RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 PRR20CP86479 221 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PRR20DP86480 221 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PRR20BP86481 221 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PRR20AP86496 221 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 TLE2Q04725 743 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 GRAMD4Q6IC98 578 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 KIAA1211LQ6NV74 962 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 NPNTQ6UXI9 565 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 C3orf62Q6ZUJ4 267 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 RFX8Q6ZV50 586 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 TTC5Q8N0Z6 440 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 TMEM102Q8N9M5 508 aaPredicted RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 AGBL5Q8NDL9 886 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 DQX1Q8TE96 717 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 IRGQQ8WZA9 623 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 P3H4Q92791 437 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 KIFAP3Q92845 792 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 TRIM43Q96BQ3 446 aaPredicted RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 EYA3Q99504 573 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 HNRNPABQ99729 332 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 GCOM2Q9BZD3 368 aaPredicted RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 CD244Q9BZW8 370 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 TRPV6Q9H1D0 765 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PIDD1Q9HB75 910 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 MKNK2Q9HBH9 465 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PARVBQ9HBI1 364 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 THG1LQ9NWX6 298 aaKnown RBP5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 ADPRHL2Q9NX46 363 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 NAALAD2Q9Y3Q0 740 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 L3MBTL1Q9Y468 752 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PCDHGA1Q9Y5H4 931 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 PIAS3Q9Y6X2 628 aa5.26□□□□□ -1.57
SPTBN1-206ENST00000602898 FAM234BA2RU67 622 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 A4D1N5 150 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 SRRM3A6NNA2 597 aaPredicted RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 SYF2O95926 243 aaKnown RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 ASGR1P07306 291 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 THBS1P07996 1170 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 HNRNPA1P09651 372 aaKnown RBP eCLIP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 ALADP13716 330 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 RFC1P35251 1148 aaPredicted RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 PPARGP37231 505 aaPredicted RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 CLCN4P51793 760 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 PPP2R2AP63151 447 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 GSTO1P78417 241 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 MAP4K2Q12851 820 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 STK11Q15831 433 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 HADHQ16836 314 aaKnown RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 IGSF11Q5DX21 431 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 NBPF12Q5TAG4 269 aaPredicted RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 SNX30Q5VWJ9 437 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 IZUMO3Q5VZ72 239 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 E4F1Q66K89 784 aaPredicted RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 SULT6B1Q6IMI4 303 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 PPP1R21Q6ZMI0 780 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 KRT25Q7Z3Z0 450 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 SLFN11Q7Z7L1 901 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 CCDC83Q8IWF9 413 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 CARFQ8N187 725 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 SCAIQ8N9R8 606 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 TTLL11Q8NHH1 800 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 DDI1Q8WTU0 396 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 NCSTNQ92542 709 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 FAM84AQ96KN4 292 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 FGD4Q96M96 766 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 PRRX2Q99811 253 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 PYM1Q9BRP8 204 aaKnown RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 SIKE1Q9BRV8 207 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 GORASP2Q9H8Y8 452 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 SATB2Q9UPW6 733 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 SIK3Q9Y2K2 1263 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 ABCC6O95255 1503 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 ALS2Q96Q42 1657 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 TRPM3Q9HCF6 1732 aaPredicted RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 HDAC3O15379 428 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 GSTA2P09210 222 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 GSPT1P15170 499 aaKnown RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 PDE6AP16499 860 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 NOS3P29474 1203 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 CCR1P32246 355 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 EVI2BP34910 448 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 GNL1P36915 607 aaPredicted RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 ACADSBP45954 432 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 DR1Q01658 176 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 CAMK2DQ13557 499 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 LRRC32Q14392 662 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 FSCBQ5H9T9 825 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 ATAT1Q5SQI0 421 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 RASIP1Q5U651 963 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 PM20D1Q6GTS8 502 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 C2CD5Q86YS7 1000 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 GLIS3Q8NEA6 775 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 ANKS1AQ92625 1134 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 HS6ST2Q96MM7 605 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 TCF25Q9BQ70 676 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 ZCCHC2Q9C0B9 1178 aaKnown RBP5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 FAM192AQ9GZU8 254 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 OPA3Q9H6K4 179 aa5.25□□□□□ -1.57
SPTBN1-206ENST00000602898 TMEM206Q9H813 350 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms