RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, human

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHANK2-219	ENST00000606715	CDH2	P19022	906 aa	Predicted RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	CASP8	Q14790	479 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	FEZF2	Q8TBJ5	459 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	SUSD6	Q92537	303 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	PAWR	Q96IZ0	340 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	WNK4	Q96J92	1243 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	APBA2	Q99767	749 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	ATRN	O75882	1429 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715		A0A087WZ62	844 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	CA12	O43570	354 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	KRT16	P08779	473 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	PTGER2	P43116	358 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	PSEN2	P49810	448 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	BCAT1	P54687	386 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	PRMT2	P55345	433 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	FSCN1	Q16658	493 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	LRRC23	Q53EV4	343 aa	Predicted RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	FIGN	Q5HY92	759 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	RGS9BP	Q6ZS82	235 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	RASGRP2	Q7LDG7	609 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	TEX9	Q8N6V9	391 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	ELAC2	Q9BQ52	826 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	TMEM117	Q9H0C3	514 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	PAK5	Q9P286	719 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	AURKC	Q9UQB9	309 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	MYO5B	Q9ULV0	1848 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	ROBO1	Q9Y6N7	1651 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	TBC1D3B	A6NDS4	549 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	VPS26A	O75436	327 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	ERN1	O75460	977 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	HAUS5	O94927	633 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	SEC31A	O94979	1220 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	NCAPH	Q15003	741 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	KIAA1324	Q6UXG2	1013 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	ILDR1	Q86SU0	546 aa	Predicted RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	DIS3L	Q8TF46	1054 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	DNAJB3	Q8WWF6	145 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	ACSF2	Q96CM8	615 aa	Predicted RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	MRPL17	Q9NRX2	175 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	XPO7	Q9UIA9	1087 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	MRC1	P22897	1456 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	LOC102724159	A0A0B4J2E5	919 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	EVPLL	A8MZ36	301 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	PIK3CD	O00329	1044 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	OPLAH	O14841	1288 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	LSM8	O95777	96 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	SLC9A1	P19634	815 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	BRD2	P25440	801 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	HAL	P42357	657 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	PRIM2	P49643	509 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	PWP2	Q15269	919 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	ALF	Q53S48	1182 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	TIGD7	Q6NT04	549 aa	Predicted RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	MRNIP	Q6NTE8	343 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	SLC27A1	Q6PCB7	646 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	FAM162A	Q96A26	154 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	DNAJC1	Q96KC8	554 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	A1CF	Q9NQ94	594 aa	Known RBP	11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	GTF2A1L	Q9UNN4	478 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	HPSE	Q9Y251	543 aa		11.41	□□□□□ -0.58
SHANK2-219	ENST00000606715	ZBTB48	P10074	688 aa	Predicted RBP	11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	MYL2	P10916	166 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	SPR	P35270	261 aa	Predicted RBP	11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	STAT4	Q14765	748 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	LLGL2	Q6P1M3	1020 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	ANKRD23	Q86SG2	305 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	OMD	Q99983	421 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	TINF2	Q9BSI4	451 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	C17orf80	Q9BSJ5	609 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	GOLGA8T	H3BQL2	631 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	SP100	P23497	879 aa	Predicted RBP	11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	MAP3K7CL	P57077	242 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	CENPC	Q03188	943 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	BTK	Q06187	659 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	RETSAT	Q6NUM9	610 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	ACOT1	Q86TX2	421 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	FIBCD1	Q8N539	461 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	SNX12	Q9UMY4	172 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	RRP15	Q9Y3B9	282 aa	Known RBP	11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	TRPV2	Q9Y5S1	764 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	MAN1A2	O60476	641 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	ITIH2	P19823	946 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	PTPN3	P26045	913 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	ALDH6A1	Q02252	535 aa	Known RBP	11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	INPP5A	Q14642	412 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	OVOS1	Q6IE37	1185 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	C16orf62	Q7Z3J2	963 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	TRMT11	Q7Z4G4	463 aa	Known RBP	11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	CEP70	Q8NHQ1	597 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	MCOLN3	Q8TDD5	553 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	CLPB	Q9H078	707 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	RRN3	Q9NYV6	651 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	VPS51	Q9UID3	782 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	MTA2	O94776	668 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	NUMB	P49757	651 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	MDH1B	Q5I0G3	518 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	ACAD10	Q6JQN1	1059 aa		11.4	□□□□□ -0.58
SHANK2-219	ENST00000606715	SLC30A10	Q6XR72	485 aa		11.4	□□□□□ -0.58

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