RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 RRP7AQ9Y3A4 280 aaKnown RBP4.72□□□□□ -1.65
AC004542.1-201ENST00000602955 COL15A1P39059 1388 aa4.72□□□□□ -1.65
AC004542.1-201ENST00000602955 A0A1B0GTW7 788 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 A0A1W2PS29 197 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 CCDC78A2IDD5 438 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 A6NCN8 305 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 BTBD11A6QL63 1104 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 ADM5C9JUS6 153 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 EXOC5O00471 708 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 TSPAN3O60637 253 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 CBFA2T3O75081 653 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 RPP40O75818 363 aaKnown RBP4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 KRT38O76015 456 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 HLA-DOAP06340 250 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 ZSCAN22P10073 491 aaPredicted RBP4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 SERPINA4P29622 427 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 NTSR1P30989 418 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 UQCRC1P31930 480 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 NDUFV1P49821 464 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 LINC00310P59036 64 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 DCAF7P61962 342 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 TOMM20Q15388 145 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 ARHGAP40Q5TG30 622 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 C1QL3Q5VWW1 255 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 ATG16L1Q676U5 607 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 TTLL5Q6EMB2 1281 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 SFRP4Q6FHJ7 346 aaPredicted RBP4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 RGS7BPQ6MZT1 257 aaPredicted RBP4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 C16orf54Q6UWD8 224 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 HTR3DQ70Z44 454 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 CLNKQ7Z7G1 428 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 TRABD2AQ86V40 505 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 TMTC2Q8N394 836 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 TCP11L2Q8N4U5 519 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 MB21D1Q8N884 522 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 Q8NA96 180 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 ERP27Q96DN0 273 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 TREX2Q9BQ50 279 aaPredicted RBP4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 REEP2Q9BRK0 252 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 PAIP1Q9H074 479 aaKnown RBP4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 CHODLQ9H9P2 273 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 PLEKHA5Q9HAU0 1116 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 AASSQ9UDR5 926 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 KCND3Q9UK17 655 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 DNAJC16Q9Y2G8 782 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 AFG3L2Q9Y4W6 797 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 SLC30A1Q9Y6M5 507 aa4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 TTBK1Q5TCY1 1321 aaPredicted RBP4.71□□□□□ -1.66
AC004542.1-201ENST00000602955 GXYLT2A0PJZ3 443 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 ANKRD18BA2A2Z9 1011 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 AGPSO00116 658 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 LEFTY2O00292 366 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 TOR1BO14657 336 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 RAD17O75943 681 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 TMEM63AO94886 807 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 LARGE1O95461 756 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 CER1O95813 267 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 HNRNPA1P09651 372 aaKnown RBP eCLIP4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 FGFR4P22455 802 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 EPHA3P29320 983 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 HTR7P34969 479 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 MSX2P35548 267 aaPredicted RBP4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 GATMP50440 423 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 PDE6CP51160 858 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 RABGGTBP53611 331 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 CASP6P55212 293 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 CSHL1Q14406 222 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 HLXQ14774 488 aaPredicted RBP4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 CLCA4Q14CN2 919 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 RPS6KA2Q15349 733 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 TBRG1Q3YBR2 411 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 NRN1LQ496H8 165 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 GALNTL6Q49A17 601 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 SLFN13Q68D06 897 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 DGAT2L7PQ6IED9 249 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 ACAD10Q6JQN1 1059 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 FASTKD5Q7L8L6 764 aaKnown RBP4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 RASGRP2Q7LDG7 609 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 ANKRD35Q8N283 1001 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 D2HGDHQ8N465 521 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 FAM109AQ8N4B1 249 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 LRRC71Q8N4P6 559 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 SUN3Q8TAQ9 357 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 UCMAQ8WVF2 138 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 MIEF2Q96C03 454 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 OR14A2Q96R54 314 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 CHCHD6Q9BRQ6 235 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 ABHD16BQ9H3Z7 469 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 TMLHEQ9NVH6 421 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 RIMKLBQ9ULI2 386 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 TBX20Q9UMR3 447 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 ARHGAP26Q9UNA1 814 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 USP22Q9UPT9 525 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 SSX2IPQ9Y2D8 614 aa4.7□□□□□ -1.66
AC004542.1-201ENST00000602955 AATKQ6ZMQ8 1374 aa4.69□□□□□ -1.66
AC004542.1-201ENST00000602955 PRAMEF33A0A0G2JMD5 474 aa4.69□□□□□ -1.66
AC004542.1-201ENST00000602955 FAM90A20PA6NIJ5 464 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms