IWK6 1321 aa13.64□□□□□ -0.23
TCF3-220ENST00000611869 APOC4-APOC2K7ER74 178 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 LIASO43766 372 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 APOC2P02655 101 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 MMP8P22894 467 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 PSEN2P49810 448 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 SLC6A3Q01959 620 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 LRRN4Q8WUT4 740 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 UBA6A0AVT1 1052 aaPredicted RBP13.63□□□□□ -0.23
TCF3-220ENST00000611869 SH3BP5O60239 455 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 ODC1P11926 461 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 RBL1P28749 1068 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 CPA2P48052 419 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 TSTA3Q13630 321 aaPredicted RBP13.63□□□□□ -0.23
TCF3-220ENST00000611869 AUHQ13825 339 aaKnown RBP13.63□□□□□ -0.23
TCF3-220ENST00000611869 PTPN20Q4JDL3 420 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 SLC25A41Q8N5S1 370 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 MAGEB18Q96M61 343 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 TTC1Q99614 292 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 SYT15Q9BQS2 421 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 NIFKQ9BYG3 293 aaKnown RBP13.63□□□□□ -0.23
TCF3-220ENST00000611869 NUF2Q9BZD4 464 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 SARS2Q9NP81 518 aaKnown RBP13.63□□□□□ -0.23
TCF3-220ENST00000611869 KBTBD13C9JR72 458 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 GPR182O15218 404 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 CCDC22O60826 627 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 GHRP10912 638 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 SPRP35270 261 aaPredicted RBP13.63□□□□□ -0.23
TCF3-220ENST00000611869 SP2Q02086 613 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 MMRN1Q13201 1228 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 MTHFD1LQ6UB35 978 aa13.63□□□□□ -0.23
TCF3-220ENST00000611869 ACAD11Q709F0 780 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms