RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 GDF7Q7Z4P5 450 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 RASGRP3Q8IV61 690 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 SLC44A2Q8IWA5 706 aaPredicted RBP7.27□□□□□ -1.25
VMP1-215ENST00000592619 CCDC117Q8IWD4 279 aaPredicted RBP7.27□□□□□ -1.25
VMP1-215ENST00000592619 COLGALT2Q8IYK4 626 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 NRSN1Q8IZ57 195 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 FAM109AQ8N4B1 249 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 ZNF808Q8N4W9 903 aaPredicted RBP7.27□□□□□ -1.25
VMP1-215ENST00000592619 NAXEQ8NCW5 288 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 FEZF2Q8TBJ5 459 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 SDCCAG3Q96C92 435 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 MPP4Q96JB8 637 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 PPM1MQ96MI6 270 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 ZSWIM1Q9BR11 485 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 RTKNQ9BST9 563 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 MLXIPQ9HAP2 919 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 DNAJB11Q9UBS4 358 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 EIF2B4Q9UI10 523 aaKnown RBP7.27□□□□□ -1.25
VMP1-215ENST00000592619 VPS51Q9UID3 782 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 WDR7Q9Y4E6 1490 aa7.27□□□□□ -1.25
VMP1-215ENST00000592619 PCF11O94913 1555 aaKnown RBP7.27□□□□□ -1.25
VMP1-215ENST00000592619 ATP10BO94823 1461 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 FYCO1Q9BQS8 1478 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 KRTAP23-1A1A580 65 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 MYADML2A6NDP7 307 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 RRN3P2A6NIE6 340 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 ERN1O75460 977 aaKnown RBP7.26□□□□□ -1.25
VMP1-215ENST00000592619 CFIP05156 583 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 ANXA6P08133 673 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 ADD2P35612 726 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 ALDH18A1P54886 795 aaKnown RBP7.26□□□□□ -1.25
VMP1-215ENST00000592619 AP2B1P63010 937 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 CNGB1Q14028 1251 aaPredicted RBP7.26□□□□□ -1.25
VMP1-215ENST00000592619 CCNIQ14094 377 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 PTCHD3Q3KNS1 767 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 ADCK5Q3MIX3 580 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 CERCAMQ5T4B2 595 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 ERICH6BQ5W0A0 696 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 ABLIM2Q6H8Q1 611 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 SLC15A3Q8IY34 581 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 TMEM132CQ8N3T6 1108 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.26□□□□□ -1.25
VMP1-215ENST00000592619 CXorf38Q8TB03 319 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 DNAJB14Q8TBM8 379 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 Q8TCH9 128 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 THAP4Q8WY91 577 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 RUBCNQ92622 972 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 LPAR3Q9UBY5 353 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 FPGT-TNNI3KV9GXZ4 949 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 ADAMTS20P59510 1910 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 CASKIN1Q8WXD9 1431 aa7.26□□□□□ -1.25
VMP1-215ENST00000592619 CCDC18Q5T9S5 1454 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 LRRIQ1Q96JM4 1722 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 DNPH1O43598 174 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 TRIAP1O43715 76 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 RPS6KA4O75676 772 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 RECQL4O94761 1208 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 USP1O94782 785 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 CSF1RP07333 972 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 C8AP07357 584 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 HSP90AA1P07900 732 aaKnown RBP7.25□□□□□ -1.25
VMP1-215ENST00000592619 ACO1P21399 889 aaKnown RBP7.25□□□□□ -1.25
VMP1-215ENST00000592619 BCAT1P54687 386 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 GPS1Q13098 491 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 GLIPR1L2Q4G1C9 344 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 ATPAF1Q5TC12 328 aaPredicted RBP7.25□□□□□ -1.25
VMP1-215ENST00000592619 ARHGAP40Q5TG30 622 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 ICE2Q659A1 982 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 B3GNTL1Q67FW5 361 aaPredicted RBP7.25□□□□□ -1.25
VMP1-215ENST00000592619 ZNF280DQ6N043 979 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 LIMS2Q7Z4I7 341 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 PCGF5Q86SE9 256 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 HERC6Q8IVU3 1022 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 ADGRG5Q8IZF4 528 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 MBD3L2Q8NHZ7 208 aaPredicted RBP7.25□□□□□ -1.25
VMP1-215ENST00000592619 ABHD5Q8WTS1 349 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 EDAQ92838 391 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 BOD1Q96IK1 185 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 EIF2AK1Q9BQI3 630 aaKnown RBP7.25□□□□□ -1.25
VMP1-215ENST00000592619 NUDT22Q9BRQ3 303 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 XYLT2Q9H1B5 865 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 GBA2Q9HCG7 927 aaPredicted RBP7.25□□□□□ -1.25
VMP1-215ENST00000592619 FBXO9Q9UK97 447 aaPredicted RBP7.25□□□□□ -1.25
VMP1-215ENST00000592619 MAP3K4Q9Y6R4 1608 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 EPRSP07814 1512 aaKnown RBP7.25□□□□□ -1.25
VMP1-215ENST00000592619 CFAP43Q8NDM7 1665 aa7.25□□□□□ -1.25
VMP1-215ENST00000592619 GAGE12BA1L429 117 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 GAGE12HA6NDE8 117 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 MARCH11A6NNE9 402 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 AHRRA9YTQ3 701 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 B9A039 149 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 F5H697 171 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 DHHO43323 396 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 SRGAP2BP0DMP2 458 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 ZSCAN22P10073 491 aaPredicted RBP7.24□□□□□ -1.25
VMP1-215ENST00000592619 CD6P30203 668 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 PRKAR1BP31321 381 aa7.24□□□□□ -1.25
VMP1-215ENST00000592619 HIBADHP31937 336 aaKnown RBP7.24□□□□□ -1.25
VMP1-215ENST00000592619 COPB2P35606 906 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms