RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 LACTBL1A8MY62 500 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 TBX10O75333 385 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 F2P00734 622 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 PSEN2P49810 448 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 CDK7P50613 346 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 NOP14P78316 857 aaKnown RBP16.69■□□□□ 0.26
RTN1-209ENST00000611068 KPNB1Q14974 876 aaKnown RBP16.69■□□□□ 0.26
RTN1-209ENST00000611068 SLC44A4Q53GD3 710 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 LLGL2Q6P1M3 1020 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 CAPNS2Q96L46 248 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 NACA2Q9H009 215 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 SEMA4AQ9H3S1 761 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 CHKBQ9Y259 395 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 PPME1Q9Y570 386 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 PCDHB4Q9Y5E5 795 aa16.69■□□□□ 0.26
RTN1-209ENST00000611068 MYCP01106 439 aaPredicted RBP16.68■□□□□ 0.26
RTN1-209ENST00000611068 TMEM191BP0C7N4 346 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 PROZP22891 400 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 ADARP55265 1226 aaKnown RBP16.68■□□□□ 0.26
RTN1-209ENST00000611068 FCGRTP55899 365 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 CLDN10P78369 228 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 AUHQ13825 339 aaKnown RBP16.68■□□□□ 0.26
RTN1-209ENST00000611068 FAM47CQ5HY64 1035 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 DAB2IPQ5VWQ8 1189 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 MAP7D3Q8IWC1 876 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 SLC35G2Q8TBE7 412 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 TMEM40Q8WWA1 233 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 SOCS4Q8WXH5 440 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 RPF1Q9H9Y2 349 aaKnown RBP16.68■□□□□ 0.26
RTN1-209ENST00000611068 PFDN4Q9NQP4 134 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 RNF186Q9NXI6 227 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 NOCTQ9UK39 431 aaKnown RBP16.68■□□□□ 0.26
RTN1-209ENST00000611068 UTP11Q9Y3A2 253 aaKnown RBP16.68■□□□□ 0.26
RTN1-209ENST00000611068 NR2E1Q9Y466 385 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 TMEM247A6NEH6 219 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 PGRMC1O00264 195 aaKnown RBP16.68■□□□□ 0.26
RTN1-209ENST00000611068 TSPAN1O60635 241 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 CA8P35219 290 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 RAP1GAPP47736 663 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 MPP2Q14168 576 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 JADE1Q6IE81 842 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 ATP11CQ8NB49 1132 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 ACTRT1Q8TDG2 376 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 CPA5Q8WXQ8 436 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 HAUS1Q96CS2 278 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 BTBD6Q96KE9 485 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 SIKE1Q9BRV8 207 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 EIF2AQ9BY44 585 aaKnown RBP16.68■□□□□ 0.26
RTN1-209ENST00000611068 PRMT7Q9NVM4 692 aaPredicted RBP16.68■□□□□ 0.26
RTN1-209ENST00000611068 CLIC5Q9NZA1 410 aa16.68■□□□□ 0.26
RTN1-209ENST00000611068 ZFXP17010 805 aaPredicted RBP16.67■□□□□ 0.26
RTN1-209ENST00000611068 CCND3P30281 292 aaPredicted RBP16.67■□□□□ 0.26
RTN1-209ENST00000611068 TRPC3Q13507 836 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 MAP7Q14244 749 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.67■□□□□ 0.26
RTN1-209ENST00000611068 ZNF362Q5T0B9 420 aaPredicted RBP16.67■□□□□ 0.26
RTN1-209ENST00000611068 C6orf118Q5T5N4 469 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 C4orf50Q6ZRC1 276 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 MARK2Q7KZI7 788 aaKnown RBP16.67■□□□□ 0.26
RTN1-209ENST00000611068 CATSPER4Q7RTX7 472 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 TGS1Q96RS0 853 aaKnown RBP16.67■□□□□ 0.26
RTN1-209ENST00000611068 SRPK1Q96SB4 655 aaKnown RBP16.67■□□□□ 0.26
RTN1-209ENST00000611068 ZDHHC18Q9NUE0 388 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 POLIQ9UNA4 740 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 TNFSF13BQ9Y275 285 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 TBC1D30Q9Y2I9 924 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 HOXD8P13378 290 aaPredicted RBP16.67■□□□□ 0.26
RTN1-209ENST00000611068 GRIA2P42262 883 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 CD97P48960 835 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 CPT1AP50416 773 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 PLTPP55058 493 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 FMO1Q01740 532 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 DUOXA2Q1HG44 320 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 DEFB115Q30KQ5 88 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 ACSBG2Q5FVE4 666 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 TMEM53Q6P2H8 277 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 VSTM1Q6UX27 236 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 C7orf31Q8N865 590 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 INPP5DQ92835 1189 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 ABHD8Q96I13 439 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 CATSPER2Q96P56 530 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 ZNF184Q99676 751 aaPredicted RBP16.67■□□□□ 0.26
RTN1-209ENST00000611068 MIS12Q9H081 205 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 COG5Q9UP83 839 aa16.67■□□□□ 0.26
RTN1-209ENST00000611068 CDH8P55286 799 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 CUL2Q13617 745 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 GLRA4Q5JXX5 417 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 DAAM2Q86T65 1068 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 SH3TC2Q8TF17 1288 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 CKAP2Q8WWK9 683 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 CTNNBL1Q8WYA6 563 aaPredicted RBP16.66■□□□□ 0.26
RTN1-209ENST00000611068 MIPEPQ99797 713 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 WASF2Q9Y6W5 498 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 NRCAMQ92823 1304 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 KIAA0391O15091 583 aaKnown RBP16.66■□□□□ 0.26
RTN1-209ENST00000611068 LSM1O15116 133 aaKnown RBP16.66■□□□□ 0.26
RTN1-209ENST00000611068 PMM2O15305 246 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 GPR32O75388 356 aa16.66■□□□□ 0.26
RTN1-209ENST00000611068 LMNAP02545 664 aaKnown RBP16.66■□□□□ 0.26
RTN1-209ENST00000611068 CTSHP09668 335 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms