RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 CCDC60Q8IWA6 550 aaPredicted RBP11.87□□□□□ -0.51
SEH1L-208ENST00000590843 C1orf131Q8NDD1 294 aaKnown RBP11.87□□□□□ -0.51
SEH1L-208ENST00000590843 SETD7Q8WTS6 366 aaKnown RBP11.87□□□□□ -0.51
SEH1L-208ENST00000590843 RAPGEF5Q92565 580 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 STK33Q9BYT3 514 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 FANCFQ9NPI8 374 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 MAFFQ9ULX9 164 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 EPN1Q9Y6I3 576 aaPredicted RBP11.87□□□□□ -0.51
SEH1L-208ENST00000590843 CSF2RAP15509 400 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 MSH2P43246 934 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 TP53BP2Q13625 1128 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 PTK6Q13882 451 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 ZNF618Q5T7W0 954 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 TTC39BQ5VTQ0 682 aaPredicted RBP11.87□□□□□ -0.51
SEH1L-208ENST00000590843 GDAP1L1Q96MZ0 367 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 PRDM16Q9HAZ2 1276 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 SLC2A4RGQ9NR83 387 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 ZNF711Q9Y462 761 aa11.87□□□□□ -0.51
SEH1L-208ENST00000590843 NT5C1B-RDH14C9J2C7 533 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 RTN2O75298 545 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 ZSCAN30Q86W11 494 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 ZNF248Q8NDW4 579 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 FBXL18Q96ME1 805 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 FAM107BQ9H098 131 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 POLD4Q9HCU8 107 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 PHPT1Q9NRX4 125 aaPredicted RBP11.86□□□□□ -0.51
SEH1L-208ENST00000590843 CRYL1Q9Y2S2 319 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 CIB2O75838 187 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 FGF18O76093 207 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 ARID5BQ14865 1188 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 GPR135Q8IZ08 494 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 BRD8Q9H0E9 1235 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 FANCLQ9NW38 375 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 AAR2Q9Y312 384 aaKnown RBP11.86□□□□□ -0.51
SEH1L-208ENST00000590843 PCDHAC2Q9Y5I4 1007 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 LACTBL1A8MY62 500 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 ATP2C2O75185 946 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 LSM8O95777 96 aaKnown RBP11.86□□□□□ -0.51
SEH1L-208ENST00000590843 HDAC4P56524 1084 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 GFPT1Q06210 699 aaPredicted RBP11.86□□□□□ -0.51
SEH1L-208ENST00000590843 NAA25Q14CX7 972 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 ZRANB3Q5FWF4 1079 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 TCP11X2Q5H9J9 407 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 PPP4R4Q6NUP7 873 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 UBA3Q8TBC4 463 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 DNAJC1Q96KC8 554 aaKnown RBP11.86□□□□□ -0.51
SEH1L-208ENST00000590843 INTS7Q9NVH2 962 aaKnown RBP11.86□□□□□ -0.51
SEH1L-208ENST00000590843 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.86□□□□□ -0.51
SEH1L-208ENST00000590843 NALCNQ8IZF0 1738 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 PTPN1P18031 435 aaKnown RBP11.86□□□□□ -0.51
SEH1L-208ENST00000590843 PHLDB2Q86SQ0 1253 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 TRIB2Q92519 343 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 KCNB2Q92953 911 aa11.86□□□□□ -0.51
SEH1L-208ENST00000590843 PRR5-ARHGAP8B1AHC4 643 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 GOLGA8TH3BQL2 631 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 PALMO75781 387 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 PAEPP09466 180 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 BDNFP23560 247 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 RCOR2Q8IZ40 523 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 KIAA0319LQ8IZA0 1049 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 TAB3Q8N5C8 712 aaPredicted RBP11.85□□□□□ -0.51
SEH1L-208ENST00000590843 GMLQ99445 158 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 AGPAT3Q9NRZ7 376 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 PSD3Q9NYI0 1048 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 AIPL1Q9NZN9 384 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 CFAP97Q9P2B7 532 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 SLC27A6Q9Y2P4 619 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 DYRK1BQ9Y463 629 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.85□□□□□ -0.51
SEH1L-208ENST00000590843 TSPAN3O60637 253 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 TROVE2P10155 538 aaKnown RBP eCLIP11.85□□□□□ -0.51
SEH1L-208ENST00000590843 ITGB6P18564 788 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 U2AF2P26368 475 aaKnown RBP eCLIP11.85□□□□□ -0.513e-12■■□□□ 14.1
SEH1L-208ENST00000590843 SPIRE1Q08AE8 756 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 DGKKQ5KSL6 1271 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 MAB21L3Q8N8X9 362 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 SUN3Q8TAQ9 357 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 LPPQ93052 612 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 FAR2Q96K12 515 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 SEPT3Q9UH03 358 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 PGRMC1O00264 195 aaKnown RBP11.85□□□□□ -0.51
SEH1L-208ENST00000590843 PDAP1Q13442 181 aaKnown RBP11.85□□□□□ -0.51
SEH1L-208ENST00000590843 LBRQ14739 615 aaKnown RBP11.85□□□□□ -0.51
SEH1L-208ENST00000590843 C7orf43Q8WVR3 580 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 CNPY3Q9BT09 278 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 ZNF576Q9H609 170 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 GPRC5CQ9NQ84 441 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 CCDC78A2IDD5 438 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 HMGB3O15347 200 aaKnown RBP11.85□□□□□ -0.51
SEH1L-208ENST00000590843 SERPINF2P08697 491 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 OR1E1P30953 314 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 RAP1GDS1P52306 607 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 SEC23AQ15436 765 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 TCEA2Q15560 299 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 CHMP1BQ7LBR1 199 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 SLFN11Q7Z7L1 901 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 ECHDC2Q86YB7 292 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 MAFAQ8NHW3 353 aaPredicted RBP11.85□□□□□ -0.51
SEH1L-208ENST00000590843 AGPAT1Q99943 283 aa11.85□□□□□ -0.51
SEH1L-208ENST00000590843 ARFGAP3Q9NP61 516 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms