RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 YWHAQP27348 245 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 SCNN1AP37088 669 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 DAOAP59103 153 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 USP46P62068 366 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 RBM10P98175 930 aaKnown RBP15.09■□□□□ 0.01
UPF1-211ENST00000600868 MTMR3Q13615 1198 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 COL19A1Q14993 1142 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 TAF12Q16514 161 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 CTC1Q2NKJ3 1217 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 C2CD6Q53TS8 623 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 CYP4A22Q5TCH4 519 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 OLFML1Q6UWY5 402 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 FAM183BPQ6ZVS7 135 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 Q7L0L9 218 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 XYLT1Q86Y38 959 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 DNAAF5Q86Y56 855 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 ELMOD1Q8N336 334 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 ACRBPQ8NEB7 543 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 CMASQ8NFW8 434 aaPredicted RBP15.09■□□□□ 0.01
UPF1-211ENST00000600868 IRGQQ8WZA9 623 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 MCRS1Q96EZ8 462 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 ZNF512Q96ME7 567 aaPredicted RBP15.09■□□□□ 0.01
UPF1-211ENST00000600868 CDX2Q99626 313 aaPredicted RBP15.09■□□□□ 0.01
UPF1-211ENST00000600868 PACSIN1Q9BY11 444 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 PRKD2Q9BZL6 878 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 ULBP1Q9BZM6 244 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 SFXN1Q9H9B4 322 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 AVENQ9NQS1 362 aaPredicted RBP15.09■□□□□ 0.01
UPF1-211ENST00000600868 ADGRG1Q9Y653 693 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 PRRC2BQ5JSZ5 2229 aaKnown RBP15.09■□□□□ 0.01
UPF1-211ENST00000600868 FAM170AA1A519 330 aa15.08■□□□□ 0
UPF1-211ENST00000600868 CCL16O15467 120 aa15.08■□□□□ 0
UPF1-211ENST00000600868 XYLBO75191 536 aa15.08■□□□□ 0
UPF1-211ENST00000600868 CYP1A2P05177 515 aa15.08■□□□□ 0
UPF1-211ENST00000600868 GLI1P08151 1106 aa15.08■□□□□ 0
UPF1-211ENST00000600868 USP17L7P0C7H9 530 aa15.08■□□□□ 0
UPF1-211ENST00000600868 TMEM253P0C7T8 217 aa15.08■□□□□ 0
UPF1-211ENST00000600868 HOXB8P17481 243 aaPredicted RBP15.08■□□□□ 0
UPF1-211ENST00000600868 RRM1P23921 792 aa15.08■□□□□ 0
UPF1-211ENST00000600868 VAV2P52735 878 aa15.08■□□□□ 0
UPF1-211ENST00000600868 GPC5P78333 572 aa15.08■□□□□ 0
UPF1-211ENST00000600868 MRPS5P82675 430 aaKnown RBP15.08■□□□□ 0
UPF1-211ENST00000600868 SLC6A3Q01959 620 aa15.08■□□□□ 0
UPF1-211ENST00000600868 OR6B2Q6IFH4 312 aa15.08■□□□□ 0
UPF1-211ENST00000600868 TXLNBQ8N3L3 684 aa15.08■□□□□ 0
UPF1-211ENST00000600868 DEFB123Q8N688 67 aa15.08■□□□□ 0
UPF1-211ENST00000600868 C3orf20Q8ND61 904 aa15.08■□□□□ 0
UPF1-211ENST00000600868 STKLD1Q8NE28 680 aa15.08■□□□□ 0
UPF1-211ENST00000600868 CTNNBL1Q8WYA6 563 aaPredicted RBP15.08■□□□□ 0
UPF1-211ENST00000600868 OVCA2Q8WZ82 227 aa15.08■□□□□ 0
UPF1-211ENST00000600868 FBXO32Q969P5 355 aa15.08■□□□□ 0
UPF1-211ENST00000600868 ZNF653Q96CK0 615 aa15.08■□□□□ 0
UPF1-211ENST00000600868 DESI2Q9BSY9 194 aa15.08■□□□□ 0
UPF1-211ENST00000600868 THAP2Q9H0W7 228 aa15.08■□□□□ 0
UPF1-211ENST00000600868 ASNSD1Q9NWL6 643 aa15.08■□□□□ 0
UPF1-211ENST00000600868 UXTQ9UBK9 157 aaPredicted RBP15.08■□□□□ 0
UPF1-211ENST00000600868 CNOT8Q9UFF9 292 aaKnown RBP15.08■□□□□ 0
UPF1-211ENST00000600868 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.08■□□□□ 0
UPF1-211ENST00000600868 CCDC195A0A1B0GUA6 201 aa15.07■□□□□ 0
UPF1-211ENST00000600868 TCRBV5S1A1TA0A578 114 aa15.07■□□□□ 0
UPF1-211ENST00000600868 SPDYE4A6NLX3 237 aa15.07■□□□□ 0
UPF1-211ENST00000600868 LINC01565O15544 149 aa15.07■□□□□ 0
UPF1-211ENST00000600868 PJA2O43164 708 aa15.07■□□□□ 0
UPF1-211ENST00000600868 CCDC175P0C221 793 aa15.07■□□□□ 0
UPF1-211ENST00000600868 ABCB4P21439 1286 aa15.07■□□□□ 0
UPF1-211ENST00000600868 EPHA5P54756 1037 aa15.07■□□□□ 0
UPF1-211ENST00000600868 IFRD2Q12894 506 aaPredicted RBP15.07■□□□□ 0
UPF1-211ENST00000600868 TAF10Q12962 218 aa15.07■□□□□ 0
UPF1-211ENST00000600868 EFHC1Q5JVL4 640 aa15.07■□□□□ 0
UPF1-211ENST00000600868 PLEKHA7Q6IQ23 1121 aa15.07■□□□□ 0
UPF1-211ENST00000600868 ANKRD54Q6NXT1 300 aa15.07■□□□□ 0
UPF1-211ENST00000600868 SLC26A9Q7LBE3 791 aa15.07■□□□□ 0
UPF1-211ENST00000600868 BHLHA9Q7RTU4 235 aa15.07■□□□□ 0
UPF1-211ENST00000600868 MON1AQ86VX9 555 aa15.07■□□□□ 0
UPF1-211ENST00000600868 LEMD2Q8NC56 503 aa15.07■□□□□ 0
UPF1-211ENST00000600868 CLEC4CQ8WTT0 213 aa15.07■□□□□ 0
UPF1-211ENST00000600868 MYLIPQ8WY64 445 aa15.07■□□□□ 0
UPF1-211ENST00000600868 ZNF707Q96C28 371 aaPredicted RBP15.07■□□□□ 0
UPF1-211ENST00000600868 GUCD1Q96NT3 240 aa15.07■□□□□ 0
UPF1-211ENST00000600868 SLITRK1Q96PX8 696 aa15.07■□□□□ 0
UPF1-211ENST00000600868 LRRC3Q9BY71 257 aa15.07■□□□□ 0
UPF1-211ENST00000600868 PARVAQ9NVD7 372 aa15.07■□□□□ 0
UPF1-211ENST00000600868 MAGED2Q9UNF1 606 aaPredicted RBP15.07■□□□□ 0
UPF1-211ENST00000600868 ZNF638Q14966 1978 aaKnown RBP15.07■□□□□ 0
UPF1-211ENST00000600868 SIGLEC16A6NMB1 481 aa15.06■□□□□ 0
UPF1-211ENST00000600868 ZDHHC11BP0C7U3 371 aa15.06■□□□□ 0
UPF1-211ENST00000600868 PTPN2P17706 415 aa15.06■□□□□ 0
UPF1-211ENST00000600868 PPP3CCP48454 512 aa15.06■□□□□ 0
UPF1-211ENST00000600868 PSEN1P49768 467 aa15.06■□□□□ 0
UPF1-211ENST00000600868 MAMLD1Q13495 774 aa15.06■□□□□ 0
UPF1-211ENST00000600868 TCEAL1Q15170 157 aa15.06■□□□□ 0
UPF1-211ENST00000600868 FAM102AQ5T9C2 384 aaPredicted RBP15.06■□□□□ 0
UPF1-211ENST00000600868 DNAJC24Q6P3W2 148 aa15.06■□□□□ 0
UPF1-211ENST00000600868 SYCE2Q6PIF2 218 aa15.06■□□□□ 0
UPF1-211ENST00000600868 ARCQ7LC44 396 aa15.06■□□□□ 0
UPF1-211ENST00000600868 KIAA1328Q86T90 577 aa15.06■□□□□ 0
UPF1-211ENST00000600868 TMC8Q8IU68 726 aa15.06■□□□□ 0
UPF1-211ENST00000600868 ARHGAP18Q8N392 663 aa15.06■□□□□ 0
UPF1-211ENST00000600868 C12orf76Q8N812 135 aaPredicted RBP15.06■□□□□ 0
UPF1-211ENST00000600868 PDZD8Q8NEN9 1154 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms