RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 CAPN10Q9HC96 672 aa17.87■□□□□ 0.45
USE1-208ENST00000600970 PPP4R2Q9NY27 417 aa17.87■□□□□ 0.45
USE1-208ENST00000600970 NME7Q9Y5B8 376 aa17.87■□□□□ 0.45
USE1-208ENST00000600970 DMXL2Q8TDJ6 3036 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 OPHN1O60890 802 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 TNNC2P02585 160 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 CAPNS1P04632 268 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 RDXP35241 583 aaKnown RBP17.86■□□□□ 0.45
USE1-208ENST00000600970 CACNA2D1P54289 1103 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 GFPT1Q06210 699 aaPredicted RBP17.86■□□□□ 0.45
USE1-208ENST00000600970 ALCAMQ13740 583 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 LY6G5CQ5SRR4 150 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 TDRD10Q5VZ19 366 aaKnown RBP17.86■□□□□ 0.45
USE1-208ENST00000600970 SLC36A4Q6YBV0 504 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 SV2BQ7L1I2 683 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 HS2ST1Q7LGA3 356 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 MMS19Q96T76 1030 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 TMEM30AQ9NV96 361 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 TBC1D14Q9P2M4 693 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 CCDC39Q9UFE4 941 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 IGF2RP11717 2491 aa17.86■□□□□ 0.45
USE1-208ENST00000600970 E2F8A0AVK6 867 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 PRPF6O94906 941 aaKnown RBP17.85■□□□□ 0.45
USE1-208ENST00000600970 NEFLP07196 543 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 CD59P13987 128 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 IDEP14735 1019 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 GABRG2P18507 467 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 ADAMTS20P59510 1910 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 GAD2Q05329 585 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 ZNF33AQ06730 810 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 IFRD2Q12894 506 aaPredicted RBP17.85■□□□□ 0.45
USE1-208ENST00000600970 DUOXA2Q1HG44 320 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 RRAGBQ5VZM2 374 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 BRAPQ7Z569 592 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 RAB44Q7Z6P3 723 aaPredicted RBP17.85■□□□□ 0.45
USE1-208ENST00000600970 ETFBKMTQ8IXQ9 262 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 MINDY1Q8N5J2 469 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 ZNF513Q8N8E2 541 aaPredicted RBP17.85■□□□□ 0.45
USE1-208ENST00000600970 NAT16Q8N8M0 369 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 OR2I1PQ8NGU4 316 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 MYO18AQ92614 2054 aaKnown RBP17.85■□□□□ 0.45
USE1-208ENST00000600970 ZFRQ96KR1 1074 aaKnown RBP17.85■□□□□ 0.45
USE1-208ENST00000600970 SLITRK1Q96PX8 696 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 MRPL45Q9BRJ2 306 aaKnown RBP17.85■□□□□ 0.45
USE1-208ENST00000600970 CALCOCO1Q9P1Z2 691 aa17.85■□□□□ 0.45
USE1-208ENST00000600970 FRMD3A2A2Y4 597 aa17.84■□□□□ 0.45
USE1-208ENST00000600970 TBC1D3BA6NDS4 549 aa17.84■□□□□ 0.45
USE1-208ENST00000600970 GNL1P36915 607 aaPredicted RBP17.84■□□□□ 0.45
USE1-208ENST00000600970 BTBD8Q5XKL5 378 aa17.84■□□□□ 0.45
USE1-208ENST00000600970 LARP1BQ659C4 914 aaKnown RBP17.84■□□□□ 0.45
USE1-208ENST00000600970 TRMT11Q7Z4G4 463 aaKnown RBP17.84■□□□□ 0.45
USE1-208ENST00000600970 RABEPKQ7Z6M1 372 aa17.84■□□□□ 0.45
USE1-208ENST00000600970 PROSER1Q86XN7 944 aa17.84■□□□□ 0.45
USE1-208ENST00000600970 KCNV2Q8TDN2 545 aa17.84■□□□□ 0.45
USE1-208ENST00000600970 OTUB2Q96DC9 234 aa17.84■□□□□ 0.45
USE1-208ENST00000600970 HCN2Q9UL51 889 aa17.84■□□□□ 0.45
USE1-208ENST00000600970 ATRXP46100 2492 aa17.83■□□□□ 0.45
USE1-208ENST00000600970 IGHV1OR15-9A0A0B4J2B8 117 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 ZNF233A6NK53 670 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 ARHGAP33O14559 1287 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 KIAA0391O15091 583 aaKnown RBP17.83■□□□□ 0.44
USE1-208ENST00000600970 HOXC11O43248 304 aaPredicted RBP17.83■□□□□ 0.44
USE1-208ENST00000600970 COCHO43405 550 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 TULP3O75386 442 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 CST3P01034 146 aaPredicted RBP17.83■□□□□ 0.44
USE1-208ENST00000600970 PTPN1P18031 435 aaKnown RBP17.83■□□□□ 0.44
USE1-208ENST00000600970 WASP42768 502 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 RABEP1Q15276 862 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 SURF1Q15526 300 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 ZNF423Q2M1K9 1284 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 CBWD2Q8IUF1 395 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 SLC41A1Q8IVJ1 513 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 TERB1Q8NA31 727 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 OR6B3Q8NGW1 331 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 CAMK1GQ96NX5 476 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 ZNF518BQ9C0D4 1074 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 ELOVL4Q9GZR5 314 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 SNX25Q9H3E2 840 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 DPEP3Q9H4B8 488 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 PANK4Q9NVE7 773 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 DNAAF2Q9NVR5 837 aaKnown RBP17.83■□□□□ 0.44
USE1-208ENST00000600970 DEC1Q9P2X7 70 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 FBXO2Q9UK22 296 aaPredicted RBP17.83■□□□□ 0.44
USE1-208ENST00000600970 SMC3Q9UQE7 1217 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 CLIC4Q9Y696 253 aa17.83■□□□□ 0.44
USE1-208ENST00000600970 A0A1W2PQF6 199 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 CLDN5O00501 218 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 TRIM24O15164 1050 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 TACC1O75410 805 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 CD2BP2O95400 341 aaKnown RBP17.82■□□□□ 0.44
USE1-208ENST00000600970 HOXB2P14652 356 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 YWHAQP27348 245 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 NTSR1P30989 418 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 HNRNPDQ14103 355 aaKnown RBP17.82■□□□□ 0.44
USE1-208ENST00000600970 PREPLQ4J6C6 727 aaPredicted RBP17.82■□□□□ 0.44
USE1-208ENST00000600970 C10orf76Q5T2E6 689 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 TRAPPC11Q7Z392 1133 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 MIB1Q86YT6 1006 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 WDR49Q8IV35 697 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 BBS7Q8IWZ6 715 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms