RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 MICAL3Q7RTP6 2002 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 TCRBV7S2A1N4TA0A589 114 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CHUKO15111 745 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 HUS1O60921 280 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 EN2P19622 333 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 TUSC3Q13454 348 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 UPP1Q16831 310 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 NOMO2Q5JPE7 1267 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 PHF13Q86YI8 300 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 KATNAL2Q8IYT4 538 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 RIBC1Q8N443 379 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 APPL2Q8NEU8 664 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 OR6B3Q8NGW1 331 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 MDM1Q8TC05 714 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 IPO4Q8TEX9 1081 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CPA5Q8WXQ8 436 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CCDC77Q9BR77 488 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 NT5C1AQ9BXI3 368 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 DCLK3Q9C098 648 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CDC42EP4Q9H3Q1 356 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 LRFN2Q9ULH4 789 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 MKI67P46013 3256 aaKnown RBP15.71■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TRIM43BA6NCK2 446 aa15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TP73O15350 636 aa15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 MNAT1P51948 309 aa15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 IFI35P80217 286 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 KLF1Q13351 362 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CNGA2Q16280 664 aa15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 FAM43BQ6ZT52 329 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 MON1BQ7L1V2 547 aa15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 GBP7Q8N8V2 638 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 EXD1Q8NHP7 514 aa15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 URGCPQ8TCY9 931 aa15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 KBTBD7Q8WVZ9 684 aa15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TRIM43Q96BQ3 446 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 DDX27Q96GQ7 796 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 HEXIM2Q96MH2 286 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 YY1AP1Q9H869 796 aa15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ASIC3Q9UHC3 531 aa15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 NME7Q9Y5B8 376 aa15.7■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CYB561D2O14569 222 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ITGB8P26012 769 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 SCTRP47872 440 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 KCNJ1P48048 391 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 C1QBPQ07021 282 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 DRICH1Q6PGQ1 229 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 LIMS2Q7Z4I7 341 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 EXOC3L1Q86VI1 746 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ZNF280BQ86YH2 543 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TOP6BLQ8N6T0 577 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 SGSM3Q96HU1 749 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 BTBD6Q96KE9 485 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 SENP8Q96LD8 212 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 LRRC4CQ9HCJ2 640 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 SLC40A1Q9NP59 571 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 AAASQ9NRG9 546 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 LGALS13Q9UHV8 139 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 NEU2Q9Y3R4 380 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 A8MXQ7 604 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 MED7O43513 233 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 HCRTO43612 131 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 DDHD2O94830 711 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TIMP1P01033 207 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 VDRP11473 427 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ATF2P15336 505 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 GATMP50440 423 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 NOMO3P69849 1222 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 NR1H3Q13133 447 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 STAT4Q14765 748 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PAN2Q504Q3 1202 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PLEKHA7Q6IQ23 1121 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 CNKSR3Q6P9H4 555 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 DSTYKQ6XUX3 929 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 DPH6Q7L8W6 267 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ACOT1Q86TX2 421 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ABI1Q8IZP0 508 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 EPS8L3Q8TE67 593 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 VWCEQ96DN2 955 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 UROC1Q96N76 676 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 SNX25Q9H3E2 840 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PPCSQ9HAB8 311 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 TBC1D13Q9NVG8 400 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 KANSL3Q9P2N6 904 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ANAPC5Q9UJX4 755 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PCDHGC3Q9UN70 934 aa15.69■□□□□ 0.1
CDK5RAP3-236ENST00000584991 B4GALT3O60512 393 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 B3GAT3O94766 335 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ABHD2P08910 425 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 PDGFRBP09619 1106 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 RRM1P23921 792 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 LMO2P25791 158 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 RFC2P35250 354 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 GNL1P36915 607 aaPredicted RBP15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 COPS2P61201 443 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 RNASELQ05823 741 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 IKBKEQ14164 716 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 UNC93AQ86WB7 457 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 ADGRF2Q8IZF7 708 aa15.68■□□□□ 0.1
CDK5RAP3-236ENST00000584991 FUKQ8N0W3 1084 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms