RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 RBL1P28749 1068 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 GNL1P36915 607 aaPredicted RBP9.02□□□□□ -0.97
LIG4-204ENST00000611712 AP2B1P63010 937 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 SEPT6Q14141 434 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 RCN1Q15293 331 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 OR6J1Q8NGC5 347 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 SLCO2A1Q92959 643 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 GMLQ99445 158 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 SYT11Q9BT88 431 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 MID2Q9UJV3 735 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 ZNF214Q9UL59 606 aaPredicted RBP9.02□□□□□ -0.97
LIG4-204ENST00000611712 KPNA7A9QM74 516 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 DYNC1LI2O43237 492 aaPredicted RBP9.02□□□□□ -0.97
LIG4-204ENST00000611712 CRCPO75575 148 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 HMGCRP04035 888 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 SERPINB3P29508 390 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 CDKN2BP42772 138 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 POLE2P56282 527 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 THOC5Q13769 683 aaKnown RBP9.02□□□□□ -0.97
LIG4-204ENST00000611712 EFTUD2Q15029 972 aaKnown RBP eCLIP9.02□□□□□ -0.97
LIG4-204ENST00000611712 MMEL1Q495T6 779 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 FAM131BQ86XD5 332 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 ECHDC2Q86YB7 292 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 ANKRD13AQ8IZ07 590 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 SLC26A7Q8TE54 656 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 AFG1LQ8WV93 481 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 TFAP2BQ92481 460 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 SRPK1Q96SB4 655 aaKnown RBP9.02□□□□□ -0.97
LIG4-204ENST00000611712 FAM96AQ9H5X1 160 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 ASB7Q9H672 318 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 ACSS3Q9H6R3 686 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 YY1AP1Q9H869 796 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 KLK14Q9P0G3 267 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 CPSF2Q9P2I0 782 aaKnown RBP9.02□□□□□ -0.97
LIG4-204ENST00000611712 SUFUQ9UMX1 484 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 MCF2P10911 925 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 TCF4P15884 667 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 KLC1Q07866 573 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 HIC1Q14526 733 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 RASA2Q15283 850 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 SLC1A5Q15758 541 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 HSDL1Q3SXM5 330 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 FSCBQ5H9T9 825 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 CRELD2Q6UXH1 353 aaPredicted RBP9.02□□□□□ -0.97
LIG4-204ENST00000611712 RGS9BPQ6ZS82 235 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 TFB1MQ8WVM0 346 aaKnown RBP9.02□□□□□ -0.97
LIG4-204ENST00000611712 NKD2Q969F2 451 aaPredicted RBP9.02□□□□□ -0.97
LIG4-204ENST00000611712 MTBPQ96DY7 904 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 APOPT1Q96IL0 206 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 CPXM1Q96SM3 734 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 SPATS2LQ9NUQ6 558 aaKnown RBP9.02□□□□□ -0.97
LIG4-204ENST00000611712 PPME1Q9Y570 386 aa9.02□□□□□ -0.97
LIG4-204ENST00000611712 MAFBQ9Y5Q3 323 aaPredicted RBP9.02□□□□□ -0.97
LIG4-204ENST00000611712 EDF1O60869 148 aaKnown RBP9.01□□□□□ -0.97
LIG4-204ENST00000611712 LRCH4O75427 683 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 RARBP10826 455 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 CYP2F1P24903 491 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 BNIP1Q12981 228 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 VGLL4Q14135 290 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 ACAP1Q15027 740 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 TCEAL1Q15170 157 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 C4orf22Q6V702 233 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 ERO1BQ86YB8 467 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 RIOX2Q8IUF8 465 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 CCNYL1Q8N7R7 359 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 SIK2Q9H0K1 926 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 ASCC2Q9H1I8 757 aaPredicted RBP9.01□□□□□ -0.97
LIG4-204ENST00000611712 DCLRE1BQ9H816 532 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.01□□□□□ -0.978e-7■■■■■ 73.7
LIG4-204ENST00000611712 LGALS13Q9UHV8 139 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 NENFQ9UMX5 172 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 AP4E1Q9UPM8 1137 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 COL22A1Q8NFW1 1626 aaPredicted RBP9.01□□□□□ -0.97
LIG4-204ENST00000611712 SCN7AQ01118 1682 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 LOC100653049A0A140TA62 436 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 KRT34O76011 436 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 MYL3P08590 195 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 ZNF286BP0CG31 522 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 AQP5P55064 265 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 TPI1P60174 286 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 DEUP1Q05D60 604 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 ART3Q13508 389 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 DNAL1Q4LDG9 190 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 DPY19L2P1Q6NXN4 242 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 B3GNT9Q6UX72 402 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 OTOAQ7RTW8 1153 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 METTL23Q86XA0 190 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 ZDHHC14Q8IZN3 488 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 LRRN4Q8WUT4 740 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 KLRG1Q96E93 195 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 TBC1D10AQ9BXI6 508 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 SHCBP1LQ9BZQ2 653 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 ARMCX1Q9P291 453 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 ECM29Q5VYK3 1845 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 ZNF541Q9H0D2 1346 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 TRUB2O95900 331 aaKnown RBP9.01□□□□□ -0.97
LIG4-204ENST00000611712 CALB2P22676 271 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 ACADSBP45954 432 aa9.01□□□□□ -0.97
LIG4-204ENST00000611712 ZNF143P52747 638 aaPredicted RBP9.01□□□□□ -0.97
LIG4-204ENST00000611712 CRYMQ14894 314 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms