RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 TCP11X2Q5H9J9 407 aa16.33■□□□□ 0.2
XRCC1-206ENST00000597811 TMEM270Q6UE05 265 aa16.33■□□□□ 0.2
XRCC1-206ENST00000597811 ARHGEF19Q8IW93 802 aa16.33■□□□□ 0.2
XRCC1-206ENST00000597811 NUP93Q8N1F7 819 aa16.33■□□□□ 0.2
XRCC1-206ENST00000597811 CELF5Q8N6W0 485 aaKnown RBP16.33■□□□□ 0.2
XRCC1-206ENST00000597811 TTC8Q8TAM2 541 aa16.33■□□□□ 0.2
XRCC1-206ENST00000597811 USP13Q92995 863 aaPredicted RBP16.33■□□□□ 0.2
XRCC1-206ENST00000597811 NDST4Q9H3R1 872 aa16.33■□□□□ 0.2
XRCC1-206ENST00000597811 UBE2TQ9NPD8 197 aaPredicted RBP16.33■□□□□ 0.2
XRCC1-206ENST00000597811 TRPM5Q9NZQ8 1165 aa16.33■□□□□ 0.2
XRCC1-206ENST00000597811 ZMYM5Q9UJ78 669 aa16.33■□□□□ 0.2
XRCC1-206ENST00000597811 RTN3O95197 1032 aaPredicted RBP16.32■□□□□ 0.2
XRCC1-206ENST00000597811 KRT5P13647 590 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 EEF1GP26641 437 aaKnown RBP16.32■□□□□ 0.2
XRCC1-206ENST00000597811 KPNA1P52294 538 aaPredicted RBP16.32■□□□□ 0.2
XRCC1-206ENST00000597811 MLLT6P55198 1093 aaPredicted RBP16.32■□□□□ 0.2
XRCC1-206ENST00000597811 TNK2Q07912 1038 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 MTAPQ13126 283 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 SGO2Q562F6 1265 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 PPP1R26Q5T8A7 1209 aaPredicted RBP16.32■□□□□ 0.2
XRCC1-206ENST00000597811 TXNDC11Q6PKC3 985 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 PAQR9Q6ZVX9 377 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 MON1AQ86VX9 555 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 SLC4A11Q8NBS3 891 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 RIN3Q8TB24 985 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 KAT5Q92993 513 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 FBXO32Q969P5 355 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 CEP295NLQ96MC4 621 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 SLITRK1Q96PX8 696 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 HNRNPABQ99729 332 aaKnown RBP16.32■□□□□ 0.2
XRCC1-206ENST00000597811 FAM124BQ9H5Z6 455 aaPredicted RBP16.32■□□□□ 0.2
XRCC1-206ENST00000597811 FANCLQ9NW38 375 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 TAB2Q9NYJ8 693 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 FBXO4Q9UKT5 387 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 DNAH14Q0VDD8 3507 aa16.32■□□□□ 0.2
XRCC1-206ENST00000597811 MYO16Q9Y6X6 1858 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 SYCE3A1L190 88 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 SPECC1L-ADORA2AF8WAN1 911 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 SLC9A1P19634 815 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 YWHAQP27348 245 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 CTHP32929 405 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 USP8P40818 1118 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 SLC5A3P53794 718 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 MFAP3P55082 362 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 USP46P62068 366 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 PLCB2Q00722 1185 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 CSTF1Q05048 431 aaKnown RBP16.31■□□□□ 0.2
XRCC1-206ENST00000597811 ARHGAP44Q17R89 818 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 SKOR2Q2VWA4 1001 aaPredicted RBP16.31■□□□□ 0.2
XRCC1-206ENST00000597811 ZNF528Q3MIS6 628 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 TRIM65Q6PJ69 517 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 TSSK4Q6SA08 328 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 AOPEPQ8N6M6 819 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 LMO3Q8TAP4 145 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 MSANTD3Q96H12 275 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 SLC22A12Q96S37 553 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 SMOQ99835 787 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 VPS16Q9H269 839 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 CHRDQ9H2X0 955 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 C8orf33Q9H7E9 229 aaPredicted RBP16.31■□□□□ 0.2
XRCC1-206ENST00000597811 LMAN1LQ9HAT1 526 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 PRMT8Q9NR22 394 aaPredicted RBP16.31■□□□□ 0.2
XRCC1-206ENST00000597811 TDP1Q9NUW8 608 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 TMEM30AQ9NV96 361 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 HESX1Q9UBX0 185 aa16.31■□□□□ 0.2
XRCC1-206ENST00000597811 SOBPA7XYQ1 873 aa16.3■□□□□ 0.2
XRCC1-206ENST00000597811 BEST1O76090 585 aa16.3■□□□□ 0.2
XRCC1-206ENST00000597811 CKMP06732 381 aa16.3■□□□□ 0.2
XRCC1-206ENST00000597811 CHRNB1P11230 501 aa16.3■□□□□ 0.2
XRCC1-206ENST00000597811 GCNT1Q02742 428 aa16.3■□□□□ 0.2
XRCC1-206ENST00000597811 TAF10Q12962 218 aa16.3■□□□□ 0.2
XRCC1-206ENST00000597811 GOLGA7BQ2TAP0 167 aa16.3■□□□□ 0.2
XRCC1-206ENST00000597811 ZC3H14Q6PJT7 736 aaKnown RBP16.3■□□□□ 0.2
XRCC1-206ENST00000597811 RBBP8NLQ8NC74 664 aaPredicted RBP16.3■□□□□ 0.2
XRCC1-206ENST00000597811 SCAMP5Q8TAC9 235 aa16.3■□□□□ 0.2
XRCC1-206ENST00000597811 FAM83CQ9BQN1 747 aa16.3■□□□□ 0.2
XRCC1-206ENST00000597811 KIF9Q9HAQ2 790 aa16.3■□□□□ 0.2
XRCC1-206ENST00000597811 THG1LQ9NWX6 298 aaKnown RBP16.3■□□□□ 0.2
XRCC1-206ENST00000597811 TRAV19A0A0A6YYK7 116 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 GTPBP10A4D1E9 387 aaKnown RBP16.29■□□□□ 0.2
XRCC1-206ENST00000597811 C2orf78A6NCI8 922 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 SMTNL1A8MU46 457 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 BECN2A8MW95 431 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 LMNAP02545 664 aaKnown RBP16.29■□□□□ 0.2
XRCC1-206ENST00000597811 VDRP11473 427 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 ACO1P21399 889 aaKnown RBP16.29■□□□□ 0.2
XRCC1-206ENST00000597811 GAS6Q14393 721 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 ZNF268Q14587 947 aaPredicted RBP16.29■□□□□ 0.2
XRCC1-206ENST00000597811 FKBP15Q5T1M5 1219 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 TRIM68Q6AZZ1 485 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 GJB7Q6PEY0 223 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 C1orf228Q6PIY5 440 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 CLEC20AQ6ZU45 233 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 RALGPS2Q86X27 583 aaPredicted RBP16.29■□□□□ 0.2
XRCC1-206ENST00000597811 PDZD8Q8NEN9 1154 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 FAM81BQ96LP2 452 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 PCMTD1Q96MG8 357 aaPredicted RBP16.29■□□□□ 0.2
XRCC1-206ENST00000597811 CYP2S1Q96SQ9 504 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 DUSP16Q9BY84 665 aa16.29■□□□□ 0.2
XRCC1-206ENST00000597811 SEMA4AQ9H3S1 761 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms