RNA–Protein interactions for RNA: ENST00000602113.5

DDX49-213, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-213ENST00000602113 EFHC1Q5JVL4 640 aa18.34■□□□□ 0.53
DDX49-213ENST00000602113 NIPA2Q8N8Q9 360 aa18.34■□□□□ 0.53
DDX49-213ENST00000602113 STKLD1Q8NE28 680 aa18.34■□□□□ 0.53
DDX49-213ENST00000602113 ZNF461Q8TAF7 563 aa18.34■□□□□ 0.53
DDX49-213ENST00000602113 SPPL3Q8TCT6 385 aa18.34■□□□□ 0.53
DDX49-213ENST00000602113 FNIP1Q8TF40 1166 aa18.34■□□□□ 0.53
DDX49-213ENST00000602113 RXFP2Q8WXD0 754 aa18.34■□□□□ 0.53
DDX49-213ENST00000602113 SEPT5Q99719 369 aaPredicted RBP18.34■□□□□ 0.53
DDX49-213ENST00000602113 AFF4Q9UHB7 1163 aaKnown RBP18.34■□□□□ 0.53
DDX49-213ENST00000602113 USP3Q9Y6I4 520 aa18.34■□□□□ 0.53
DDX49-213ENST00000602113 PATJQ8NI35 1801 aa18.33■□□□□ 0.53
DDX49-213ENST00000602113 TEX28O15482 410 aa18.33■□□□□ 0.52
DDX49-213ENST00000602113 DDX3YO15523 660 aaKnown RBP18.33■□□□□ 0.52
DDX49-213ENST00000602113 SPOPO43791 374 aa18.33■□□□□ 0.52
DDX49-213ENST00000602113 SRGAP2O75044 1071 aa18.33■□□□□ 0.52
DDX49-213ENST00000602113 SEC24AO95486 1093 aa18.33■□□□□ 0.52
DDX49-213ENST00000602113 PSMA2P25787 234 aa18.33■□□□□ 0.52
DDX49-213ENST00000602113 MGAT5BQ3V5L5 792 aa18.33■□□□□ 0.52
DDX49-213ENST00000602113 PM20D1Q6GTS8 502 aa18.33■□□□□ 0.52
DDX49-213ENST00000602113 HFE2Q6ZVN8 426 aa18.33■□□□□ 0.52
DDX49-213ENST00000602113 ARFGAP1Q8N6T3 406 aa18.33■□□□□ 0.52
DDX49-213ENST00000602113 GPR152Q8TDT2 470 aa18.33■□□□□ 0.52
DDX49-213ENST00000602113 PSMB7Q99436 277 aa18.33■□□□□ 0.52
DDX49-213ENST00000602113 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.33■□□□□ 0.52
DDX49-213ENST00000602113 LCMT1Q9UIC8 334 aa18.33■□□□□ 0.52
DDX49-213ENST00000602113 YJEFN3A6XGL0 299 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 E7ENQ6 273 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 CXCL14O95715 111 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 CNPP09543 421 aaKnown RBP18.32■□□□□ 0.52
DDX49-213ENST00000602113 PDGFRAP16234 1089 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 GPD1P21695 349 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 SLC1A1P43005 524 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 MARCKSL1P49006 195 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 ZNF143P52747 638 aaPredicted RBP18.32■□□□□ 0.52
DDX49-213ENST00000602113 PIGHQ14442 188 aaPredicted RBP18.32■□□□□ 0.52
DDX49-213ENST00000602113 CCDC14Q49A88 953 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 TPGS2Q68CL5 300 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 ARCQ7LC44 396 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 TMC7Q7Z402 723 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 SCML4Q8N228 414 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 KRT35Q92764 455 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 OSBPL9Q96SU4 736 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 ASNSD1Q9NWL6 643 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 USTQ9Y2C2 406 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 SAR1BQ9Y6B6 198 aa18.32■□□□□ 0.52
DDX49-213ENST00000602113 DPYSL4O14531 572 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 HSF2BPO75031 334 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 ATF2P15336 505 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 TCF4P15884 667 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 PRLRP16471 622 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 CXCR5P32302 372 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 TAS2R40P59535 323 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 YWHAZP63104 245 aaKnown RBP18.31■□□□□ 0.52
DDX49-213ENST00000602113 CREMQ03060 361 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.31■□□□□ 0.52
DDX49-213ENST00000602113 COG1Q8WTW3 980 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 POF1BQ8WVV4 589 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 ALG3Q92685 438 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 FAM149B1Q96BN6 582 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 CFAP57Q96MR6 1250 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 TCF25Q9BQ70 676 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 CNPY3Q9BT09 278 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 SSX2IPQ9Y2D8 614 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 GBF1Q92538 1859 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.31■□□□□ 0.52
DDX49-213ENST00000602113 ZNF185O15231 689 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 GRM6O15303 877 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 DAB1O75553 588 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 FYNP06241 537 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 RB1P06400 928 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 GLI1P08151 1106 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 ATF6P18850 670 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 CTNNA2P26232 953 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 CA8P35219 290 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 CTNNA1P35221 906 aaKnown RBP18.31■□□□□ 0.52
DDX49-213ENST00000602113 PEX5P50542 639 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 USP46P62068 366 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 C15orf59Q2T9L4 293 aaPredicted RBP18.31■□□□□ 0.52
DDX49-213ENST00000602113 RAB6CQ53S08 254 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 SH3PXD2AQ5TCZ1 1133 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 CC2D1AQ6P1N0 951 aaPredicted RBP18.31■□□□□ 0.52
DDX49-213ENST00000602113 NUP93Q8N1F7 819 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 IRGQQ8WZA9 623 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 SPATA17Q96L03 361 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 SLC2A13Q96QE2 648 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 TGS1Q96RS0 853 aaKnown RBP18.31■□□□□ 0.52
DDX49-213ENST00000602113 DDX23Q9BUQ8 820 aaKnown RBP18.31■□□□□ 0.52
DDX49-213ENST00000602113 PBX4Q9BYU1 374 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 ADAM33Q9BZ11 813 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 RAB6CQ9H0N0 254 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 L2HGDHQ9H9P8 463 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 IL37Q9NZH6 218 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 CDC23Q9UJX2 597 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 MRFAP1Q9Y605 127 aa18.31■□□□□ 0.52
DDX49-213ENST00000602113 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.3■□□□□ 0.52
DDX49-213ENST00000602113 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.3■□□□□ 0.52
DDX49-213ENST00000602113 MIF4GDA9UHW6 222 aaKnown RBP18.3■□□□□ 0.52
DDX49-213ENST00000602113 SART1O43290 800 aaKnown RBP18.3■□□□□ 0.52
DDX49-213ENST00000602113 CSPG5O95196 566 aa18.3■□□□□ 0.52
DDX49-213ENST00000602113 TFE3P19532 575 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms